RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 MRPL50Q8N5N7 158 aaKnown RBP21.51■■□□□ 1.03
RXRB-201ENST00000374680 GNAI1P63096 354 aa21.51■■□□□ 1.03
RXRB-201ENST00000374680 HDAC1Q13547 482 aaPredicted RBP21.51■■□□□ 1.03
RXRB-201ENST00000374680 LRRC7Q96NW7 1537 aa21.51■■□□□ 1.03
RXRB-201ENST00000374680 ADGRB2O60241 1585 aa21.5■■□□□ 1.03
RXRB-201ENST00000374680 ACEP12821 1306 aa21.49■■□□□ 1.03
RXRB-201ENST00000374680 SMC5Q8IY18 1101 aa21.49■■□□□ 1.03
RXRB-201ENST00000374680 ZBTB7BO15156 539 aaPredicted RBP21.48■■□□□ 1.03
RXRB-201ENST00000374680 EIF4A2Q14240 407 aaKnown RBP21.48■■□□□ 1.03
RXRB-201ENST00000374680 ALDH1L2Q3SY69 923 aa21.48■■□□□ 1.03
RXRB-201ENST00000374680 NCBP3Q53F19 620 aaKnown RBP21.48■■□□□ 1.03
RXRB-201ENST00000374680 FOXO3O43524 673 aa21.47■■□□□ 1.03
RXRB-201ENST00000374680 HDGFP51858 240 aaKnown RBP21.47■■□□□ 1.03
RXRB-201ENST00000374680 RBM33Q96EV2 1170 aaKnown RBP21.47■■□□□ 1.03
RXRB-201ENST00000374680 ROBO2Q9HCK4 1378 aa21.47■■□□□ 1.03
RXRB-201ENST00000374680 FAM135BQ49AJ0 1406 aa21.47■■□□□ 1.03
RXRB-201ENST00000374680 CPS1P31327 1500 aa21.47■■□□□ 1.03
RXRB-201ENST00000374680 CHD1LQ86WJ1 897 aa21.47■■□□□ 1.03
RXRB-201ENST00000374680 PPP6R1Q9UPN7 881 aa21.46■■□□□ 1.03
RXRB-201ENST00000374680 MAP2P11137 1827 aaKnown RBP21.46■■□□□ 1.03
RXRB-201ENST00000374680 FOXD4L1Q9NU39 408 aa21.46■■□□□ 1.03
RXRB-201ENST00000374680 RIMBP3CA6NJZ7 1639 aa21.46■■□□□ 1.03
RXRB-201ENST00000374680 RIMBP3BA6NNM3 1639 aa21.46■■□□□ 1.03
RXRB-201ENST00000374680 RIMBP3Q9UFD9 1639 aa21.46■■□□□ 1.03
RXRB-201ENST00000374680 IFT57Q9NWB7 429 aa21.45■■□□□ 1.02
RXRB-201ENST00000374680 DIP2BQ9P265 1576 aa21.45■■□□□ 1.02
RXRB-201ENST00000374680 SIRT2Q8IXJ6 389 aa21.44■■□□□ 1.02
RXRB-201ENST00000374680 CFAP44Q96MT7 982 aa21.44■■□□□ 1.02
RXRB-201ENST00000374680 EDC4Q6P2E9 1401 aaKnown RBP21.44■■□□□ 1.02
RXRB-201ENST00000374680 TTC21BQ7Z4L5 1316 aa21.44■■□□□ 1.02
RXRB-201ENST00000374680 NUCB1Q02818 461 aa21.44■■□□□ 1.02
RXRB-201ENST00000374680 NECTIN2Q92692 538 aa21.44■■□□□ 1.02
RXRB-201ENST00000374680 TNRQ92752 1358 aa21.43■■□□□ 1.02
RXRB-201ENST00000374680 CALD1Q05682 793 aaKnown RBP21.43■■□□□ 1.02
RXRB-201ENST00000374680 LTV1Q96GA3 475 aaPredicted RBP21.43■■□□□ 1.02
RXRB-201ENST00000374680 GZF1Q9H116 711 aaPredicted RBP21.43■■□□□ 1.02
RXRB-201ENST00000374680 MED14O60244 1454 aa21.43■■□□□ 1.02
RXRB-201ENST00000374680 C14orf37Q86TY3 774 aa21.42■■□□□ 1.02
RXRB-201ENST00000374680 NGDNQ8NEJ9 315 aaKnown RBP21.42■■□□□ 1.02
RXRB-201ENST00000374680 CPSF1Q10570 1443 aaKnown RBP21.42■■□□□ 1.02
RXRB-201ENST00000374680 C16orf71Q8IYS4 520 aaPredicted RBP21.41■■□□□ 1.02
RXRB-201ENST00000374680 ZNF692Q9BU19 519 aaPredicted RBP21.41■■□□□ 1.02
RXRB-201ENST00000374680 ZNF853P0CG23 659 aa21.4■■□□□ 1.02
RXRB-201ENST00000374680 ATP7BP35670 1465 aa21.4■■□□□ 1.02
RXRB-201ENST00000374680 SLC4A10Q6U841 1118 aa21.4■■□□□ 1.02
RXRB-201ENST00000374680 AMOTL2Q9Y2J4 779 aa21.4■■□□□ 1.02
RXRB-201ENST00000374680 ZBTB7CA1YPR0 619 aa21.39■■□□□ 1.02
RXRB-201ENST00000374680 LMOD3Q0VAK6 560 aa21.38■■□□□ 1.01
RXRB-201ENST00000374680 TMEM2Q9UHN6 1383 aa21.37■■□□□ 1.01
RXRB-201ENST00000374680 RBM42Q9BTD8 480 aaKnown RBP21.37■■□□□ 1.01
RXRB-201ENST00000374680 F6X3S4 739 aa21.36■■□□□ 1.01
RXRB-201ENST00000374680 SMARCA5O60264 1052 aaPredicted RBP21.36■■□□□ 1.01
RXRB-201ENST00000374680 ANTXR1Q9H6X2 564 aa21.36■■□□□ 1.01
RXRB-201ENST00000374680 AMPHP49418 695 aa21.36■■□□□ 1.01
RXRB-201ENST00000374680 KIF20BQ96Q89 1820 aa21.35■■□□□ 1.01
RXRB-201ENST00000374680 SLC4A2P04920 1241 aa21.35■■□□□ 1.01
RXRB-201ENST00000374680 EID1Q9Y6B2 187 aa21.35■■□□□ 1.01
RXRB-201ENST00000374680 OTUD7AQ8TE49 926 aaPredicted RBP21.35■■□□□ 1.01
RXRB-201ENST00000374680 SPATA31D1Q6ZQQ2 1576 aa21.34■■□□□ 1.01
RXRB-201ENST00000374680 HSCBQ8IWL3 235 aa21.33■■□□□ 1.01
RXRB-201ENST00000374680 API5Q9BZZ5 524 aaKnown RBP21.33■■□□□ 1.01
RXRB-201ENST00000374680 NLRP6P59044 892 aa21.33■■□□□ 1
RXRB-201ENST00000374680 MAP3K19Q56UN5 1328 aa21.32■■□□□ 1
RXRB-201ENST00000374680 MTHFSDQ2M296 383 aaKnown RBP21.32■■□□□ 1
RXRB-201ENST00000374680 G2E3Q7L622 706 aa21.32■■□□□ 1
RXRB-201ENST00000374680 RTF1Q92541 710 aaKnown RBP21.31■■□□□ 1
RXRB-201ENST00000374680 ZNF428Q96B54 188 aa21.31■■□□□ 1
RXRB-201ENST00000374680 MEIS3Q99687 375 aa21.31■■□□□ 1
RXRB-201ENST00000374680 ANKRD26Q9UPS8 1709 aa21.31■■□□□ 1
RXRB-201ENST00000374680 AGLP35573 1532 aa21.31■■□□□ 1
RXRB-201ENST00000374680 TBC1D9Q6ZT07 1266 aa21.31■■□□□ 1
RXRB-201ENST00000374680 ARHGAP45Q92619 1136 aa21.31■■□□□ 1
RXRB-201ENST00000374680 TSPYL4Q9UJ04 414 aa21.31■■□□□ 1
RXRB-201ENST00000374680 HSP90AA1P07900 732 aaKnown RBP21.3■■□□□ 1
RXRB-201ENST00000374680 DLC1Q96QB1 1528 aa21.3■■□□□ 1
RXRB-201ENST00000374680 AATKQ6ZMQ8 1374 aa21.3■■□□□ 1
RXRB-201ENST00000374680 ABCC4O15439 1325 aa21.3■■□□□ 1
RXRB-201ENST00000374680 USHBP1Q8N6Y0 703 aa21.3■■□□□ 1
RXRB-201ENST00000374680 GCC1Q96CN9 775 aa21.3■■□□□ 1
RXRB-201ENST00000374680 CDK12Q9NYV4 1490 aaPredicted RBP21.29■■□□□ 1
RXRB-201ENST00000374680 CD2BP2O95400 341 aaKnown RBP21.28■■□□□ 1
RXRB-201ENST00000374680 NRXN3Q9Y4C0 1643 aa21.28■■□□□ 1
RXRB-201ENST00000374680 HSP90AB1P08238 724 aaKnown RBP21.28■■□□□ 1
RXRB-201ENST00000374680 CHL1O00533 1208 aa21.27■■□□□ 1
RXRB-201ENST00000374680 EYA1Q99502 592 aa21.27■■□□□ 1
RXRB-201ENST00000374680 ADAMTS13Q76LX8 1427 aa21.27■■□□□ 1
RXRB-201ENST00000374680 BRPF1P55201 1214 aaPredicted RBP21.27■■□□□ 1
RXRB-201ENST00000374680 BMP2KLQ5H9B9 411 aa21.26■□□□□ 0.99
RXRB-201ENST00000374680 PLEKHG3A1L390 1219 aa21.25■□□□□ 0.99
RXRB-201ENST00000374680 TSHZ3Q63HK5 1081 aa21.25■□□□□ 0.99
RXRB-201ENST00000374680 GSPT1P15170 499 aaKnown RBP21.25■□□□□ 0.99
RXRB-201ENST00000374680 CHMP4BQ9H444 224 aaKnown RBP21.25■□□□□ 0.99
RXRB-201ENST00000374680 PTPRUQ92729 1446 aa21.24■□□□□ 0.99
RXRB-201ENST00000374680 SIRT1Q96EB6 747 aa21.24■□□□□ 0.99
RXRB-201ENST00000374680 KCNA6P17658 529 aa21.23■□□□□ 0.99
RXRB-201ENST00000374680 PLEKHM2Q8IWE5 1019 aa21.23■□□□□ 0.99
RXRB-201ENST00000374680 VIRMAQ69YN4 1812 aaKnown RBP21.23■□□□□ 0.99
RXRB-201ENST00000374680 SETD1AO15047 1707 aaKnown RBP21.23■□□□□ 0.99
RXRB-201ENST00000374680 CDC42BPGQ6DT37 1551 aa21.23■□□□□ 0.99
RXRB-201ENST00000374680 TRHP20396 242 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms