RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 KCNA6P17658 529 aa19.19■□□□□ 0.66
MSH5-203ENST00000375750 NME9Q86XW9 330 aa19.19■□□□□ 0.66
MSH5-203ENST00000375750 NOB1Q9ULX3 412 aaKnown RBP19.18■□□□□ 0.66
MSH5-203ENST00000375750 XRCC6P12956 609 aaKnown RBP eCLIP19.18■□□□□ 0.66
MSH5-203ENST00000375750 CCDC27Q2M243 656 aa19.18■□□□□ 0.66
MSH5-203ENST00000375750 MCM4P33991 863 aa19.17■□□□□ 0.66
MSH5-203ENST00000375750 TRIM35Q9UPQ4 493 aa19.16■□□□□ 0.66
MSH5-203ENST00000375750 TMEM57Q8N5G2 664 aa19.16■□□□□ 0.66
MSH5-203ENST00000375750 EDC4Q6P2E9 1401 aaKnown RBP19.15■□□□□ 0.66
MSH5-203ENST00000375750 TMPOP42166 694 aaKnown RBP19.15■□□□□ 0.66
MSH5-203ENST00000375750 RBM33Q96EV2 1170 aaKnown RBP19.15■□□□□ 0.66
MSH5-203ENST00000375750 ACEP12821 1306 aa19.14■□□□□ 0.65
MSH5-203ENST00000375750 ZNF692Q9BU19 519 aaPredicted RBP19.14■□□□□ 0.65
MSH5-203ENST00000375750 CDC42BPGQ6DT37 1551 aa19.13■□□□□ 0.65
MSH5-203ENST00000375750 PTCH1Q13635 1447 aa19.13■□□□□ 0.65
MSH5-203ENST00000375750 PLEKHF1Q96S99 279 aa19.13■□□□□ 0.65
MSH5-203ENST00000375750 AAMPQ13685 434 aa19.13■□□□□ 0.65
MSH5-203ENST00000375750 LNPKQ9C0E8 428 aa19.13■□□□□ 0.65
MSH5-203ENST00000375750 POLKQ9UBT6 870 aa19.13■□□□□ 0.65
MSH5-203ENST00000375750 DIP2AQ14689 1571 aa19.13■□□□□ 0.65
MSH5-203ENST00000375750 KIF20BQ96Q89 1820 aa19.12■□□□□ 0.65
MSH5-203ENST00000375750 ADGRB2O60241 1585 aa19.12■□□□□ 0.65
MSH5-203ENST00000375750 ANKRD26Q9UPS8 1709 aa19.12■□□□□ 0.65
MSH5-203ENST00000375750 L1TD1Q5T7N2 865 aaKnown RBP19.12■□□□□ 0.65
MSH5-203ENST00000375750 ATF7IPQ6VMQ6 1270 aa19.12■□□□□ 0.65
MSH5-203ENST00000375750 SETD1BQ9UPS6 1966 aaKnown RBP19.11■□□□□ 0.65
MSH5-203ENST00000375750 GOLGA6L3A6NEY3 463 aa19.11■□□□□ 0.65
MSH5-203ENST00000375750 PLEKHG3A1L390 1219 aa19.11■□□□□ 0.65
MSH5-203ENST00000375750 TRAK2O60296 914 aa19.11■□□□□ 0.65
MSH5-203ENST00000375750 FOXD4L1Q9NU39 408 aa19.1■□□□□ 0.65
MSH5-203ENST00000375750 RIPK4P57078 832 aa19.1■□□□□ 0.65
MSH5-203ENST00000375750 COG3Q96JB2 828 aa19.1■□□□□ 0.65
MSH5-203ENST00000375750 CHMP5Q9NZZ3 219 aa19.1■□□□□ 0.65
MSH5-203ENST00000375750 EMILIN1Q9Y6C2 1016 aa19.1■□□□□ 0.65
MSH5-203ENST00000375750 DIAPH1O60610 1272 aaKnown RBP19.09■□□□□ 0.65
MSH5-203ENST00000375750 HDAC1Q13547 482 aaPredicted RBP19.09■□□□□ 0.65
MSH5-203ENST00000375750 C1orf115Q9H7X2 142 aa19.09■□□□□ 0.65
MSH5-203ENST00000375750 ZNF142P52746 1687 aaPredicted RBP19.09■□□□□ 0.65
MSH5-203ENST00000375750 COL3A1P02461 1466 aaPredicted RBP19.08■□□□□ 0.65
MSH5-203ENST00000375750 DDX19BQ9UMR2 479 aa19.08■□□□□ 0.65
MSH5-203ENST00000375750 XRN1Q8IZH2 1706 aaKnown RBP19.08■□□□□ 0.64
MSH5-203ENST00000375750 PIK3R4Q99570 1358 aa19.08■□□□□ 0.64
MSH5-203ENST00000375750 TTC21BQ7Z4L5 1316 aa19.08■□□□□ 0.64
MSH5-203ENST00000375750 FSD2A1L4K1 749 aa19.08■□□□□ 0.64
MSH5-203ENST00000375750 RRS1Q15050 365 aaKnown RBP19.08■□□□□ 0.64
MSH5-203ENST00000375750 ZBTB40Q9NUA8 1239 aa19.07■□□□□ 0.64
MSH5-203ENST00000375750 PNPLA6Q8IY17 1366 aa19.07■□□□□ 0.64
MSH5-203ENST00000375750 SMC5Q8IY18 1101 aa19.07■□□□□ 0.64
MSH5-203ENST00000375750 HSCBQ8IWL3 235 aa19.06■□□□□ 0.64
MSH5-203ENST00000375750 RSPH6AQ9H0K4 717 aa19.06■□□□□ 0.64
MSH5-203ENST00000375750 MON2Q7Z3U7 1717 aa19.06■□□□□ 0.64
MSH5-203ENST00000375750 THUMPD2Q9BTF0 503 aaKnown RBP19.06■□□□□ 0.64
MSH5-203ENST00000375750 AKAP12Q02952 1782 aa19.05■□□□□ 0.64
MSH5-203ENST00000375750 NGDNQ8NEJ9 315 aaKnown RBP19.05■□□□□ 0.64
MSH5-203ENST00000375750 ITSN1Q15811 1721 aa19.05■□□□□ 0.64
MSH5-203ENST00000375750 USP6P35125 1406 aa19.04■□□□□ 0.64
MSH5-203ENST00000375750 TOPAZ1Q8N9V7 1692 aa19.04■□□□□ 0.64
MSH5-203ENST00000375750 ELL2O00472 640 aaPredicted RBP19.04■□□□□ 0.64
MSH5-203ENST00000375750 CD2BP2O95400 341 aaKnown RBP19.04■□□□□ 0.64
MSH5-203ENST00000375750 RBM42Q9BTD8 480 aaKnown RBP19.03■□□□□ 0.64
MSH5-203ENST00000375750 NPHP4O75161 1426 aaPredicted RBP19.03■□□□□ 0.64
MSH5-203ENST00000375750 MAP2P11137 1827 aaKnown RBP19.03■□□□□ 0.64
MSH5-203ENST00000375750 NUCB1Q02818 461 aa19.02■□□□□ 0.64
MSH5-203ENST00000375750 RGPD8O14715 1765 aaPredicted RBP19.02■□□□□ 0.64
MSH5-203ENST00000375750 SOX12O15370 315 aa19.02■□□□□ 0.63
MSH5-203ENST00000375750 ANKRD45Q5TZF3 282 aa19.01■□□□□ 0.63
MSH5-203ENST00000375750 CHD1LQ86WJ1 897 aa19■□□□□ 0.63
MSH5-203ENST00000375750 CHD2O14647 1828 aaKnown RBP19■□□□□ 0.63
MSH5-203ENST00000375750 TNPO1Q92973 898 aaKnown RBP19■□□□□ 0.63
MSH5-203ENST00000375750 AATKQ6ZMQ8 1374 aa19■□□□□ 0.63
MSH5-203ENST00000375750 HMOX1P09601 288 aa18.99■□□□□ 0.63
MSH5-203ENST00000375750 CT47B1P0C2W7 299 aaPredicted RBP18.99■□□□□ 0.63
MSH5-203ENST00000375750 TSPYL6Q8N831 410 aa18.99■□□□□ 0.63
MSH5-203ENST00000375750 GAS2L3Q86XJ1 694 aa18.98■□□□□ 0.63
MSH5-203ENST00000375750 HSP90AB1P08238 724 aaKnown RBP18.98■□□□□ 0.63
MSH5-203ENST00000375750 IL13P35225 146 aa18.98■□□□□ 0.63
MSH5-203ENST00000375750 SSH2Q76I76 1423 aa18.98■□□□□ 0.63
MSH5-203ENST00000375750 KIF2CQ99661 725 aa18.98■□□□□ 0.63
MSH5-203ENST00000375750 DDIT3P35638 169 aa18.98■□□□□ 0.63
MSH5-203ENST00000375750 PRKAR2BP31323 418 aa18.97■□□□□ 0.63
MSH5-203ENST00000375750 PHACTR3Q96KR7 559 aa18.97■□□□□ 0.63
MSH5-203ENST00000375750 NRKQ7Z2Y5 1582 aa18.97■□□□□ 0.63
MSH5-203ENST00000375750 NAP1L5Q96NT1 182 aaPredicted RBP18.97■□□□□ 0.63
MSH5-203ENST00000375750 RBM25P49756 843 aaKnown RBP18.96■□□□□ 0.63
MSH5-203ENST00000375750 C14orf37Q86TY3 774 aa18.96■□□□□ 0.63
MSH5-203ENST00000375750 GRPEL1Q9HAV7 217 aa18.96■□□□□ 0.63
MSH5-203ENST00000375750 FCHSD2O94868 740 aa18.96■□□□□ 0.63
MSH5-203ENST00000375750 NUTM2GQ5VZR2 741 aa18.95■□□□□ 0.62
MSH5-203ENST00000375750 OVOS2A0A0J9YW53 1432 aa18.95■□□□□ 0.62
MSH5-203ENST00000375750 OVOS2Q6IE36 1432 aa18.95■□□□□ 0.62
MSH5-203ENST00000375750 IPO8O15397 1037 aaKnown RBP18.95■□□□□ 0.62
MSH5-203ENST00000375750 ERBB4Q15303 1308 aa18.94■□□□□ 0.62
MSH5-203ENST00000375750 KIF16BQ96L93 1317 aa18.94■□□□□ 0.62
MSH5-203ENST00000375750 ANKARQ7Z5J8 1434 aa18.94■□□□□ 0.62
MSH5-203ENST00000375750 NCBP3Q53F19 620 aaKnown RBP18.94■□□□□ 0.62
MSH5-203ENST00000375750 SIRT2Q8IXJ6 389 aa18.94■□□□□ 0.62
MSH5-203ENST00000375750 TTC21AQ8NDW8 1320 aa18.94■□□□□ 0.62
MSH5-203ENST00000375750 ZBTB7BO15156 539 aaPredicted RBP18.93■□□□□ 0.62
MSH5-203ENST00000375750 CDK12Q9NYV4 1490 aaPredicted RBP18.93■□□□□ 0.62
MSH5-203ENST00000375750 MRE11P49959 708 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms