RNA–Protein interactions for RNA: ENST00000373381.8

CSMD2-205, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSMD2, Length 13,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-205ENST00000373381 STK38Q15208 465 aa10.69□□□□□ -0.7
CSMD2-205ENST00000373381 CARMIL1Q5VZK9 1371 aa10.69□□□□□ -0.7
CSMD2-205ENST00000373381 PLEKHO1Q53GL0 409 aaPredicted RBP10.69□□□□□ -0.7
CSMD2-205ENST00000373381 GSTTP1A0A1W2PQM5 241 aa10.69□□□□□ -0.7
CSMD2-205ENST00000373381 LRRFIP2Q9Y608 721 aaKnown RBP10.69□□□□□ -0.7
CSMD2-205ENST00000373381 NOC2LQ9Y3T9 749 aaKnown RBP10.69□□□□□ -0.7
CSMD2-205ENST00000373381 NUTM2BA6NNL0 878 aaPredicted RBP10.69□□□□□ -0.7
CSMD2-205ENST00000373381 NUTM2EB1AL46 878 aaPredicted RBP10.69□□□□□ -0.7
CSMD2-205ENST00000373381 USP8P40818 1118 aa10.69□□□□□ -0.7
CSMD2-205ENST00000373381 NUTM2AQ8IVF1 878 aaPredicted RBP10.69□□□□□ -0.7
CSMD2-205ENST00000373381 MINK1Q8N4C8 1332 aaPredicted RBP10.69□□□□□ -0.7
CSMD2-205ENST00000373381 CBFA2T2O43439 604 aa10.68□□□□□ -0.7
CSMD2-205ENST00000373381 LRRCC1Q9C099 1032 aa10.68□□□□□ -0.7
CSMD2-205ENST00000373381 RBM19Q9Y4C8 960 aaKnown RBP10.68□□□□□ -0.7
CSMD2-205ENST00000373381 CRACR2BQ8N4Y2 399 aaPredicted RBP10.68□□□□□ -0.7
CSMD2-205ENST00000373381 KIAA1328Q86T90 577 aa10.68□□□□□ -0.7
CSMD2-205ENST00000373381 VTI1AQ96AJ9 217 aa10.68□□□□□ -0.7
CSMD2-205ENST00000373381 RIPK4P57078 832 aa10.68□□□□□ -0.7
CSMD2-205ENST00000373381 BCL2L13Q9BXK5 485 aa10.68□□□□□ -0.7
CSMD2-205ENST00000373381 TAF3Q5VWG9 929 aa10.68□□□□□ -0.7
CSMD2-205ENST00000373381 NUP133Q8WUM0 1156 aa10.68□□□□□ -0.7
CSMD2-205ENST00000373381 KIF4AO95239 1232 aa10.67□□□□□ -0.7
CSMD2-205ENST00000373381 USP5P45974 858 aa10.67□□□□□ -0.7
CSMD2-205ENST00000373381 GCOM1H8Y6P7 765 aaPredicted RBP10.67□□□□□ -0.7
CSMD2-205ENST00000373381 MYZAPP0CAP1 466 aa10.67□□□□□ -0.7
CSMD2-205ENST00000373381 PIP4K2BP78356 416 aa10.67□□□□□ -0.7
CSMD2-205ENST00000373381 CCDC30Q5VVM6 783 aa10.67□□□□□ -0.7
CSMD2-205ENST00000373381 CTNNA2P26232 953 aa10.67□□□□□ -0.7
CSMD2-205ENST00000373381 ABTB2Q8N961 1025 aa10.67□□□□□ -0.7
CSMD2-205ENST00000373381 GIMAP7Q8NHV1 300 aa10.67□□□□□ -0.7
CSMD2-205ENST00000373381 IMMTQ16891 758 aaKnown RBP10.67□□□□□ -0.7
CSMD2-205ENST00000373381 WASF1Q92558 559 aa10.67□□□□□ -0.7
CSMD2-205ENST00000373381 UQCRHLA0A096LP55 91 aa10.66□□□□□ -0.7
CSMD2-205ENST00000373381 SLF2Q8IX21 1173 aa10.66□□□□□ -0.7
CSMD2-205ENST00000373381 CETN1Q12798 172 aa10.66□□□□□ -0.7
CSMD2-205ENST00000373381 CEP131Q9UPN4 1083 aa10.66□□□□□ -0.7
CSMD2-205ENST00000373381 FGFR1OPO95684 399 aaKnown RBP10.66□□□□□ -0.7
CSMD2-205ENST00000373381 CEP57L1Q8IYX8 460 aa10.66□□□□□ -0.7
CSMD2-205ENST00000373381 GAS2L2Q8NHY3 880 aa10.66□□□□□ -0.7
CSMD2-205ENST00000373381 CTNNBL1Q8WYA6 563 aaPredicted RBP10.66□□□□□ -0.7
CSMD2-205ENST00000373381 PDS5BQ9NTI5 1447 aa10.66□□□□□ -0.7
CSMD2-205ENST00000373381 SMC1AQ14683 1233 aaKnown RBP10.66□□□□□ -0.7
CSMD2-205ENST00000373381 ZPR1O75312 459 aa10.66□□□□□ -0.7
CSMD2-205ENST00000373381 CABP4P57796 275 aa10.66□□□□□ -0.7
CSMD2-205ENST00000373381 ZNF652Q9Y2D9 606 aa10.66□□□□□ -0.7
CSMD2-205ENST00000373381 ANKRD1Q15327 319 aa10.66□□□□□ -0.7
CSMD2-205ENST00000373381 MPHOSPH9Q99550 1183 aa10.66□□□□□ -0.7
CSMD2-205ENST00000373381 ACTN2P35609 894 aa10.66□□□□□ -0.7
CSMD2-205ENST00000373381 IGHMBP2P38935 993 aaKnown RBP10.65□□□□□ -0.7
CSMD2-205ENST00000373381 PRPF31Q8WWY3 499 aaKnown RBP10.65□□□□□ -0.7
CSMD2-205ENST00000373381 PUS7Q96PZ0 661 aaKnown RBP10.65□□□□□ -0.7
CSMD2-205ENST00000373381 TAOK3Q9H2K8 898 aa10.65□□□□□ -0.7
CSMD2-205ENST00000373381 TDO2P48775 406 aa10.65□□□□□ -0.7
CSMD2-205ENST00000373381 FAM43AQ8N2R8 423 aa10.65□□□□□ -0.7
CSMD2-205ENST00000373381 FMNL2Q96PY5 1086 aa10.65□□□□□ -0.7
CSMD2-205ENST00000373381 TSG101Q99816 390 aa10.65□□□□□ -0.7
CSMD2-205ENST00000373381 GTPBP4Q9BZE4 634 aaKnown RBP10.65□□□□□ -0.7
CSMD2-205ENST00000373381 TATP17735 454 aaPredicted RBP10.65□□□□□ -0.7
CSMD2-205ENST00000373381 ODF2LQ9ULJ1 636 aa10.65□□□□□ -0.7
CSMD2-205ENST00000373381 CUX2O14529 1486 aa10.65□□□□□ -0.7
CSMD2-205ENST00000373381 CFAP45Q9UL16 551 aa10.65□□□□□ -0.71
CSMD2-205ENST00000373381 LARP1Q6PKG0 1096 aaKnown RBP10.65□□□□□ -0.71
CSMD2-205ENST00000373381 CCDC117Q8IWD4 279 aaPredicted RBP10.65□□□□□ -0.71
CSMD2-205ENST00000373381 TIGD1Q96MW7 591 aa10.64□□□□□ -0.71
CSMD2-205ENST00000373381 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.64□□□□□ -0.71
CSMD2-205ENST00000373381 V9GYY5 206 aaPredicted RBP10.64□□□□□ -0.71
CSMD2-205ENST00000373381 MCM2P49736 904 aa10.64□□□□□ -0.71
CSMD2-205ENST00000373381 ANKIB1Q9P2G1 1089 aa10.64□□□□□ -0.71
CSMD2-205ENST00000373381 ARL1P40616 181 aaPredicted RBP10.64□□□□□ -0.71
CSMD2-205ENST00000373381 EIF5P55010 431 aaKnown RBP10.64□□□□□ -0.71
CSMD2-205ENST00000373381 TTC21AQ8NDW8 1320 aa10.64□□□□□ -0.71
CSMD2-205ENST00000373381 MACROD2A1Z1Q3 448 aa10.64□□□□□ -0.71
CSMD2-205ENST00000373381 ME1P48163 572 aa10.64□□□□□ -0.71
CSMD2-205ENST00000373381 HNRNPMP52272 730 aaKnown RBP eCLIP10.64□□□□□ -0.71
CSMD2-205ENST00000373381 UTP14AQ9BVJ6 771 aaKnown RBP10.64□□□□□ -0.71
CSMD2-205ENST00000373381 PANK3Q9H999 370 aa10.64□□□□□ -0.71
CSMD2-205ENST00000373381 RAB34Q9BZG1 259 aa10.64□□□□□ -0.71
CSMD2-205ENST00000373381 ZNF354CQ86Y25 554 aa10.64□□□□□ -0.71
CSMD2-205ENST00000373381 HMGB1P1B2RPK0 211 aaPredicted RBP10.63□□□□□ -0.71
CSMD2-205ENST00000373381 FAM193AP78312 1265 aa10.63□□□□□ -0.71
CSMD2-205ENST00000373381 SPA17Q15506 151 aa10.63□□□□□ -0.71
CSMD2-205ENST00000373381 TOM1L2Q6ZVM7 507 aa10.63□□□□□ -0.71
CSMD2-205ENST00000373381 ESCO1Q5FWF5 840 aa10.63□□□□□ -0.71
CSMD2-205ENST00000373381 CCDC82Q8N4S0 544 aa10.63□□□□□ -0.71
CSMD2-205ENST00000373381 LRP2BPQ9P2M1 347 aa10.63□□□□□ -0.71
CSMD2-205ENST00000373381 SPG7Q9UQ90 795 aa10.63□□□□□ -0.71
CSMD2-205ENST00000373381 UBE4AQ14139 1066 aa10.63□□□□□ -0.71
CSMD2-205ENST00000373381 CYB5RLQ6IPT4 315 aa10.63□□□□□ -0.71
CSMD2-205ENST00000373381 ATF7IPQ6VMQ6 1270 aa10.63□□□□□ -0.71
CSMD2-205ENST00000373381 CCDC148Q8NFR7 591 aa10.63□□□□□ -0.71
CSMD2-205ENST00000373381 PRDM2Q13029 1718 aa10.63□□□□□ -0.71
CSMD2-205ENST00000373381 MYBBP1AQ9BQG0 1328 aaKnown RBP10.63□□□□□ -0.71
CSMD2-205ENST00000373381 GNAI3P08754 354 aa10.63□□□□□ -0.71
CSMD2-205ENST00000373381 SH3BP5O60239 455 aa10.63□□□□□ -0.71
CSMD2-205ENST00000373381 CTNNA3Q9UI47 895 aa10.63□□□□□ -0.71
CSMD2-205ENST00000373381 RRBP1Q9P2E9 1410 aaKnown RBP10.62□□□□□ -0.71
CSMD2-205ENST00000373381 CAVIN1Q6NZI2 390 aaKnown RBP10.62□□□□□ -0.71
CSMD2-205ENST00000373381 MAP9Q49MG5 647 aa10.62□□□□□ -0.71
CSMD2-205ENST00000373381 TAF12Q16514 161 aa10.62□□□□□ -0.71
CSMD2-205ENST00000373381 UQCRHP07919 91 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms