RNA–Protein interactions for RNA: ENST00000373088.5

PCDH11X-204, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-204ENST00000373088 USP35Q9P2H5 1018 aa5.81□□□□□ -1.48
PCDH11X-204ENST00000373088 LRRC59Q96AG4 307 aaKnown RBP5.81□□□□□ -1.48
PCDH11X-204ENST00000373088 NKTRP30414 1462 aaKnown RBP5.81□□□□□ -1.48
PCDH11X-204ENST00000373088 GCP02774 474 aa5.81□□□□□ -1.48
PCDH11X-204ENST00000373088 EIF2S2P20042 333 aaKnown RBP5.81□□□□□ -1.48
PCDH11X-204ENST00000373088 TEFQ10587 303 aa5.81□□□□□ -1.48
PCDH11X-204ENST00000373088 C1orf141Q5JVX7 400 aa5.81□□□□□ -1.48
PCDH11X-204ENST00000373088 GAS2L2Q8NHY3 880 aa5.81□□□□□ -1.48
PCDH11X-204ENST00000373088 PLEKHF1Q96S99 279 aa5.81□□□□□ -1.48
PCDH11X-204ENST00000373088 ATP7BP35670 1465 aa5.81□□□□□ -1.48
PCDH11X-204ENST00000373088 ZNF521Q96K83 1311 aa5.8□□□□□ -1.48
PCDH11X-204ENST00000373088 USP6P35125 1406 aa5.8□□□□□ -1.48
PCDH11X-204ENST00000373088 TMEM94Q12767 1356 aa5.8□□□□□ -1.48
PCDH11X-204ENST00000373088 RIMS1Q86UR5 1692 aaKnown RBP5.8□□□□□ -1.48
PCDH11X-204ENST00000373088 APBB1O00213 710 aa5.8□□□□□ -1.48
PCDH11X-204ENST00000373088 HOXC9P31274 260 aa5.8□□□□□ -1.48
PCDH11X-204ENST00000373088 ANP32AP39687 249 aaKnown RBP5.8□□□□□ -1.48
PCDH11X-204ENST00000373088 EVA1CP58658 441 aa5.8□□□□□ -1.48
PCDH11X-204ENST00000373088 CCDC27Q2M243 656 aa5.8□□□□□ -1.48
PCDH11X-204ENST00000373088 RAPGEF4Q8WZA2 1011 aa5.8□□□□□ -1.48
PCDH11X-204ENST00000373088 STK31Q9BXU1 1019 aa5.8□□□□□ -1.48
PCDH11X-204ENST00000373088 MTHFSDQ2M296 383 aaKnown RBP5.8□□□□□ -1.48
PCDH11X-204ENST00000373088 KRT24Q2M2I5 525 aa5.8□□□□□ -1.48
PCDH11X-204ENST00000373088 ZNF530Q6P9A1 599 aaPredicted RBP5.8□□□□□ -1.48
PCDH11X-204ENST00000373088 STRN4Q9NRL3 753 aa5.8□□□□□ -1.48
PCDH11X-204ENST00000373088 MBIPQ9NS73 344 aa5.8□□□□□ -1.48
PCDH11X-204ENST00000373088 ARHGEF28Q8N1W1 1705 aaKnown RBP5.8□□□□□ -1.48
PCDH11X-204ENST00000373088 IFT172Q9UG01 1749 aa5.8□□□□□ -1.48
PCDH11X-204ENST00000373088 TSPYL6Q8N831 410 aa5.79□□□□□ -1.48
PCDH11X-204ENST00000373088 ARXQ96QS3 562 aa5.79□□□□□ -1.48
PCDH11X-204ENST00000373088 MSH6P52701 1360 aa5.79□□□□□ -1.48
PCDH11X-204ENST00000373088 CPSF1Q10570 1443 aaKnown RBP5.79□□□□□ -1.48
PCDH11X-204ENST00000373088 DLC1Q96QB1 1528 aa5.79□□□□□ -1.48
PCDH11X-204ENST00000373088 RWDD1Q9H446 243 aaPredicted RBP5.79□□□□□ -1.48
PCDH11X-204ENST00000373088 PRDM11Q9NQV5 511 aa5.79□□□□□ -1.48
PCDH11X-204ENST00000373088 FLT4P35916 1363 aa5.79□□□□□ -1.48
PCDH11X-204ENST00000373088 PIK3R4Q99570 1358 aa5.79□□□□□ -1.48
PCDH11X-204ENST00000373088 FER1L4A9Z1Z3 1794 aa5.79□□□□□ -1.48
PCDH11X-204ENST00000373088 TECPR2O15040 1411 aa5.79□□□□□ -1.48
PCDH11X-204ENST00000373088 PDE3AQ14432 1141 aa5.79□□□□□ -1.48
PCDH11X-204ENST00000373088 INSRP06213 1382 aa5.79□□□□□ -1.48
PCDH11X-204ENST00000373088 CD163L1Q9NR16 1453 aa5.79□□□□□ -1.48
PCDH11X-204ENST00000373088 ATF7IPQ6VMQ6 1270 aa5.79□□□□□ -1.48
PCDH11X-204ENST00000373088 CENPQQ7L2Z9 268 aaPredicted RBP5.79□□□□□ -1.48
PCDH11X-204ENST00000373088 ANKRD24Q8TF21 1146 aa5.79□□□□□ -1.48
PCDH11X-204ENST00000373088 RNF123Q5XPI4 1314 aa5.78□□□□□ -1.48
PCDH11X-204ENST00000373088 ZNF335Q9H4Z2 1342 aaPredicted RBP5.78□□□□□ -1.48
PCDH11X-204ENST00000373088 GNAT3A8MTJ3 354 aa5.78□□□□□ -1.48
PCDH11X-204ENST00000373088 RLBP1P12271 317 aa5.78□□□□□ -1.48
PCDH11X-204ENST00000373088 PLEKHO1Q53GL0 409 aaPredicted RBP5.78□□□□□ -1.48
PCDH11X-204ENST00000373088 MPRIPQ6WCQ1 1025 aa5.78□□□□□ -1.48
PCDH11X-204ENST00000373088 C8orf58Q8NAV2 365 aa5.78□□□□□ -1.48
PCDH11X-204ENST00000373088 CFAP44Q96MT7 982 aa5.78□□□□□ -1.48
PCDH11X-204ENST00000373088 IFT57Q9NWB7 429 aa5.78□□□□□ -1.48
PCDH11X-204ENST00000373088 CPS1P31327 1500 aa5.78□□□□□ -1.48
PCDH11X-204ENST00000373088 CEP170BQ9Y4F5 1589 aaPredicted RBP5.78□□□□□ -1.48
PCDH11X-204ENST00000373088 PIP4K2BP78356 416 aa5.78□□□□□ -1.48
PCDH11X-204ENST00000373088 C1orf115Q9H7X2 142 aa5.78□□□□□ -1.48
PCDH11X-204ENST00000373088 KIF16BQ96L93 1317 aa5.78□□□□□ -1.48
PCDH11X-204ENST00000373088 SLC4A2P04920 1241 aa5.78□□□□□ -1.48
PCDH11X-204ENST00000373088 TRMT2AQ8IZ69 625 aaKnown RBP5.78□□□□□ -1.48
PCDH11X-204ENST00000373088 TMEM57Q8N5G2 664 aa5.78□□□□□ -1.48
PCDH11X-204ENST00000373088 IP6K1Q92551 441 aa5.78□□□□□ -1.48
PCDH11X-204ENST00000373088 CCDC9Q9Y3X0 531 aaKnown RBP5.78□□□□□ -1.48
PCDH11X-204ENST00000373088 NPHP3Q7Z494 1330 aa5.77□□□□□ -1.49
PCDH11X-204ENST00000373088 AATKQ6ZMQ8 1374 aa5.77□□□□□ -1.49
PCDH11X-204ENST00000373088 KDM4FA0A1W2PPD8 638 aa5.77□□□□□ -1.49
PCDH11X-204ENST00000373088 TRIM27P14373 513 aa5.77□□□□□ -1.49
PCDH11X-204ENST00000373088 MYT1Q01538 1121 aa5.77□□□□□ -1.49
PCDH11X-204ENST00000373088 NBPF6Q5VWK0 638 aa5.77□□□□□ -1.49
PCDH11X-204ENST00000373088 TOM1L2Q6ZVM7 507 aa5.77□□□□□ -1.49
PCDH11X-204ENST00000373088 NBPF4Q96M43 638 aa5.77□□□□□ -1.49
PCDH11X-204ENST00000373088 DDX19BQ9UMR2 479 aa5.77□□□□□ -1.49
PCDH11X-204ENST00000373088 ARHGAP23Q9P227 1491 aa5.77□□□□□ -1.49
PCDH11X-204ENST00000373088 C3P01024 1663 aa5.77□□□□□ -1.49
PCDH11X-204ENST00000373088 SBNO1A3KN83 1393 aa5.77□□□□□ -1.49
PCDH11X-204ENST00000373088 FKBP5Q13451 457 aaPredicted RBP5.77□□□□□ -1.49
PCDH11X-204ENST00000373088 ZNF428Q96B54 188 aa5.77□□□□□ -1.49
PCDH11X-204ENST00000373088 MYO3AQ8NEV4 1616 aa5.77□□□□□ -1.49
PCDH11X-204ENST00000373088 SLAIN2Q9P270 581 aa5.77□□□□□ -1.49
PCDH11X-204ENST00000373088 ZNF330Q9Y3S2 320 aaPredicted RBP5.77□□□□□ -1.49
PCDH11X-204ENST00000373088 MYOM1P52179 1685 aa5.77□□□□□ -1.49
PCDH11X-204ENST00000373088 IL16Q14005 1332 aa5.77□□□□□ -1.49
PCDH11X-204ENST00000373088 PTCH1Q13635 1447 aa5.76□□□□□ -1.49
PCDH11X-204ENST00000373088 CT47B1P0C2W7 299 aaPredicted RBP5.76□□□□□ -1.49
PCDH11X-204ENST00000373088 TATP17735 454 aaPredicted RBP5.76□□□□□ -1.49
PCDH11X-204ENST00000373088 MVPQ14764 893 aaKnown RBP5.76□□□□□ -1.49
PCDH11X-204ENST00000373088 API5Q9BZZ5 524 aaKnown RBP5.76□□□□□ -1.49
PCDH11X-204ENST00000373088 UBR1Q8IWV7 1749 aa5.76□□□□□ -1.49
PCDH11X-204ENST00000373088 SLIT1O75093 1534 aa5.76□□□□□ -1.49
PCDH11X-204ENST00000373088 NUTM2BA6NNL0 878 aaPredicted RBP5.76□□□□□ -1.49
PCDH11X-204ENST00000373088 NUTM2EB1AL46 878 aaPredicted RBP5.76□□□□□ -1.49
PCDH11X-204ENST00000373088 NUTM2AQ8IVF1 878 aaPredicted RBP5.76□□□□□ -1.49
PCDH11X-204ENST00000373088 DDX54Q8TDD1 881 aaKnown RBP5.76□□□□□ -1.49
PCDH11X-204ENST00000373088 CHMP4BQ9H444 224 aaKnown RBP5.76□□□□□ -1.49
PCDH11X-204ENST00000373088 PNPLA6Q8IY17 1366 aa5.76□□□□□ -1.49
PCDH11X-204ENST00000373088 VAMP4O75379 141 aa5.76□□□□□ -1.49
PCDH11X-204ENST00000373088 PDE4AP27815 886 aa5.76□□□□□ -1.49
PCDH11X-204ENST00000373088 SETD1BQ9UPS6 1966 aaKnown RBP5.75□□□□□ -1.49
PCDH11X-204ENST00000373088 IGHDP01880 384 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms