RNA–Protein interactions for RNA: ENST00000374274.7

SNX12-202, Transcript of sorting nexin 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX12, Length 2,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-202ENST00000374274 GAS2L2Q8NHY3 880 aa16.57■□□□□ 0.24
SNX12-202ENST00000374274 GCC1Q96CN9 775 aa16.57■□□□□ 0.24
SNX12-202ENST00000374274 CCDC94Q9BW85 323 aaPredicted RBP16.57■□□□□ 0.24
SNX12-202ENST00000374274 CWC22Q9HCG8 908 aaKnown RBP16.57■□□□□ 0.24
SNX12-202ENST00000374274 CD2BP2O95400 341 aaKnown RBP16.56■□□□□ 0.24
SNX12-202ENST00000374274 RABEP1Q15276 862 aa16.56■□□□□ 0.24
SNX12-202ENST00000374274 LMBRD1Q9NUN5 540 aa16.56■□□□□ 0.24
SNX12-202ENST00000374274 KIF13AQ9H1H9 1805 aa16.56■□□□□ 0.24
SNX12-202ENST00000374274 PREX1Q8TCU6 1659 aa16.56■□□□□ 0.24
SNX12-202ENST00000374274 DMTNQ08495 405 aa16.55■□□□□ 0.24
SNX12-202ENST00000374274 RBSNQ9H1K0 784 aa16.55■□□□□ 0.24
SNX12-202ENST00000374274 XPCQ01831 940 aaPredicted RBP16.55■□□□□ 0.24
SNX12-202ENST00000374274 C14orf93Q9H972 538 aaKnown RBP16.55■□□□□ 0.24
SNX12-202ENST00000374274 NCLP19338 710 aaKnown RBP16.54■□□□□ 0.24
SNX12-202ENST00000374274 AGLP35573 1532 aa16.54■□□□□ 0.24
SNX12-202ENST00000374274 NEXMIFQ5QGS0 1516 aa16.54■□□□□ 0.24
SNX12-202ENST00000374274 CAVIN1Q6NZI2 390 aaKnown RBP16.53■□□□□ 0.24
SNX12-202ENST00000374274 SSH1Q8WYL5 1049 aa16.53■□□□□ 0.24
SNX12-202ENST00000374274 SLC52A1Q9NWF4 448 aa16.53■□□□□ 0.24
SNX12-202ENST00000374274 BRPF1P55201 1214 aaPredicted RBP16.53■□□□□ 0.24
SNX12-202ENST00000374274 ALDH1L2Q3SY69 923 aa16.53■□□□□ 0.24
SNX12-202ENST00000374274 TBC1D9Q6ZT07 1266 aa16.53■□□□□ 0.24
SNX12-202ENST00000374274 LRSAM1Q6UWE0 723 aa16.52■□□□□ 0.24
SNX12-202ENST00000374274 TMEM57Q8N5G2 664 aa16.52■□□□□ 0.24
SNX12-202ENST00000374274 ZNF428Q96B54 188 aa16.52■□□□□ 0.24
SNX12-202ENST00000374274 LNPKQ9C0E8 428 aa16.52■□□□□ 0.24
SNX12-202ENST00000374274 ADGRB1O14514 1584 aa16.52■□□□□ 0.23
SNX12-202ENST00000374274 IDI1Q13907 227 aa16.52■□□□□ 0.23
SNX12-202ENST00000374274 MCTP1Q6DN14 999 aa16.52■□□□□ 0.23
SNX12-202ENST00000374274 VGFO15240 615 aaPredicted RBP16.51■□□□□ 0.23
SNX12-202ENST00000374274 CDC45O75419 566 aa16.51■□□□□ 0.23
SNX12-202ENST00000374274 EXOSC9Q06265 439 aaKnown RBP16.51■□□□□ 0.23
SNX12-202ENST00000374274 PRIMPOLQ96LW4 560 aa16.51■□□□□ 0.23
SNX12-202ENST00000374274 PRIM1P49642 420 aaKnown RBP16.51■□□□□ 0.23
SNX12-202ENST00000374274 MYRIPQ8NFW9 859 aa16.51■□□□□ 0.23
SNX12-202ENST00000374274 NOB1Q9ULX3 412 aaKnown RBP16.51■□□□□ 0.23
SNX12-202ENST00000374274 MTHFSP49914 203 aa16.5■□□□□ 0.23
SNX12-202ENST00000374274 PUS7Q96PZ0 661 aaKnown RBP16.5■□□□□ 0.23
SNX12-202ENST00000374274 GTPBP4Q9BZE4 634 aaKnown RBP16.5■□□□□ 0.23
SNX12-202ENST00000374274 PPP6R1Q9UPN7 881 aa16.5■□□□□ 0.23
SNX12-202ENST00000374274 MYO5BQ9ULV0 1848 aa16.5■□□□□ 0.23
SNX12-202ENST00000374274 GTF2F1P35269 517 aaKnown RBP eCLIP16.5■□□□□ 0.234e-7■■■■□ 22
SNX12-202ENST00000374274 HMGN5P82970 282 aaKnown RBP16.5■□□□□ 0.23
SNX12-202ENST00000374274 PIK3R4Q99570 1358 aa16.49■□□□□ 0.23
SNX12-202ENST00000374274 FOXD4L1Q9NU39 408 aa16.49■□□□□ 0.23
SNX12-202ENST00000374274 MBD3O95983 291 aa16.49■□□□□ 0.23
SNX12-202ENST00000374274 TMEM131LA2VDJ0 1609 aa16.49■□□□□ 0.23
SNX12-202ENST00000374274 KIAA2012Q0VF49 1180 aa16.48■□□□□ 0.23
SNX12-202ENST00000374274 QRICH2Q9H0J4 1663 aa16.48■□□□□ 0.23
SNX12-202ENST00000374274 KIF20AO95235 890 aa16.48■□□□□ 0.23
SNX12-202ENST00000374274 TNNT2P45379 298 aaPredicted RBP16.48■□□□□ 0.23
SNX12-202ENST00000374274 TRAK1Q9UPV9 953 aa16.48■□□□□ 0.23
SNX12-202ENST00000374274 ZFYVE9O95405 1425 aa16.48■□□□□ 0.23
SNX12-202ENST00000374274 ARHGEF40Q8TER5 1519 aa16.47■□□□□ 0.23
SNX12-202ENST00000374274 PPIP5K1Q6PFW1 1433 aa16.47■□□□□ 0.23
SNX12-202ENST00000374274 CLTCQ00610 1675 aaKnown RBP16.47■□□□□ 0.23
SNX12-202ENST00000374274 ZSCAN20P17040 1043 aaPredicted RBP16.46■□□□□ 0.23
SNX12-202ENST00000374274 TSR2Q969E8 191 aaKnown RBP16.46■□□□□ 0.23
SNX12-202ENST00000374274 NUTM2DQ5VT03 806 aaPredicted RBP16.46■□□□□ 0.23
SNX12-202ENST00000374274 TMEM132EQ6IEE7 984 aa16.46■□□□□ 0.23
SNX12-202ENST00000374274 RBM42Q9BTD8 480 aaKnown RBP16.46■□□□□ 0.23
SNX12-202ENST00000374274 U2AF1L5P0DN76 240 aaPredicted RBP16.45■□□□□ 0.22
SNX12-202ENST00000374274 U2AF1Q01081 240 aaKnown RBP eCLIP16.45■□□□□ 0.22
SNX12-202ENST00000374274 GPT2Q8TD30 523 aa16.45■□□□□ 0.22
SNX12-202ENST00000374274 ARHGAP45Q92619 1136 aa16.45■□□□□ 0.22
SNX12-202ENST00000374274 PLEKHF1Q96S99 279 aa16.45■□□□□ 0.22
SNX12-202ENST00000374274 TMPOP42166 694 aaKnown RBP16.45■□□□□ 0.22
SNX12-202ENST00000374274 FBXO31Q5XUX0 539 aaPredicted RBP16.45■□□□□ 0.22
SNX12-202ENST00000374274 ANKRD45Q5TZF3 282 aa16.44■□□□□ 0.22
SNX12-202ENST00000374274 TRIM35Q9UPQ4 493 aa16.44■□□□□ 0.22
SNX12-202ENST00000374274 PTCH1Q13635 1447 aa16.44■□□□□ 0.22
SNX12-202ENST00000374274 ARHGEF28Q8N1W1 1705 aaKnown RBP16.43■□□□□ 0.22
SNX12-202ENST00000374274 ST18O60284 1047 aa16.43■□□□□ 0.22
SNX12-202ENST00000374274 LETM1O95202 739 aaPredicted RBP16.43■□□□□ 0.22
SNX12-202ENST00000374274 COL3A1P02461 1466 aaPredicted RBP16.43■□□□□ 0.22
SNX12-202ENST00000374274 KLHL34Q8N239 644 aa16.43■□□□□ 0.22
SNX12-202ENST00000374274 ANKRD36BQ8N2N9 1353 aa16.43■□□□□ 0.22
SNX12-202ENST00000374274 ZBTB7BO15156 539 aaPredicted RBP16.42■□□□□ 0.22
SNX12-202ENST00000374274 PRPF40AO75400 957 aaKnown RBP16.42■□□□□ 0.22
SNX12-202ENST00000374274 SYAP1Q96A49 352 aaPredicted RBP16.42■□□□□ 0.22
SNX12-202ENST00000374274 TMEM63CQ9P1W3 806 aa16.42■□□□□ 0.22
SNX12-202ENST00000374274 UVSSAQ2YD98 709 aa16.41■□□□□ 0.22
SNX12-202ENST00000374274 FAM184AQ8NB25 1140 aa16.41■□□□□ 0.22
SNX12-202ENST00000374274 PIBF1Q8WXW3 757 aa16.41■□□□□ 0.22
SNX12-202ENST00000374274 USP26Q9BXU7 913 aa16.41■□□□□ 0.22
SNX12-202ENST00000374274 KIF24Q5T7B8 1368 aa16.4■□□□□ 0.22
SNX12-202ENST00000374274 SPATA31D1Q6ZQQ2 1576 aa16.4■□□□□ 0.22
SNX12-202ENST00000374274 PLEKHG5O94827 1062 aa16.4■□□□□ 0.22
SNX12-202ENST00000374274 AK9Q5TCS8 1911 aa16.4■□□□□ 0.22
SNX12-202ENST00000374274 PHF14O94880 888 aa16.4■□□□□ 0.22
SNX12-202ENST00000374274 SYCE3A1L190 88 aa16.39■□□□□ 0.21
SNX12-202ENST00000374274 INTS3Q68E01 1043 aaKnown RBP16.39■□□□□ 0.21
SNX12-202ENST00000374274 SLC12A5Q9H2X9 1139 aa16.39■□□□□ 0.21
SNX12-202ENST00000374274 TSPY26PQ9H489 355 aa16.39■□□□□ 0.21
SNX12-202ENST00000374274 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.39■□□□□ 0.21
SNX12-202ENST00000374274 MLECQ14165 292 aa16.38■□□□□ 0.21
SNX12-202ENST00000374274 PTMAP06454 111 aaKnown RBP16.38■□□□□ 0.21
SNX12-202ENST00000374274 TAF3Q5VWG9 929 aa16.38■□□□□ 0.21
SNX12-202ENST00000374274 RBM27Q9P2N5 1060 aaKnown RBP16.38■□□□□ 0.21
SNX12-202ENST00000374274 STAG3Q9UJ98 1225 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms