RNA–Protein interactions for RNA: ENST00000372739.5

SPTAN1-203, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPTAN1, Length 7,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-203ENST00000372739 CAVIN1Q6NZI2 390 aaKnown RBP11.19□□□□□ -0.62
SPTAN1-203ENST00000372739 CCDC191Q8NCU4 936 aa11.19□□□□□ -0.62
SPTAN1-203ENST00000372739 NOB1Q9ULX3 412 aaKnown RBP11.19□□□□□ -0.62
SPTAN1-203ENST00000372739 THEMISQ8N1K5 641 aaPredicted RBP11.18□□□□□ -0.62
SPTAN1-203ENST00000372739 STRN4Q9NRL3 753 aa11.18□□□□□ -0.62
SPTAN1-203ENST00000372739 HMGB2P26583 209 aaKnown RBP11.18□□□□□ -0.62
SPTAN1-203ENST00000372739 KDM4AO75164 1064 aa11.18□□□□□ -0.62
SPTAN1-203ENST00000372739 TRAK2O60296 914 aa11.18□□□□□ -0.62
SPTAN1-203ENST00000372739 MAP7D2Q96T17 732 aa11.18□□□□□ -0.62
SPTAN1-203ENST00000372739 AQRO60306 1485 aaKnown RBP eCLIP11.18□□□□□ -0.623e-7■■■□□ 18.7
SPTAN1-203ENST00000372739 EXOSC9Q06265 439 aaKnown RBP11.18□□□□□ -0.62
SPTAN1-203ENST00000372739 ZRSR2Q15696 482 aaKnown RBP11.18□□□□□ -0.62
SPTAN1-203ENST00000372739 C9orf84Q5VXU9 1444 aa11.18□□□□□ -0.62
SPTAN1-203ENST00000372739 ATP2B1P20020 1258 aa11.17□□□□□ -0.62
SPTAN1-203ENST00000372739 CDKL5O76039 1030 aa11.17□□□□□ -0.62
SPTAN1-203ENST00000372739 SLC4A2P04920 1241 aa11.17□□□□□ -0.62
SPTAN1-203ENST00000372739 CCDC57Q2TAC2 916 aa11.17□□□□□ -0.62
SPTAN1-203ENST00000372739 CDK19Q9BWU1 502 aa11.17□□□□□ -0.62
SPTAN1-203ENST00000372739 CFAP70Q5T0N1 1121 aa11.17□□□□□ -0.62
SPTAN1-203ENST00000372739 VSIG10Q8N0Z9 540 aa11.17□□□□□ -0.62
SPTAN1-203ENST00000372739 PEG3Q9GZU2 1588 aa11.16□□□□□ -0.62
SPTAN1-203ENST00000372739 BRPF1P55201 1214 aaPredicted RBP11.16□□□□□ -0.62
SPTAN1-203ENST00000372739 ATP2B2Q01814 1243 aa11.16□□□□□ -0.62
SPTAN1-203ENST00000372739 WDR63Q8IWG1 891 aa11.16□□□□□ -0.62
SPTAN1-203ENST00000372739 MPHOSPH8Q99549 860 aa11.16□□□□□ -0.62
SPTAN1-203ENST00000372739 RNF214Q8ND24 703 aa11.16□□□□□ -0.62
SPTAN1-203ENST00000372739 PDZRN3Q9UPQ7 1066 aa11.16□□□□□ -0.62
SPTAN1-203ENST00000372739 CCDC192P0DO97 292 aa11.16□□□□□ -0.62
SPTAN1-203ENST00000372739 NOL7Q9UMY1 257 aaKnown RBP11.16□□□□□ -0.62
SPTAN1-203ENST00000372739 SOGA3Q5TF21 947 aa11.16□□□□□ -0.62
SPTAN1-203ENST00000372739 TOM1L2Q6ZVM7 507 aa11.16□□□□□ -0.62
SPTAN1-203ENST00000372739 CALRP27797 417 aaKnown RBP11.16□□□□□ -0.62
SPTAN1-203ENST00000372739 KIAA1107Q9UPP5 1409 aa11.16□□□□□ -0.62
SPTAN1-203ENST00000372739 PRPF40AO75400 957 aaKnown RBP11.16□□□□□ -0.62
SPTAN1-203ENST00000372739 WDR33Q9C0J8 1336 aaKnown RBP11.15□□□□□ -0.62
SPTAN1-203ENST00000372739 SERPINC1P01008 464 aa11.15□□□□□ -0.62
SPTAN1-203ENST00000372739 PPFIBP1Q86W92 1011 aa11.15□□□□□ -0.62
SPTAN1-203ENST00000372739 H0YHG0 523 aa11.15□□□□□ -0.62
SPTAN1-203ENST00000372739 ANKRD18AQ8IVF6 992 aa11.15□□□□□ -0.62
SPTAN1-203ENST00000372739 GOLGA6L10A6NI86 522 aa11.15□□□□□ -0.62
SPTAN1-203ENST00000372739 RTEL1-TNFRSF6BF6WH68 1400 aa11.15□□□□□ -0.62
SPTAN1-203ENST00000372739 FIBPO43427 364 aa11.15□□□□□ -0.62
SPTAN1-203ENST00000372739 SULT6B1Q6IMI4 303 aa11.15□□□□□ -0.62
SPTAN1-203ENST00000372739 C1orf115Q9H7X2 142 aa11.15□□□□□ -0.62
SPTAN1-203ENST00000372739 FMNL2Q96PY5 1086 aa11.15□□□□□ -0.63
SPTAN1-203ENST00000372739 PDIA4P13667 645 aaKnown RBP11.14□□□□□ -0.63
SPTAN1-203ENST00000372739 SLC52A1Q9NWF4 448 aa11.14□□□□□ -0.63
SPTAN1-203ENST00000372739 CBFA2T2O43439 604 aa11.14□□□□□ -0.63
SPTAN1-203ENST00000372739 HMGN5P82970 282 aaKnown RBP11.14□□□□□ -0.63
SPTAN1-203ENST00000372739 PRG4Q92954 1404 aaPredicted RBP11.14□□□□□ -0.63
SPTAN1-203ENST00000372739 CTNNA3Q9UI47 895 aa11.14□□□□□ -0.63
SPTAN1-203ENST00000372739 ZNF530Q6P9A1 599 aaPredicted RBP11.14□□□□□ -0.63
SPTAN1-203ENST00000372739 TNMDQ9H2S6 317 aa11.14□□□□□ -0.63
SPTAN1-203ENST00000372739 DEF6Q9H4E7 631 aa11.14□□□□□ -0.63
SPTAN1-203ENST00000372739 CEBPZQ03701 1054 aaKnown RBP11.14□□□□□ -0.63
SPTAN1-203ENST00000372739 KRT85P78386 507 aa11.14□□□□□ -0.63
SPTAN1-203ENST00000372739 PDCL3Q9H2J4 239 aa11.14□□□□□ -0.63
SPTAN1-203ENST00000372739 ME1P48163 572 aa11.13□□□□□ -0.63
SPTAN1-203ENST00000372739 ERBINQ96RT1 1412 aa11.13□□□□□ -0.63
SPTAN1-203ENST00000372739 AFAP1Q8N556 730 aa11.13□□□□□ -0.63
SPTAN1-203ENST00000372739 POGZQ7Z3K3 1410 aa11.13□□□□□ -0.63
SPTAN1-203ENST00000372739 DNMBPQ6XZF7 1577 aa11.13□□□□□ -0.63
SPTAN1-203ENST00000372739 SIL1Q9H173 461 aa11.13□□□□□ -0.63
SPTAN1-203ENST00000372739 CFAP45Q9UL16 551 aa11.13□□□□□ -0.63
SPTAN1-203ENST00000372739 KRT32Q14532 448 aa11.12□□□□□ -0.63
SPTAN1-203ENST00000372739 SEPT7Q16181 437 aaKnown RBP11.12□□□□□ -0.63
SPTAN1-203ENST00000372739 DESP17661 470 aa11.12□□□□□ -0.63
SPTAN1-203ENST00000372739 BMP2KQ9NSY1 1161 aaPredicted RBP11.12□□□□□ -0.63
SPTAN1-203ENST00000372739 ATAD2Q6PL18 1390 aa11.12□□□□□ -0.63
SPTAN1-203ENST00000372739 MYL6BP14649 208 aa11.12□□□□□ -0.63
SPTAN1-203ENST00000372739 CCDC181Q5TID7 509 aa11.12□□□□□ -0.63
SPTAN1-203ENST00000372739 LEKR1Q6ZMV7 388 aa11.12□□□□□ -0.63
SPTAN1-203ENST00000372739 WASF1Q92558 559 aa11.12□□□□□ -0.63
SPTAN1-203ENST00000372739 RPGRIP1LQ68CZ1 1315 aa11.12□□□□□ -0.63
SPTAN1-203ENST00000372739 BTBD11A6QL63 1104 aa11.12□□□□□ -0.63
SPTAN1-203ENST00000372739 RBM5P52756 815 aaKnown RBP eCLIP11.12□□□□□ -0.63
SPTAN1-203ENST00000372739 K7ELQ4 463 aaPredicted RBP11.12□□□□□ -0.63
SPTAN1-203ENST00000372739 NEFHP12036 1026 aa11.12□□□□□ -0.63
SPTAN1-203ENST00000372739 IQCEQ6IPM2 695 aa11.12□□□□□ -0.63
SPTAN1-203ENST00000372739 DDX54Q8TDD1 881 aaKnown RBP11.12□□□□□ -0.63
SPTAN1-203ENST00000372739 ATF7IPQ6VMQ6 1270 aa11.11□□□□□ -0.63
SPTAN1-203ENST00000372739 TANGO6Q9C0B7 1094 aa11.11□□□□□ -0.63
SPTAN1-203ENST00000372739 CCDC66A2RUB6 948 aa11.11□□□□□ -0.63
SPTAN1-203ENST00000372739 AACSQ86V21 672 aa11.11□□□□□ -0.63
SPTAN1-203ENST00000372739 ZHX3Q9H4I2 956 aa11.11□□□□□ -0.63
SPTAN1-203ENST00000372739 STK3Q13188 491 aa11.11□□□□□ -0.63
SPTAN1-203ENST00000372739 AXDND1Q5T1B0 1012 aaPredicted RBP11.11□□□□□ -0.63
SPTAN1-203ENST00000372739 NUP133Q8WUM0 1156 aa11.11□□□□□ -0.63
SPTAN1-203ENST00000372739 ZNF428Q96B54 188 aa11.11□□□□□ -0.63
SPTAN1-203ENST00000372739 ZSCAN31Q96LW9 406 aaPredicted RBP11.11□□□□□ -0.63
SPTAN1-203ENST00000372739 UBAC1Q9BSL1 405 aa11.11□□□□□ -0.63
SPTAN1-203ENST00000372739 CABP1Q9NZU7 370 aa11.11□□□□□ -0.63
SPTAN1-203ENST00000372739 FKBP4Q02790 459 aaKnown RBP eCLIP11.11□□□□□ -0.63
SPTAN1-203ENST00000372739 CDCA7LQ96GN5 454 aa11.11□□□□□ -0.63
SPTAN1-203ENST00000372739 TDO2P48775 406 aa11.11□□□□□ -0.63
SPTAN1-203ENST00000372739 BLOC1S2Q6QNY1 142 aa11.11□□□□□ -0.63
SPTAN1-203ENST00000372739 MVPQ14764 893 aaKnown RBP11.11□□□□□ -0.63
SPTAN1-203ENST00000372739 LARP1BQ659C4 914 aaKnown RBP11.11□□□□□ -0.63
SPTAN1-203ENST00000372739 TSR2Q969E8 191 aaKnown RBP11.11□□□□□ -0.63
SPTAN1-203ENST00000372739 SKIDA1Q1XH10 827 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms