RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 SULT6B1Q6IMI4 303 aa16.91■□□□□ 0.3
LMX1B-202ENST00000373474 GOLGA6L7A0A1B0GV03 622 aa16.91■□□□□ 0.3
LMX1B-202ENST00000373474 KINO60870 393 aaKnown RBP16.91■□□□□ 0.3
LMX1B-202ENST00000373474 MCM4P33991 863 aa16.91■□□□□ 0.3
LMX1B-202ENST00000373474 CYP46A1Q9Y6A2 500 aa16.91■□□□□ 0.3
LMX1B-202ENST00000373474 GPRASP1Q5JY77 1395 aa16.91■□□□□ 0.3
LMX1B-202ENST00000373474 KIAA0586Q9BVV6 1533 aa16.91■□□□□ 0.3
LMX1B-202ENST00000373474 NAP1L1P55209 391 aaKnown RBP16.91■□□□□ 0.3
LMX1B-202ENST00000373474 ABTB2Q8N961 1025 aa16.91■□□□□ 0.3
LMX1B-202ENST00000373474 NLRP2Q9NX02 1062 aa16.91■□□□□ 0.3
LMX1B-202ENST00000373474 RTEL1-TNFRSF6BF6WH68 1400 aa16.91■□□□□ 0.3
LMX1B-202ENST00000373474 KIF14Q15058 1648 aa16.91■□□□□ 0.3
LMX1B-202ENST00000373474 C11orf95C9JLR9 678 aaPredicted RBP16.91■□□□□ 0.3
LMX1B-202ENST00000373474 FIBPO43427 364 aa16.91■□□□□ 0.3
LMX1B-202ENST00000373474 XBP1P17861 261 aa16.91■□□□□ 0.3
LMX1B-202ENST00000373474 TRIM34Q9BYJ4 488 aa16.91■□□□□ 0.3
LMX1B-202ENST00000373474 ANO8Q9HCE9 1232 aaPredicted RBP16.91■□□□□ 0.3
LMX1B-202ENST00000373474 FCHSD2O94868 740 aa16.9■□□□□ 0.3
LMX1B-202ENST00000373474 ANKRD1Q15327 319 aa16.9■□□□□ 0.3
LMX1B-202ENST00000373474 DHX16O60231 1041 aaKnown RBP16.9■□□□□ 0.3
LMX1B-202ENST00000373474 PDILTQ8N807 584 aa16.9■□□□□ 0.3
LMX1B-202ENST00000373474 MSH5O43196 834 aa16.89■□□□□ 0.3
LMX1B-202ENST00000373474 SYTL4Q96C24 671 aaPredicted RBP16.89■□□□□ 0.29
LMX1B-202ENST00000373474 SMC2O95347 1197 aa16.88■□□□□ 0.29
LMX1B-202ENST00000373474 CCDC192P0DO97 292 aa16.88■□□□□ 0.29
LMX1B-202ENST00000373474 PRKCSHP14314 528 aaPredicted RBP16.88■□□□□ 0.29
LMX1B-202ENST00000373474 HDGFL1Q5TGJ6 251 aa16.88■□□□□ 0.29
LMX1B-202ENST00000373474 TXNDC2Q86VQ3 553 aa16.88■□□□□ 0.29
LMX1B-202ENST00000373474 DEF6Q9H4E7 631 aa16.88■□□□□ 0.29
LMX1B-202ENST00000373474 SLC52A1Q9NWF4 448 aa16.88■□□□□ 0.29
LMX1B-202ENST00000373474 TMPOP42166 694 aaKnown RBP16.87■□□□□ 0.29
LMX1B-202ENST00000373474 TMEM57Q8N5G2 664 aa16.87■□□□□ 0.29
LMX1B-202ENST00000373474 MAGI1Q96QZ7 1491 aaPredicted RBP16.87■□□□□ 0.29
LMX1B-202ENST00000373474 ARHGEF11O15085 1522 aa16.87■□□□□ 0.29
LMX1B-202ENST00000373474 ATF3P18847 181 aa16.87■□□□□ 0.29
LMX1B-202ENST00000373474 INCENPQ9NQS7 918 aa16.87■□□□□ 0.29
LMX1B-202ENST00000373474 TBC1D2BQ9UPU7 963 aa16.87■□□□□ 0.29
LMX1B-202ENST00000373474 RAD21O60216 631 aa16.87■□□□□ 0.29
LMX1B-202ENST00000373474 SART3Q15020 963 aaKnown RBP16.86■□□□□ 0.29
LMX1B-202ENST00000373474 NFE2L2Q16236 605 aa16.86■□□□□ 0.29
LMX1B-202ENST00000373474 PLCD4Q9BRC7 762 aa16.86■□□□□ 0.29
LMX1B-202ENST00000373474 EIF3JO75822 258 aaKnown RBP16.86■□□□□ 0.29
LMX1B-202ENST00000373474 AXDND1Q5T1B0 1012 aaPredicted RBP16.86■□□□□ 0.29
LMX1B-202ENST00000373474 RPAP2Q8IXW5 612 aaPredicted RBP16.86■□□□□ 0.29
LMX1B-202ENST00000373474 RBM10P98175 930 aaKnown RBP16.86■□□□□ 0.29
LMX1B-202ENST00000373474 BIVM-ERCC5R4GMW8 1640 aa16.85■□□□□ 0.29
LMX1B-202ENST00000373474 SMARCE1Q969G3 411 aa16.85■□□□□ 0.29
LMX1B-202ENST00000373474 MAP4K4O95819 1239 aaPredicted RBP16.85■□□□□ 0.29
LMX1B-202ENST00000373474 TCEAL9Q9UHQ7 104 aa16.85■□□□□ 0.29
LMX1B-202ENST00000373474 RPRD2Q5VT52 1461 aaKnown RBP16.85■□□□□ 0.29
LMX1B-202ENST00000373474 TNMDQ9H2S6 317 aa16.85■□□□□ 0.29
LMX1B-202ENST00000373474 CT47A1Q5JQC4 288 aaPredicted RBP16.84■□□□□ 0.29
LMX1B-202ENST00000373474 SPC24Q8NBT2 197 aa16.84■□□□□ 0.29
LMX1B-202ENST00000373474 FAM135AQ9P2D6 1515 aa16.84■□□□□ 0.29
LMX1B-202ENST00000373474 ERLIN1O75477 346 aa16.84■□□□□ 0.29
LMX1B-202ENST00000373474 TTC39AQ5SRH9 613 aa16.84■□□□□ 0.29
LMX1B-202ENST00000373474 C20orf194Q5TEA3 1177 aa16.84■□□□□ 0.29
LMX1B-202ENST00000373474 RARSP54136 660 aaKnown RBP16.84■□□□□ 0.29
LMX1B-202ENST00000373474 STK38Q15208 465 aa16.84■□□□□ 0.29
LMX1B-202ENST00000373474 PDCL2Q8N4E4 241 aa16.83■□□□□ 0.29
LMX1B-202ENST00000373474 ZSCAN31Q96LW9 406 aaPredicted RBP16.83■□□□□ 0.29
LMX1B-202ENST00000373474 BCL11BQ9C0K0 894 aaPredicted RBP16.83■□□□□ 0.29
LMX1B-202ENST00000373474 KRT85P78386 507 aa16.83■□□□□ 0.28
LMX1B-202ENST00000373474 ALDH1L2Q3SY69 923 aa16.83■□□□□ 0.28
LMX1B-202ENST00000373474 KIF6Q6ZMV9 814 aa16.83■□□□□ 0.28
LMX1B-202ENST00000373474 ABCC11Q96J66 1382 aa16.82■□□□□ 0.28
LMX1B-202ENST00000373474 FYB1O15117 783 aa16.82■□□□□ 0.28
LMX1B-202ENST00000373474 ODF2Q5BJF6 829 aa16.82■□□□□ 0.28
LMX1B-202ENST00000373474 CCDC158Q5M9N0 1113 aa16.82■□□□□ 0.28
LMX1B-202ENST00000373474 PDRG1Q9NUG6 133 aa16.82■□□□□ 0.28
LMX1B-202ENST00000373474 LRPPRCP42704 1394 aaKnown RBP16.82■□□□□ 0.28
LMX1B-202ENST00000373474 GOLGA6L10A6NI86 522 aa16.82■□□□□ 0.28
LMX1B-202ENST00000373474 KDM4AO75164 1064 aa16.82■□□□□ 0.28
LMX1B-202ENST00000373474 ERLIN2O94905 339 aa16.82■□□□□ 0.28
LMX1B-202ENST00000373474 CEBPZQ03701 1054 aaKnown RBP16.82■□□□□ 0.28
LMX1B-202ENST00000373474 HSP90AB2PQ58FF8 381 aa16.82■□□□□ 0.28
LMX1B-202ENST00000373474 CCDC112Q8NEF3 446 aa16.82■□□□□ 0.28
LMX1B-202ENST00000373474 STK3Q13188 491 aa16.81■□□□□ 0.28
LMX1B-202ENST00000373474 ESCO1Q5FWF5 840 aa16.81■□□□□ 0.28
LMX1B-202ENST00000373474 FILIP1LQ4L180 1135 aa16.81■□□□□ 0.28
LMX1B-202ENST00000373474 LARP1BQ659C4 914 aaKnown RBP16.81■□□□□ 0.28
LMX1B-202ENST00000373474 UQCRHLA0A096LP55 91 aa16.8■□□□□ 0.28
LMX1B-202ENST00000373474 UQCRHP07919 91 aa16.8■□□□□ 0.28
LMX1B-202ENST00000373474 OFD1O75665 1012 aa16.8■□□□□ 0.28
LMX1B-202ENST00000373474 RBM33Q96EV2 1170 aaKnown RBP16.8■□□□□ 0.28
LMX1B-202ENST00000373474 RRS1Q15050 365 aaKnown RBP16.8■□□□□ 0.28
LMX1B-202ENST00000373474 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.8■□□□□ 0.28
LMX1B-202ENST00000373474 JMYQ8N9B5 988 aa16.8■□□□□ 0.28
LMX1B-202ENST00000373474 CTDP1Q9Y5B0 961 aaPredicted RBP16.8■□□□□ 0.28
LMX1B-202ENST00000373474 TATP17735 454 aaPredicted RBP16.79■□□□□ 0.28
LMX1B-202ENST00000373474 AACSQ86V21 672 aa16.79■□□□□ 0.28
LMX1B-202ENST00000373474 ESPNB1AK53 854 aa16.79■□□□□ 0.28
LMX1B-202ENST00000373474 PIP4K2AP48426 406 aaPredicted RBP16.79■□□□□ 0.28
LMX1B-202ENST00000373474 STK11IPQ8N1F8 1099 aa16.79■□□□□ 0.28
LMX1B-202ENST00000373474 FMNL2Q96PY5 1086 aa16.78■□□□□ 0.28
LMX1B-202ENST00000373474 SIL1Q9H173 461 aa16.78■□□□□ 0.28
LMX1B-202ENST00000373474 JAKMIP1Q96N16 626 aaKnown RBP16.78■□□□□ 0.28
LMX1B-202ENST00000373474 SRGAP3O43295 1099 aa16.78■□□□□ 0.28
LMX1B-202ENST00000373474 LAMC3Q9Y6N6 1575 aa16.78■□□□□ 0.28
LMX1B-202ENST00000373474 PDIA4P13667 645 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms