RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 CFAP44Q96MT7 982 aa14.27□□□□□ -0.12
PTPN20-204ENST00000374346 RIMS2Q9UQ26 1411 aa14.27□□□□□ -0.12
PTPN20-204ENST00000374346 A2ML1A8K2U0 1454 aa14.27□□□□□ -0.12
PTPN20-204ENST00000374346 CPSF1Q10570 1443 aaKnown RBP14.27□□□□□ -0.13
PTPN20-204ENST00000374346 AGLP35573 1532 aa14.26□□□□□ -0.13
PTPN20-204ENST00000374346 WASLO00401 505 aaPredicted RBP14.26□□□□□ -0.13
PTPN20-204ENST00000374346 COG3Q96JB2 828 aa14.26□□□□□ -0.13
PTPN20-204ENST00000374346 PHACTR3Q96KR7 559 aa14.26□□□□□ -0.13
PTPN20-204ENST00000374346 API5Q9BZZ5 524 aaKnown RBP14.26□□□□□ -0.13
PTPN20-204ENST00000374346 SETD1AO15047 1707 aaKnown RBP14.26□□□□□ -0.13
PTPN20-204ENST00000374346 GOLGA6L3A6NEY3 463 aa14.26□□□□□ -0.13
PTPN20-204ENST00000374346 IL13P35225 146 aa14.26□□□□□ -0.13
PTPN20-204ENST00000374346 TWISTNBQ3B726 338 aaPredicted RBP14.26□□□□□ -0.13
PTPN20-204ENST00000374346 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.26□□□□□ -0.13
PTPN20-204ENST00000374346 SPATA31D1Q6ZQQ2 1576 aa14.26□□□□□ -0.13
PTPN20-204ENST00000374346 RIMBP3CA6NJZ7 1639 aa14.26□□□□□ -0.13
PTPN20-204ENST00000374346 RIMBP3BA6NNM3 1639 aa14.26□□□□□ -0.13
PTPN20-204ENST00000374346 RIMBP3Q9UFD9 1639 aa14.26□□□□□ -0.13
PTPN20-204ENST00000374346 ZNF853P0CG23 659 aa14.25□□□□□ -0.13
PTPN20-204ENST00000374346 MBIPQ9NS73 344 aa14.25□□□□□ -0.13
PTPN20-204ENST00000374346 ABCC4O15439 1325 aa14.25□□□□□ -0.13
PTPN20-204ENST00000374346 HDGFP51858 240 aaKnown RBP14.24□□□□□ -0.13
PTPN20-204ENST00000374346 CIZ1Q9ULV3 898 aaPredicted RBP14.24□□□□□ -0.13
PTPN20-204ENST00000374346 EMILIN1Q9Y6C2 1016 aa14.24□□□□□ -0.13
PTPN20-204ENST00000374346 DLG5Q8TDM6 1919 aa14.24□□□□□ -0.13
PTPN20-204ENST00000374346 HSP90AB1P08238 724 aaKnown RBP14.24□□□□□ -0.13
PTPN20-204ENST00000374346 KIF24Q5T7B8 1368 aa14.24□□□□□ -0.13
PTPN20-204ENST00000374346 PTMSP20962 102 aa14.23□□□□□ -0.13
PTPN20-204ENST00000374346 FBLN1P23142 703 aa14.23□□□□□ -0.13
PTPN20-204ENST00000374346 NCOA3Q9Y6Q9 1424 aa14.23□□□□□ -0.13
PTPN20-204ENST00000374346 TRAK2O60296 914 aa14.23□□□□□ -0.13
PTPN20-204ENST00000374346 HSP90AA1P07900 732 aaKnown RBP14.23□□□□□ -0.13
PTPN20-204ENST00000374346 THUMPD2Q9BTF0 503 aaKnown RBP14.23□□□□□ -0.13
PTPN20-204ENST00000374346 ZNF692Q9BU19 519 aaPredicted RBP14.23□□□□□ -0.13
PTPN20-204ENST00000374346 CCDC61Q9Y6R9 512 aa14.23□□□□□ -0.13
PTPN20-204ENST00000374346 NME9Q86XW9 330 aa14.22□□□□□ -0.13
PTPN20-204ENST00000374346 TSPYL6Q8N831 410 aa14.22□□□□□ -0.13
PTPN20-204ENST00000374346 MON2Q7Z3U7 1717 aa14.22□□□□□ -0.13
PTPN20-204ENST00000374346 ELL2O00472 640 aaPredicted RBP14.22□□□□□ -0.13
PTPN20-204ENST00000374346 GBP4Q96PP9 640 aa14.22□□□□□ -0.13
PTPN20-204ENST00000374346 ITSN1Q15811 1721 aa14.21□□□□□ -0.13
PTPN20-204ENST00000374346 NUDT16Q96DE0 195 aaKnown RBP14.21□□□□□ -0.13
PTPN20-204ENST00000374346 SIRT1Q96EB6 747 aa14.21□□□□□ -0.13
PTPN20-204ENST00000374346 ISY1Q9ULR0 285 aaKnown RBP14.21□□□□□ -0.13
PTPN20-204ENST00000374346 C1orf115Q9H7X2 142 aa14.21□□□□□ -0.13
PTPN20-204ENST00000374346 FAM69CQ0P6D2 419 aa14.2□□□□□ -0.14
PTPN20-204ENST00000374346 KNDC1Q76NI1 1749 aa14.2□□□□□ -0.14
PTPN20-204ENST00000374346 CDC45O75419 566 aa14.2□□□□□ -0.14
PTPN20-204ENST00000374346 AKAP12Q02952 1782 aa14.19□□□□□ -0.14
PTPN20-204ENST00000374346 FSD2A1L4K1 749 aa14.19□□□□□ -0.14
PTPN20-204ENST00000374346 TBC1D9Q6ZT07 1266 aa14.19□□□□□ -0.14
PTPN20-204ENST00000374346 ESF1Q9H501 851 aaKnown RBP14.19□□□□□ -0.14
PTPN20-204ENST00000374346 ANO8Q9HCE9 1232 aaPredicted RBP14.19□□□□□ -0.14
PTPN20-204ENST00000374346 GZF1Q9H116 711 aaPredicted RBP14.19□□□□□ -0.14
PTPN20-204ENST00000374346 DDIT3P35638 169 aa14.18□□□□□ -0.14
PTPN20-204ENST00000374346 MRE11P49959 708 aa14.18□□□□□ -0.14
PTPN20-204ENST00000374346 SKOR2Q2VWA4 1001 aaPredicted RBP14.18□□□□□ -0.14
PTPN20-204ENST00000374346 C8orf58Q8NAV2 365 aa14.18□□□□□ -0.14
PTPN20-204ENST00000374346 NRXN3Q9Y4C0 1643 aa14.18□□□□□ -0.14
PTPN20-204ENST00000374346 RRS1Q15050 365 aaKnown RBP14.18□□□□□ -0.14
PTPN20-204ENST00000374346 TXNDC2Q86VQ3 553 aa14.18□□□□□ -0.14
PTPN20-204ENST00000374346 C3P01024 1663 aa14.18□□□□□ -0.14
PTPN20-204ENST00000374346 TSPOAP1O95153 1857 aa14.17□□□□□ -0.14
PTPN20-204ENST00000374346 K7ELQ4 463 aaPredicted RBP14.17□□□□□ -0.14
PTPN20-204ENST00000374346 SIRT2Q8IXJ6 389 aa14.17□□□□□ -0.14
PTPN20-204ENST00000374346 TECPR2O15040 1411 aa14.17□□□□□ -0.14
PTPN20-204ENST00000374346 METP08581 1390 aa14.16□□□□□ -0.14
PTPN20-204ENST00000374346 DIP2BQ9P265 1576 aa14.16□□□□□ -0.14
PTPN20-204ENST00000374346 XRCC6P12956 609 aaKnown RBP eCLIP14.16□□□□□ -0.14
PTPN20-204ENST00000374346 CYB5RLQ6IPT4 315 aa14.16□□□□□ -0.14
PTPN20-204ENST00000374346 RAB3GAP1Q15042 981 aa14.16□□□□□ -0.14
PTPN20-204ENST00000374346 INTS3Q68E01 1043 aaKnown RBP14.16□□□□□ -0.14
PTPN20-204ENST00000374346 CASC1Q6TDU7 716 aa14.16□□□□□ -0.14
PTPN20-204ENST00000374346 RPAP2Q8IXW5 612 aaPredicted RBP14.16□□□□□ -0.14
PTPN20-204ENST00000374346 TNPO1Q92973 898 aaKnown RBP14.16□□□□□ -0.14
PTPN20-204ENST00000374346 DCTPP1Q9H773 170 aa14.16□□□□□ -0.14
PTPN20-204ENST00000374346 FAM83GA6ND36 823 aa14.15□□□□□ -0.14
PTPN20-204ENST00000374346 GOLGA6L22H0YM25 854 aa14.15□□□□□ -0.14
PTPN20-204ENST00000374346 ZRANB1Q9UGI0 708 aa14.15□□□□□ -0.14
PTPN20-204ENST00000374346 NRKQ7Z2Y5 1582 aa14.15□□□□□ -0.14
PTPN20-204ENST00000374346 CPS1P31327 1500 aa14.15□□□□□ -0.14
PTPN20-204ENST00000374346 ARXQ96QS3 562 aa14.15□□□□□ -0.14
PTPN20-204ENST00000374346 KIF2CQ99661 725 aa14.15□□□□□ -0.14
PTPN20-204ENST00000374346 PTPRCP08575 1304 aa14.14□□□□□ -0.15
PTPN20-204ENST00000374346 MLECQ14165 292 aa14.14□□□□□ -0.15
PTPN20-204ENST00000374346 KIAA0232Q92628 1395 aa14.13□□□□□ -0.15
PTPN20-204ENST00000374346 RABEP1Q15276 862 aa14.13□□□□□ -0.15
PTPN20-204ENST00000374346 SULT6B1Q6IMI4 303 aa14.13□□□□□ -0.15
PTPN20-204ENST00000374346 DCTN1Q14203 1278 aa14.13□□□□□ -0.15
PTPN20-204ENST00000374346 PLEKHM2Q8IWE5 1019 aa14.13□□□□□ -0.15
PTPN20-204ENST00000374346 ANKRD44Q8N8A2 993 aa14.13□□□□□ -0.15
PTPN20-204ENST00000374346 TTC22Q5TAA0 569 aa14.12□□□□□ -0.15
PTPN20-204ENST00000374346 CHL1O00533 1208 aa14.12□□□□□ -0.15
PTPN20-204ENST00000374346 EIF4A2Q14240 407 aaKnown RBP14.12□□□□□ -0.15
PTPN20-204ENST00000374346 GRPEL1Q9HAV7 217 aa14.12□□□□□ -0.15
PTPN20-204ENST00000374346 HMMRO75330 724 aa14.1□□□□□ -0.15
PTPN20-204ENST00000374346 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.1□□□□□ -0.15
PTPN20-204ENST00000374346 TTC21BQ7Z4L5 1316 aa14.1□□□□□ -0.15
PTPN20-204ENST00000374346 GSPT1P15170 499 aaKnown RBP14.1□□□□□ -0.15
PTPN20-204ENST00000374346 NCKAP5LQ9HCH0 1330 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms