RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 SOS2Q07890 1332 aaPredicted RBP19.33■□□□□ 0.68
CCHCR1-201ENST00000376266 GLIPR1L2Q4G1C9 344 aa19.32■□□□□ 0.68
CCHCR1-201ENST00000376266 NPC1L1Q9UHC9 1359 aa19.31■□□□□ 0.68
CCHCR1-201ENST00000376266 NHSL1Q5SYE7 1610 aa19.31■□□□□ 0.68
CCHCR1-201ENST00000376266 TRPM3Q9HCF6 1732 aaPredicted RBP19.31■□□□□ 0.68
CCHCR1-201ENST00000376266 PLEKHG5O94827 1062 aa19.3■□□□□ 0.68
CCHCR1-201ENST00000376266 NLRP6P59044 892 aa19.3■□□□□ 0.68
CCHCR1-201ENST00000376266 TNNT2P45379 298 aaPredicted RBP19.3■□□□□ 0.68
CCHCR1-201ENST00000376266 MORC1Q86VD1 984 aa19.29■□□□□ 0.68
CCHCR1-201ENST00000376266 PIK3C2AO00443 1686 aa19.29■□□□□ 0.68
CCHCR1-201ENST00000376266 KIF20BQ96Q89 1820 aa19.29■□□□□ 0.68
CCHCR1-201ENST00000376266 SBNO1A3KN83 1393 aa19.29■□□□□ 0.68
CCHCR1-201ENST00000376266 NSD2O96028 1365 aa19.29■□□□□ 0.68
CCHCR1-201ENST00000376266 SPATA31A3Q5VYP0 1347 aa19.28■□□□□ 0.68
CCHCR1-201ENST00000376266 RGS3P49796 1198 aa19.28■□□□□ 0.68
CCHCR1-201ENST00000376266 COG3Q96JB2 828 aa19.28■□□□□ 0.68
CCHCR1-201ENST00000376266 RRAGDQ9NQL2 400 aaPredicted RBP19.28■□□□□ 0.68
CCHCR1-201ENST00000376266 AHDC1Q5TGY3 1603 aaPredicted RBP19.27■□□□□ 0.68
CCHCR1-201ENST00000376266 TNS3Q68CZ2 1445 aa19.27■□□□□ 0.68
CCHCR1-201ENST00000376266 PARD3Q8TEW0 1356 aa19.27■□□□□ 0.67
CCHCR1-201ENST00000376266 FBLN1P23142 703 aa19.26■□□□□ 0.67
CCHCR1-201ENST00000376266 SOX12O15370 315 aa19.25■□□□□ 0.67
CCHCR1-201ENST00000376266 OVOS2A0A0J9YW53 1432 aa19.25■□□□□ 0.67
CCHCR1-201ENST00000376266 OVOS2Q6IE36 1432 aa19.25■□□□□ 0.67
CCHCR1-201ENST00000376266 L1TD1Q5T7N2 865 aaKnown RBP19.25■□□□□ 0.67
CCHCR1-201ENST00000376266 ALS2Q96Q42 1657 aa19.25■□□□□ 0.67
CCHCR1-201ENST00000376266 USP31Q70CQ4 1352 aa19.25■□□□□ 0.67
CCHCR1-201ENST00000376266 LRRC59Q96AG4 307 aaKnown RBP19.24■□□□□ 0.67
CCHCR1-201ENST00000376266 PHLPP1O60346 1717 aa19.24■□□□□ 0.67
CCHCR1-201ENST00000376266 ANKRD26Q9UPS8 1709 aa19.22■□□□□ 0.67
CCHCR1-201ENST00000376266 CABLES1Q8TDN4 633 aa19.22■□□□□ 0.67
CCHCR1-201ENST00000376266 ARHGEF10O15013 1369 aa19.22■□□□□ 0.67
CCHCR1-201ENST00000376266 COL16A1Q07092 1604 aaPredicted RBP19.21■□□□□ 0.67
CCHCR1-201ENST00000376266 MARF1Q9Y4F3 1742 aaKnown RBP19.21■□□□□ 0.67
CCHCR1-201ENST00000376266 PPP2R1AP30153 589 aa19.21■□□□□ 0.66
CCHCR1-201ENST00000376266 BLMP54132 1417 aaPredicted RBP19.2■□□□□ 0.66
CCHCR1-201ENST00000376266 HSPA1LP34931 641 aa19.19■□□□□ 0.66
CCHCR1-201ENST00000376266 RRS1Q15050 365 aaKnown RBP19.19■□□□□ 0.66
CCHCR1-201ENST00000376266 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.19■□□□□ 0.66
CCHCR1-201ENST00000376266 NAP1L5Q96NT1 182 aaPredicted RBP19.19■□□□□ 0.66
CCHCR1-201ENST00000376266 USP19O94966 1318 aa19.18■□□□□ 0.66
CCHCR1-201ENST00000376266 GCP02774 474 aa19.18■□□□□ 0.66
CCHCR1-201ENST00000376266 VSIG10Q8N0Z9 540 aa19.18■□□□□ 0.66
CCHCR1-201ENST00000376266 INSRP06213 1382 aa19.18■□□□□ 0.66
CCHCR1-201ENST00000376266 MED1Q15648 1581 aaPredicted RBP19.18■□□□□ 0.66
CCHCR1-201ENST00000376266 BECN1Q14457 450 aa19.17■□□□□ 0.66
CCHCR1-201ENST00000376266 USP54Q70EL1 1684 aa19.17■□□□□ 0.66
CCHCR1-201ENST00000376266 SLKQ9H2G2 1235 aaPredicted RBP19.16■□□□□ 0.66
CCHCR1-201ENST00000376266 MTHFSP49914 203 aa19.16■□□□□ 0.66
CCHCR1-201ENST00000376266 POLKQ9UBT6 870 aa19.16■□□□□ 0.66
CCHCR1-201ENST00000376266 EMILIN1Q9Y6C2 1016 aa19.16■□□□□ 0.66
CCHCR1-201ENST00000376266 PNPLA6Q8IY17 1366 aa19.16■□□□□ 0.66
CCHCR1-201ENST00000376266 KCNH5Q8NCM2 988 aa19.15■□□□□ 0.66
CCHCR1-201ENST00000376266 ARXQ96QS3 562 aa19.15■□□□□ 0.66
CCHCR1-201ENST00000376266 PNNQ9H307 717 aaKnown RBP19.15■□□□□ 0.66
CCHCR1-201ENST00000376266 AATKQ6ZMQ8 1374 aa19.14■□□□□ 0.65
CCHCR1-201ENST00000376266 SLIT3O75094 1523 aa19.14■□□□□ 0.65
CCHCR1-201ENST00000376266 ZC3H6P61129 1189 aaKnown RBP19.14■□□□□ 0.65
CCHCR1-201ENST00000376266 ZMYND15Q9H091 742 aa19.14■□□□□ 0.65
CCHCR1-201ENST00000376266 ZBTB7CA1YPR0 619 aa19.13■□□□□ 0.65
CCHCR1-201ENST00000376266 HAP1P54257 671 aaPredicted RBP19.13■□□□□ 0.65
CCHCR1-201ENST00000376266 MAP2P11137 1827 aaKnown RBP19.13■□□□□ 0.65
CCHCR1-201ENST00000376266 HSP90AA2PQ14568 343 aaPredicted RBP19.13■□□□□ 0.65
CCHCR1-201ENST00000376266 MAP3K19Q56UN5 1328 aa19.13■□□□□ 0.65
CCHCR1-201ENST00000376266 NFAT5O94916 1531 aa19.12■□□□□ 0.65
CCHCR1-201ENST00000376266 DUSP27Q5VZP5 1158 aa19.12■□□□□ 0.65
CCHCR1-201ENST00000376266 CRYBG1Q9Y4K1 1723 aa19.11■□□□□ 0.65
CCHCR1-201ENST00000376266 HSP90AA1P07900 732 aaKnown RBP19.11■□□□□ 0.65
CCHCR1-201ENST00000376266 PHRF1Q9P1Y6 1649 aaKnown RBP19.11■□□□□ 0.65
CCHCR1-201ENST00000376266 ADAMTS8Q9UP79 889 aa19.11■□□□□ 0.65
CCHCR1-201ENST00000376266 JCADQ9P266 1359 aa19.1■□□□□ 0.65
CCHCR1-201ENST00000376266 ARHGEF25Q86VW2 580 aa19.09■□□□□ 0.65
CCHCR1-201ENST00000376266 FBXO41Q8TF61 875 aa19.09■□□□□ 0.65
CCHCR1-201ENST00000376266 GOLGA6L3A6NEY3 463 aa19.09■□□□□ 0.65
CCHCR1-201ENST00000376266 XRCC6P12956 609 aaKnown RBP eCLIP19.09■□□□□ 0.65
CCHCR1-201ENST00000376266 AMPHP49418 695 aa19.09■□□□□ 0.65
CCHCR1-201ENST00000376266 COL22A1Q8NFW1 1626 aaPredicted RBP19.09■□□□□ 0.65
CCHCR1-201ENST00000376266 NUTM2BA6NNL0 878 aaPredicted RBP19.08■□□□□ 0.65
CCHCR1-201ENST00000376266 NUTM2EB1AL46 878 aaPredicted RBP19.08■□□□□ 0.65
CCHCR1-201ENST00000376266 NUTM2AQ8IVF1 878 aaPredicted RBP19.08■□□□□ 0.65
CCHCR1-201ENST00000376266 RRP9O43818 475 aaKnown RBP19.08■□□□□ 0.64
CCHCR1-201ENST00000376266 CLCN1P35523 988 aa19.08■□□□□ 0.64
CCHCR1-201ENST00000376266 GOLGA2Q08379 1002 aa19.08■□□□□ 0.64
CCHCR1-201ENST00000376266 SEC24BO95487 1268 aa19.07■□□□□ 0.64
CCHCR1-201ENST00000376266 KIAA0232Q92628 1395 aa19.07■□□□□ 0.64
CCHCR1-201ENST00000376266 ABCA3Q99758 1704 aa19.07■□□□□ 0.64
CCHCR1-201ENST00000376266 CHRNA2Q15822 529 aa19.07■□□□□ 0.64
CCHCR1-201ENST00000376266 HSP90AB2PQ58FF8 381 aa19.07■□□□□ 0.64
CCHCR1-201ENST00000376266 LTN1O94822 1766 aa19.06■□□□□ 0.64
CCHCR1-201ENST00000376266 PEAK1Q9H792 1746 aa19.06■□□□□ 0.64
CCHCR1-201ENST00000376266 SHPRHQ149N8 1683 aa19.06■□□□□ 0.64
CCHCR1-201ENST00000376266 VIRMAQ69YN4 1812 aaKnown RBP19.05■□□□□ 0.64
CCHCR1-201ENST00000376266 ADAMTS2O95450 1211 aa19.05■□□□□ 0.64
CCHCR1-201ENST00000376266 HOXC9P31274 260 aa19.05■□□□□ 0.64
CCHCR1-201ENST00000376266 PRDM11Q9NQV5 511 aa19.05■□□□□ 0.64
CCHCR1-201ENST00000376266 WDR43Q15061 677 aaKnown RBP eCLIP19.04■□□□□ 0.64
CCHCR1-201ENST00000376266 CFAP53Q96M91 514 aa19.04■□□□□ 0.64
CCHCR1-201ENST00000376266 FLT4P35916 1363 aa19.04■□□□□ 0.64
CCHCR1-201ENST00000376266 ANTXR1Q9H6X2 564 aa19.04■□□□□ 0.64
CCHCR1-201ENST00000376266 AXIN2Q9Y2T1 843 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms