RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 SH3BP2P78314 561 aa3.85□□□□□ -1.79
CCDC7-204ENST00000375025 GPIHBP1Q8IV16 184 aa3.85□□□□□ -1.79
CCDC7-204ENST00000375025 RAD54L2Q9Y4B4 1467 aa3.85□□□□□ -1.79
CCDC7-204ENST00000375025 KDM5BQ9UGL1 1544 aa3.85□□□□□ -1.79
CCDC7-204ENST00000375025 TDRD9Q8NDG6 1382 aaKnown RBP3.85□□□□□ -1.79
CCDC7-204ENST00000375025 MADDQ8WXG6 1647 aa3.85□□□□□ -1.79
CCDC7-204ENST00000375025 IRF6O14896 467 aa3.85□□□□□ -1.79
CCDC7-204ENST00000375025 ALDH1A1P00352 501 aa3.85□□□□□ -1.79
CCDC7-204ENST00000375025 HLA-CQ95604 372 aa3.85□□□□□ -1.79
CCDC7-204ENST00000375025 PTPRNQ16849 979 aa3.84□□□□□ -1.79
CCDC7-204ENST00000375025 NUDT12Q9BQG2 462 aa3.84□□□□□ -1.79
CCDC7-204ENST00000375025 FAM217BQ9NTX9 383 aaPredicted RBP3.84□□□□□ -1.79
CCDC7-204ENST00000375025 MINK1Q8N4C8 1332 aaPredicted RBP3.84□□□□□ -1.79
CCDC7-204ENST00000375025 ASXL2Q76L83 1435 aa3.84□□□□□ -1.79
CCDC7-204ENST00000375025 FGD5Q6ZNL6 1462 aa3.84□□□□□ -1.8
CCDC7-204ENST00000375025 DESI1Q6ICB0 168 aa3.84□□□□□ -1.8
CCDC7-204ENST00000375025 EVA1BQ9NVM1 165 aa3.83□□□□□ -1.8
CCDC7-204ENST00000375025 CCNYL3P0C7X3 344 aa3.83□□□□□ -1.8
CCDC7-204ENST00000375025 BMP1P13497 986 aa3.83□□□□□ -1.8
CCDC7-204ENST00000375025 VARSP26640 1264 aaKnown RBP3.83□□□□□ -1.8
CCDC7-204ENST00000375025 CDK15Q96Q40 435 aa3.83□□□□□ -1.8
CCDC7-204ENST00000375025 CCDC24Q8N4L8 307 aa3.82□□□□□ -1.8
CCDC7-204ENST00000375025 EHBP1Q8NDI1 1231 aa3.82□□□□□ -1.8
CCDC7-204ENST00000375025 ZFP42Q96MM3 310 aa3.82□□□□□ -1.8
CCDC7-204ENST00000375025 FER1L4A9Z1Z3 1794 aa3.82□□□□□ -1.8
CCDC7-204ENST00000375025 TIMP2P16035 220 aa3.82□□□□□ -1.8
CCDC7-204ENST00000375025 GJA5P36382 358 aa3.82□□□□□ -1.8
CCDC7-204ENST00000375025 SUZ12Q15022 739 aaKnown RBP3.82□□□□□ -1.8
CCDC7-204ENST00000375025 MRPL14Q6P1L8 145 aaKnown RBP3.82□□□□□ -1.8
CCDC7-204ENST00000375025 PCDHGC3Q9UN70 934 aa3.82□□□□□ -1.8
CCDC7-204ENST00000375025 WASF2Q9Y6W5 498 aa3.82□□□□□ -1.8
CCDC7-204ENST00000375025 ARHGEF40Q8TER5 1519 aa3.81□□□□□ -1.8
CCDC7-204ENST00000375025 KCNH2Q12809 1159 aa3.81□□□□□ -1.8
CCDC7-204ENST00000375025 GPCPD1Q9NPB8 672 aa3.81□□□□□ -1.8
CCDC7-204ENST00000375025 PLEKHG3A1L390 1219 aa3.81□□□□□ -1.8
CCDC7-204ENST00000375025 CLCN1P35523 988 aa3.81□□□□□ -1.8
CCDC7-204ENST00000375025 GUCA2AQ02747 115 aa3.81□□□□□ -1.8
CCDC7-204ENST00000375025 UNC93B1Q9H1C4 597 aa3.81□□□□□ -1.8
CCDC7-204ENST00000375025 MS4A1P11836 297 aa3.8□□□□□ -1.8
CCDC7-204ENST00000375025 MDM2Q00987 491 aaPredicted RBP3.8□□□□□ -1.8
CCDC7-204ENST00000375025 KDM2AQ9Y2K7 1162 aa3.8□□□□□ -1.8
CCDC7-204ENST00000375025 NNTQ13423 1086 aa3.8□□□□□ -1.8
CCDC7-204ENST00000375025 NPM2Q86SE8 214 aaKnown RBP3.8□□□□□ -1.8
CCDC7-204ENST00000375025 ZNF511Q8NB15 262 aa3.8□□□□□ -1.8
CCDC7-204ENST00000375025 RIMS1Q86UR5 1692 aaKnown RBP3.8□□□□□ -1.8
CCDC7-204ENST00000375025 ADH1CP00326 375 aa3.79□□□□□ -1.8
CCDC7-204ENST00000375025 FDX1P10109 184 aa3.79□□□□□ -1.8
CCDC7-204ENST00000375025 SYMPKQ92797 1274 aaKnown RBP3.79□□□□□ -1.8
CCDC7-204ENST00000375025 CUX1P39880 1505 aa3.79□□□□□ -1.8
CCDC7-204ENST00000375025 ZMYM4Q5VZL5 1548 aa3.79□□□□□ -1.8
CCDC7-204ENST00000375025 ARHGEF12Q9NZN5 1544 aa3.79□□□□□ -1.8
CCDC7-204ENST00000375025 SPDYE5A6NIY4 337 aa3.79□□□□□ -1.8
CCDC7-204ENST00000375025 CCDC102AQ96A19 550 aa3.79□□□□□ -1.8
CCDC7-204ENST00000375025 TLL2Q9Y6L7 1015 aa3.79□□□□□ -1.8
CCDC7-204ENST00000375025 NEO1Q92859 1461 aa3.79□□□□□ -1.8
CCDC7-204ENST00000375025 VEGFBP49765 207 aa3.79□□□□□ -1.8
CCDC7-204ENST00000375025 CCDC88BA6NC98 1476 aa3.78□□□□□ -1.8
CCDC7-204ENST00000375025 SCARF1Q14162 830 aa3.78□□□□□ -1.8
CCDC7-204ENST00000375025 SPIRE2Q8WWL2 714 aa3.78□□□□□ -1.8
CCDC7-204ENST00000375025 BAP1Q92560 729 aa3.78□□□□□ -1.8
CCDC7-204ENST00000375025 POGZQ7Z3K3 1410 aa3.78□□□□□ -1.8
CCDC7-204ENST00000375025 CPS1P31327 1500 aa3.78□□□□□ -1.8
CCDC7-204ENST00000375025 MAGI2Q86UL8 1455 aa3.78□□□□□ -1.8
CCDC7-204ENST00000375025 CDK12Q9NYV4 1490 aaPredicted RBP3.78□□□□□ -1.8
CCDC7-204ENST00000375025 FRMPD1Q5SYB0 1578 aa3.78□□□□□ -1.8
CCDC7-204ENST00000375025 NCOA1Q15788 1441 aa3.78□□□□□ -1.8
CCDC7-204ENST00000375025 F12P00748 615 aaPredicted RBP3.78□□□□□ -1.8
CCDC7-204ENST00000375025 LYPD8Q6UX82 237 aa3.78□□□□□ -1.8
CCDC7-204ENST00000375025 C1QTNF2Q9BXJ5 285 aa3.78□□□□□ -1.8
CCDC7-204ENST00000375025 CUL7Q14999 1698 aa3.78□□□□□ -1.81
CCDC7-204ENST00000375025 WDR7Q9Y4E6 1490 aa3.77□□□□□ -1.81
CCDC7-204ENST00000375025 PPFIA3O75145 1194 aa3.77□□□□□ -1.81
CCDC7-204ENST00000375025 NR5A1Q13285 461 aa3.77□□□□□ -1.81
CCDC7-204ENST00000375025 NUTM1Q86Y26 1132 aa3.77□□□□□ -1.81
CCDC7-204ENST00000375025 FAM174AQ8TBP5 190 aa3.77□□□□□ -1.81
CCDC7-204ENST00000375025 NANOS1Q8WY41 292 aaKnown RBP3.77□□□□□ -1.81
CCDC7-204ENST00000375025 LRP5O75197 1615 aa3.77□□□□□ -1.81
CCDC7-204ENST00000375025 PLA2R1Q13018 1463 aa3.77□□□□□ -1.81
CCDC7-204ENST00000375025 FANCAO15360 1455 aa3.77□□□□□ -1.81
CCDC7-204ENST00000375025 SOS2Q07890 1332 aaPredicted RBP3.76□□□□□ -1.81
CCDC7-204ENST00000375025 WDR4P57081 412 aaKnown RBP3.76□□□□□ -1.81
CCDC7-204ENST00000375025 KRT76Q01546 638 aa3.76□□□□□ -1.81
CCDC7-204ENST00000375025 MEIOBQ8N635 442 aa3.76□□□□□ -1.81
CCDC7-204ENST00000375025 PURBQ96QR8 312 aaKnown RBP3.76□□□□□ -1.81
CCDC7-204ENST00000375025 MAP4K5Q9Y4K4 846 aa3.76□□□□□ -1.81
CCDC7-204ENST00000375025 TNIKQ9UKE5 1360 aa3.76□□□□□ -1.81
CCDC7-204ENST00000375025 PRR7Q8TB68 274 aa3.76□□□□□ -1.81
CCDC7-204ENST00000375025 ZCCHC11Q5TAX3 1644 aaKnown RBP3.76□□□□□ -1.81
CCDC7-204ENST00000375025 UACAQ9BZF9 1416 aa3.76□□□□□ -1.81
CCDC7-204ENST00000375025 GRM5P41594 1212 aa3.75□□□□□ -1.81
CCDC7-204ENST00000375025 TRMT44Q8IYL2 757 aaKnown RBP3.75□□□□□ -1.81
CCDC7-204ENST00000375025 FHOD3Q2V2M9 1422 aa3.75□□□□□ -1.81
CCDC7-204ENST00000375025 REREQ9P2R6 1566 aa3.75□□□□□ -1.81
CCDC7-204ENST00000375025 SETD1BQ9UPS6 1966 aaKnown RBP3.75□□□□□ -1.81
CCDC7-204ENST00000375025 MTMR2Q13614 643 aa3.75□□□□□ -1.81
CCDC7-204ENST00000375025 AMHR2Q16671 573 aa3.75□□□□□ -1.81
CCDC7-204ENST00000375025 TUSC1Q2TAM9 212 aa3.75□□□□□ -1.81
CCDC7-204ENST00000375025 LINC01559Q495D7 138 aa3.75□□□□□ -1.81
CCDC7-204ENST00000375025 ALKQ9UM73 1620 aa3.74□□□□□ -1.81
CCDC7-204ENST00000375025 C6orf229H3BNL8 230 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms