RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 TAX1BP1Q86VP1 789 aa11.59□□□□□ -0.55
SPEN-201ENST00000375759 AKNAQ7Z591 1439 aa11.59□□□□□ -0.55
SPEN-201ENST00000375759 SMARCA4P51532 1647 aa11.59□□□□□ -0.55
SPEN-201ENST00000375759 CCDC148Q8NFR7 591 aa11.59□□□□□ -0.55
SPEN-201ENST00000375759 SLC26A8Q96RN1 970 aa11.59□□□□□ -0.55
SPEN-201ENST00000375759 TMCO3Q6UWJ1 677 aa11.59□□□□□ -0.55
SPEN-201ENST00000375759 ERICH4A6NGS2 130 aa11.59□□□□□ -0.55
SPEN-201ENST00000375759 CRACR2AQ9BSW2 395 aa11.59□□□□□ -0.55
SPEN-201ENST00000375759 DNAJC2Q99543 621 aaKnown RBP11.59□□□□□ -0.55
SPEN-201ENST00000375759 SMG6Q86US8 1419 aaKnown RBP11.58□□□□□ -0.55
SPEN-201ENST00000375759 GIMAP7Q8NHV1 300 aa11.58□□□□□ -0.56
SPEN-201ENST00000375759 UPF3BQ9BZI7 483 aaKnown RBP11.58□□□□□ -0.56
SPEN-201ENST00000375759 EPB41L2O43491 1005 aaKnown RBP11.58□□□□□ -0.56
SPEN-201ENST00000375759 MSH5O43196 834 aa11.58□□□□□ -0.56
SPEN-201ENST00000375759 FAM193AP78312 1265 aa11.58□□□□□ -0.56
SPEN-201ENST00000375759 TCP11L2Q8N4U5 519 aa11.58□□□□□ -0.56
SPEN-201ENST00000375759 SHTN1A0MZ66 631 aa11.58□□□□□ -0.56
SPEN-201ENST00000375759 FAM107BQ9H098 131 aa11.58□□□□□ -0.56
SPEN-201ENST00000375759 NOB1Q9ULX3 412 aaKnown RBP11.58□□□□□ -0.56
SPEN-201ENST00000375759 ZSCAN31Q96LW9 406 aaPredicted RBP11.58□□□□□ -0.56
SPEN-201ENST00000375759 KIF21BO75037 1637 aa11.58□□□□□ -0.56
SPEN-201ENST00000375759 CCDC158Q5M9N0 1113 aa11.57□□□□□ -0.56
SPEN-201ENST00000375759 TMEM132AQ24JP5 1023 aa11.57□□□□□ -0.56
SPEN-201ENST00000375759 MAP3K11Q16584 847 aa11.57□□□□□ -0.56
SPEN-201ENST00000375759 NOL7Q9UMY1 257 aaKnown RBP11.57□□□□□ -0.56
SPEN-201ENST00000375759 MTHFSP49914 203 aa11.57□□□□□ -0.56
SPEN-201ENST00000375759 KIAA1328Q86T90 577 aa11.57□□□□□ -0.56
SPEN-201ENST00000375759 ZNF397Q8NF99 534 aaPredicted RBP11.57□□□□□ -0.56
SPEN-201ENST00000375759 CALCOCO1Q9P1Z2 691 aa11.57□□□□□ -0.56
SPEN-201ENST00000375759 ARHGAP29Q52LW3 1261 aa11.57□□□□□ -0.56
SPEN-201ENST00000375759 KIF18AQ8NI77 898 aa11.57□□□□□ -0.56
SPEN-201ENST00000375759 JPH4Q96JJ6 628 aa11.57□□□□□ -0.56
SPEN-201ENST00000375759 NACAP1Q9BZK3 213 aa11.57□□□□□ -0.56
SPEN-201ENST00000375759 DDX11Q96FC9 970 aa11.57□□□□□ -0.56
SPEN-201ENST00000375759 GNL3LQ9NVN8 582 aaKnown RBP11.57□□□□□ -0.56
SPEN-201ENST00000375759 TANGO6Q9C0B7 1094 aa11.57□□□□□ -0.56
SPEN-201ENST00000375759 KIF6Q6ZMV9 814 aa11.57□□□□□ -0.56
SPEN-201ENST00000375759 PDCL3Q9H2J4 239 aa11.56□□□□□ -0.56
SPEN-201ENST00000375759 PPP6R1Q9UPN7 881 aa11.56□□□□□ -0.56
SPEN-201ENST00000375759 CCDC69A6NI79 296 aa11.56□□□□□ -0.56
SPEN-201ENST00000375759 KRT32Q14532 448 aa11.56□□□□□ -0.56
SPEN-201ENST00000375759 JAKMIP3Q5VZ66 844 aa11.56□□□□□ -0.56
SPEN-201ENST00000375759 ZSCAN12O43309 604 aa11.56□□□□□ -0.56
SPEN-201ENST00000375759 TWISTNBQ3B726 338 aaPredicted RBP11.56□□□□□ -0.56
SPEN-201ENST00000375759 PTPN14Q15678 1187 aa11.56□□□□□ -0.56
SPEN-201ENST00000375759 IMMTQ16891 758 aaKnown RBP11.56□□□□□ -0.56
SPEN-201ENST00000375759 TTC39AQ5SRH9 613 aa11.56□□□□□ -0.56
SPEN-201ENST00000375759 SAMD1Q6SPF0 538 aaPredicted RBP11.56□□□□□ -0.56
SPEN-201ENST00000375759 CCDC91Q7Z6B0 441 aa11.56□□□□□ -0.56
SPEN-201ENST00000375759 CHD1LQ86WJ1 897 aa11.56□□□□□ -0.56
SPEN-201ENST00000375759 BLOC1S2Q6QNY1 142 aa11.55□□□□□ -0.56
SPEN-201ENST00000375759 DESP17661 470 aa11.55□□□□□ -0.56
SPEN-201ENST00000375759 WDR63Q8IWG1 891 aa11.55□□□□□ -0.56
SPEN-201ENST00000375759 ZSCAN25Q6NSZ9 544 aa11.55□□□□□ -0.56
SPEN-201ENST00000375759 LRRC9Q6ZRR7 1453 aa11.55□□□□□ -0.56
SPEN-201ENST00000375759 CDCA7LQ96GN5 454 aa11.55□□□□□ -0.56
SPEN-201ENST00000375759 SFPQP23246 707 aaKnown RBP eCLIP11.55□□□□□ -0.56
SPEN-201ENST00000375759 MVPQ14764 893 aaKnown RBP11.55□□□□□ -0.56
SPEN-201ENST00000375759 PAF1Q8N7H5 531 aa11.55□□□□□ -0.56
SPEN-201ENST00000375759 BMP2KQ9NSY1 1161 aaPredicted RBP11.55□□□□□ -0.56
SPEN-201ENST00000375759 CGNQ9P2M7 1197 aaKnown RBP11.55□□□□□ -0.56
SPEN-201ENST00000375759 MTMR7Q9Y216 660 aa11.55□□□□□ -0.56
SPEN-201ENST00000375759 KDM4AO75164 1064 aa11.55□□□□□ -0.56
SPEN-201ENST00000375759 PPP2R1AP30153 589 aa11.55□□□□□ -0.56
SPEN-201ENST00000375759 TAF4BQ92750 862 aa11.54□□□□□ -0.56
SPEN-201ENST00000375759 C1orf115Q9H7X2 142 aa11.54□□□□□ -0.56
SPEN-201ENST00000375759 SUPT6HQ7KZ85 1726 aaKnown RBP11.54□□□□□ -0.56
SPEN-201ENST00000375759 STK3Q13188 491 aa11.54□□□□□ -0.56
SPEN-201ENST00000375759 WASF1Q92558 559 aa11.54□□□□□ -0.56
SPEN-201ENST00000375759 FILIP1Q7Z7B0 1213 aa11.54□□□□□ -0.56
SPEN-201ENST00000375759 CEP131Q9UPN4 1083 aa11.54□□□□□ -0.56
SPEN-201ENST00000375759 PLEKHH1Q9ULM0 1364 aa11.54□□□□□ -0.56
SPEN-201ENST00000375759 ATF7IPQ6VMQ6 1270 aa11.54□□□□□ -0.56
SPEN-201ENST00000375759 SYCE3A1L190 88 aa11.54□□□□□ -0.56
SPEN-201ENST00000375759 CCDC57Q2TAC2 916 aa11.53□□□□□ -0.56
SPEN-201ENST00000375759 CFAP100Q494V2 611 aa11.53□□□□□ -0.56
SPEN-201ENST00000375759 MICALCLQ6ZW33 695 aa11.53□□□□□ -0.56
SPEN-201ENST00000375759 PDRG1Q9NUG6 133 aa11.53□□□□□ -0.56
SPEN-201ENST00000375759 MAP2K1Q02750 393 aaPredicted RBP11.53□□□□□ -0.56
SPEN-201ENST00000375759 CTNNA3Q9UI47 895 aa11.53□□□□□ -0.56
SPEN-201ENST00000375759 KIF5CO60282 957 aa11.53□□□□□ -0.56
SPEN-201ENST00000375759 EXOSC9Q06265 439 aaKnown RBP11.53□□□□□ -0.56
SPEN-201ENST00000375759 GGNBP2Q9H3C7 697 aa11.53□□□□□ -0.56
SPEN-201ENST00000375759 ANKRD50Q9ULJ7 1429 aa11.53□□□□□ -0.56
SPEN-201ENST00000375759 CCDC183Q5T5S1 534 aa11.53□□□□□ -0.56
SPEN-201ENST00000375759 CASQ1P31415 396 aa11.53□□□□□ -0.56
SPEN-201ENST00000375759 EIF5P55010 431 aaKnown RBP11.52□□□□□ -0.56
SPEN-201ENST00000375759 PLEKHH2Q8IVE3 1493 aa11.52□□□□□ -0.57
SPEN-201ENST00000375759 MPNDQ8N594 471 aa11.52□□□□□ -0.57
SPEN-201ENST00000375759 ZNF428Q96B54 188 aa11.52□□□□□ -0.57
SPEN-201ENST00000375759 PTPRGP23470 1445 aa11.51□□□□□ -0.57
SPEN-201ENST00000375759 CADPSQ9ULU8 1353 aa11.51□□□□□ -0.57
SPEN-201ENST00000375759 PRKAR2BP31323 418 aa11.51□□□□□ -0.57
SPEN-201ENST00000375759 CNNM1Q9NRU3 951 aa11.51□□□□□ -0.57
SPEN-201ENST00000375759 ZHX3Q9H4I2 956 aa11.51□□□□□ -0.57
SPEN-201ENST00000375759 GOLGA6L10A0A0M3HER8 536 aa11.51□□□□□ -0.57
SPEN-201ENST00000375759 PLEKHO1Q53GL0 409 aaPredicted RBP11.51□□□□□ -0.57
SPEN-201ENST00000375759 SOGA3Q5TF21 947 aa11.51□□□□□ -0.57
SPEN-201ENST00000375759 SLC4A2P04920 1241 aa11.51□□□□□ -0.57
SPEN-201ENST00000375759 SPA17Q15506 151 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms