RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 RBM10P98175 930 aaKnown RBP20.92■□□□□ 0.94
PTPRU-202ENST00000373779 HDAC1Q13547 482 aaPredicted RBP20.91■□□□□ 0.94
PTPRU-202ENST00000373779 C14orf93Q9H972 538 aaKnown RBP20.91■□□□□ 0.94
PTPRU-202ENST00000373779 PDCP20941 246 aa20.91■□□□□ 0.94
PTPRU-202ENST00000373779 AIMP1Q12904 312 aaKnown RBP20.91■□□□□ 0.94
PTPRU-202ENST00000373779 HDGFL1Q5TGJ6 251 aa20.91■□□□□ 0.94
PTPRU-202ENST00000373779 FOSBP53539 338 aa20.91■□□□□ 0.94
PTPRU-202ENST00000373779 ZNF771Q7L3S4 317 aaPredicted RBP20.91■□□□□ 0.94
PTPRU-202ENST00000373779 SSFA2P28290 1259 aa20.91■□□□□ 0.94
PTPRU-202ENST00000373779 HIP1O00291 1037 aa20.9■□□□□ 0.94
PTPRU-202ENST00000373779 IL16Q14005 1332 aa20.9■□□□□ 0.94
PTPRU-202ENST00000373779 HMGN5P82970 282 aaKnown RBP20.9■□□□□ 0.94
PTPRU-202ENST00000373779 ERC1Q8IUD2 1116 aa20.89■□□□□ 0.93
PTPRU-202ENST00000373779 CREBRFQ8IUR6 639 aa20.89■□□□□ 0.93
PTPRU-202ENST00000373779 POLR3AO14802 1390 aaPredicted RBP20.89■□□□□ 0.93
PTPRU-202ENST00000373779 ADGRL2O95490 1459 aa20.89■□□□□ 0.93
PTPRU-202ENST00000373779 RRP9O43818 475 aaKnown RBP20.89■□□□□ 0.93
PTPRU-202ENST00000373779 AEBP1Q8IUX7 1158 aa20.88■□□□□ 0.93
PTPRU-202ENST00000373779 RASSF8Q8NHQ8 419 aa20.88■□□□□ 0.93
PTPRU-202ENST00000373779 ZMYM4Q5VZL5 1548 aa20.88■□□□□ 0.93
PTPRU-202ENST00000373779 TBC1D9Q6ZT07 1266 aa20.88■□□□□ 0.93
PTPRU-202ENST00000373779 CYP46A1Q9Y6A2 500 aa20.88■□□□□ 0.93
PTPRU-202ENST00000373779 TRIM5Q9C035 493 aa20.88■□□□□ 0.93
PTPRU-202ENST00000373779 TRIM29Q14134 588 aa20.88■□□□□ 0.93
PTPRU-202ENST00000373779 GOLGA6L1Q8N7Z2 621 aa20.88■□□□□ 0.93
PTPRU-202ENST00000373779 SPATA31E1Q6ZUB1 1445 aa20.87■□□□□ 0.93
PTPRU-202ENST00000373779 SMARCA5O60264 1052 aaPredicted RBP20.87■□□□□ 0.93
PTPRU-202ENST00000373779 MAP4K4O95819 1239 aaPredicted RBP20.87■□□□□ 0.93
PTPRU-202ENST00000373779 FBXW7Q969H0 707 aa20.87■□□□□ 0.93
PTPRU-202ENST00000373779 HOMER1Q86YM7 354 aa20.87■□□□□ 0.93
PTPRU-202ENST00000373779 SYNE3Q6ZMZ3 975 aa20.86■□□□□ 0.93
PTPRU-202ENST00000373779 SYCE3A1L190 88 aa20.86■□□□□ 0.93
PTPRU-202ENST00000373779 DCTN1Q14203 1278 aa20.86■□□□□ 0.93
PTPRU-202ENST00000373779 ANKRD36BQ8N2N9 1353 aa20.86■□□□□ 0.93
PTPRU-202ENST00000373779 ABTB2Q8N961 1025 aa20.86■□□□□ 0.93
PTPRU-202ENST00000373779 NUCB1Q02818 461 aa20.86■□□□□ 0.93
PTPRU-202ENST00000373779 EXOC6BQ9Y2D4 811 aa20.86■□□□□ 0.93
PTPRU-202ENST00000373779 KDM2BQ8NHM5 1336 aa20.85■□□□□ 0.93
PTPRU-202ENST00000373779 TNNT3P45378 269 aaPredicted RBP20.85■□□□□ 0.93
PTPRU-202ENST00000373779 NUDT16Q96DE0 195 aaKnown RBP20.85■□□□□ 0.93
PTPRU-202ENST00000373779 UQCRHLA0A096LP55 91 aa20.85■□□□□ 0.93
PTPRU-202ENST00000373779 UQCRHP07919 91 aa20.85■□□□□ 0.93
PTPRU-202ENST00000373779 CCDC192P0DO97 292 aa20.85■□□□□ 0.93
PTPRU-202ENST00000373779 TPD52L1Q16890 204 aaPredicted RBP20.85■□□□□ 0.93
PTPRU-202ENST00000373779 MAGI3Q5TCQ9 1506 aa20.85■□□□□ 0.93
PTPRU-202ENST00000373779 TRDNQ13061 729 aa20.84■□□□□ 0.93
PTPRU-202ENST00000373779 CCAR2Q8N163 923 aaKnown RBP20.84■□□□□ 0.93
PTPRU-202ENST00000373779 NAT10Q9H0A0 1025 aaKnown RBP20.84■□□□□ 0.93
PTPRU-202ENST00000373779 KDM5BQ9UGL1 1544 aa20.84■□□□□ 0.93
PTPRU-202ENST00000373779 MCM10Q7L590 875 aa20.84■□□□□ 0.93
PTPRU-202ENST00000373779 CCDC61Q9Y6R9 512 aa20.84■□□□□ 0.93
PTPRU-202ENST00000373779 NEUROD6Q96NK8 337 aa20.84■□□□□ 0.93
PTPRU-202ENST00000373779 IL1RAPL2Q9NP60 686 aa20.83■□□□□ 0.93
PTPRU-202ENST00000373779 EMILIN1Q9Y6C2 1016 aa20.83■□□□□ 0.93
PTPRU-202ENST00000373779 FANCAO15360 1455 aa20.83■□□□□ 0.93
PTPRU-202ENST00000373779 AKAP17AQ02040 695 aaKnown RBP20.83■□□□□ 0.92
PTPRU-202ENST00000373779 WAPLQ7Z5K2 1190 aa20.83■□□□□ 0.92
PTPRU-202ENST00000373779 SPC24Q8NBT2 197 aa20.83■□□□□ 0.92
PTPRU-202ENST00000373779 RAPGEF4Q8WZA2 1011 aa20.83■□□□□ 0.92
PTPRU-202ENST00000373779 MX1P20591 662 aa20.83■□□□□ 0.92
PTPRU-202ENST00000373779 MPNDQ8N594 471 aa20.82■□□□□ 0.92
PTPRU-202ENST00000373779 INSRP06213 1382 aa20.82■□□□□ 0.92
PTPRU-202ENST00000373779 BLMP54132 1417 aaPredicted RBP20.82■□□□□ 0.92
PTPRU-202ENST00000373779 PLCH2O75038 1416 aa20.82■□□□□ 0.92
PTPRU-202ENST00000373779 APPP05067 770 aa20.82■□□□□ 0.92
PTPRU-202ENST00000373779 SRGAP3O43295 1099 aa20.82■□□□□ 0.92
PTPRU-202ENST00000373779 PLEKHO1Q53GL0 409 aaPredicted RBP20.82■□□□□ 0.92
PTPRU-202ENST00000373779 NME9Q86XW9 330 aa20.81■□□□□ 0.92
PTPRU-202ENST00000373779 TNNQ9UQP3 1299 aa20.81■□□□□ 0.92
PTPRU-202ENST00000373779 A2MP01023 1474 aa20.81■□□□□ 0.92
PTPRU-202ENST00000373779 TPM1P09493 284 aa20.81■□□□□ 0.92
PTPRU-202ENST00000373779 RLBP1P12271 317 aa20.81■□□□□ 0.92
PTPRU-202ENST00000373779 HOOK1Q9UJC3 728 aaKnown RBP20.81■□□□□ 0.92
PTPRU-202ENST00000373779 KRT85P78386 507 aa20.81■□□□□ 0.92
PTPRU-202ENST00000373779 ANKRD1Q15327 319 aa20.81■□□□□ 0.92
PTPRU-202ENST00000373779 SDF4Q9BRK5 362 aa20.81■□□□□ 0.92
PTPRU-202ENST00000373779 MIS18AQ9NYP9 233 aa20.8■□□□□ 0.92
PTPRU-202ENST00000373779 ABCA5Q8WWZ7 1642 aa20.8■□□□□ 0.92
PTPRU-202ENST00000373779 SPINK5Q9NQ38 1064 aaPredicted RBP20.8■□□□□ 0.92
PTPRU-202ENST00000373779 KINO60870 393 aaKnown RBP20.79■□□□□ 0.92
PTPRU-202ENST00000373779 PDRG1Q9NUG6 133 aa20.79■□□□□ 0.92
PTPRU-202ENST00000373779 SEC24BO95487 1268 aa20.79■□□□□ 0.92
PTPRU-202ENST00000373779 CWC27Q6UX04 472 aaKnown RBP20.79■□□□□ 0.92
PTPRU-202ENST00000373779 ZSCAN31Q96LW9 406 aaPredicted RBP20.79■□□□□ 0.92
PTPRU-202ENST00000373779 DNAJC2Q99543 621 aaKnown RBP20.79■□□□□ 0.92
PTPRU-202ENST00000373779 BAG4O95429 457 aaKnown RBP20.79■□□□□ 0.92
PTPRU-202ENST00000373779 RALYLQ86SE5 291 aaKnown RBP20.79■□□□□ 0.92
PTPRU-202ENST00000373779 XRCC6P12956 609 aaKnown RBP eCLIP20.79■□□□□ 0.92
PTPRU-202ENST00000373779 LARP1BQ659C4 914 aaKnown RBP20.78■□□□□ 0.92
PTPRU-202ENST00000373779 DISP1Q96F81 1524 aa20.78■□□□□ 0.92
PTPRU-202ENST00000373779 TNMDQ9H2S6 317 aa20.78■□□□□ 0.92
PTPRU-202ENST00000373779 MBIPQ9NS73 344 aa20.78■□□□□ 0.92
PTPRU-202ENST00000373779 CD109Q6YHK3 1445 aa20.78■□□□□ 0.92
PTPRU-202ENST00000373779 JAKMIP1Q96N16 626 aaKnown RBP20.78■□□□□ 0.92
PTPRU-202ENST00000373779 PES1O00541 588 aaKnown RBP20.78■□□□□ 0.92
PTPRU-202ENST00000373779 NUTM1Q86Y26 1132 aa20.78■□□□□ 0.92
PTPRU-202ENST00000373779 ARHGAP45Q92619 1136 aa20.78■□□□□ 0.92
PTPRU-202ENST00000373779 NFXL1Q6ZNB6 911 aa20.77■□□□□ 0.92
PTPRU-202ENST00000373779 CARD14Q9BXL6 1004 aa20.77■□□□□ 0.92
PTPRU-202ENST00000373779 IDI1Q13907 227 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms