RNA–Protein interactions for RNA: ENST00000372633.1

RAB40A-202, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 BASIC

Gene RAB40A, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-202ENST00000372633 SSFA2P28290 1259 aa17.03■□□□□ 0.32
RAB40A-202ENST00000372633 RBM42Q9BTD8 480 aaKnown RBP17.03■□□□□ 0.32
RAB40A-202ENST00000372633 SRPK2P78362 688 aaKnown RBP17.03■□□□□ 0.32
RAB40A-202ENST00000372633 GGT6Q6P531 493 aa17.03■□□□□ 0.32
RAB40A-202ENST00000372633 GOLGA6L22H0YM25 854 aa17.02■□□□□ 0.32
RAB40A-202ENST00000372633 TPM2P07951 284 aa17.02■□□□□ 0.32
RAB40A-202ENST00000372633 CDC45O75419 566 aa17.02■□□□□ 0.31
RAB40A-202ENST00000372633 BAG4O95429 457 aaKnown RBP17.02■□□□□ 0.31
RAB40A-202ENST00000372633 YEATS2Q9ULM3 1422 aa17.01■□□□□ 0.31
RAB40A-202ENST00000372633 NASPP49321 788 aaPredicted RBP17.01■□□□□ 0.31
RAB40A-202ENST00000372633 SAFB2Q14151 953 aaKnown RBP eCLIP17■□□□□ 0.31
RAB40A-202ENST00000372633 NUTM2DQ5VT03 806 aaPredicted RBP17■□□□□ 0.31
RAB40A-202ENST00000372633 FOXD4L1Q9NU39 408 aa17■□□□□ 0.31
RAB40A-202ENST00000372633 ZNF445P59923 1031 aa17■□□□□ 0.31
RAB40A-202ENST00000372633 CFAP44Q96MT7 982 aa17■□□□□ 0.31
RAB40A-202ENST00000372633 AK9Q5TCS8 1911 aa17■□□□□ 0.31
RAB40A-202ENST00000372633 KIF24Q5T7B8 1368 aa16.99■□□□□ 0.31
RAB40A-202ENST00000372633 CYP2E1P05181 493 aaPredicted RBP16.99■□□□□ 0.31
RAB40A-202ENST00000372633 ZNF853P0CG23 659 aa16.99■□□□□ 0.31
RAB40A-202ENST00000372633 CALD1Q05682 793 aaKnown RBP16.99■□□□□ 0.31
RAB40A-202ENST00000372633 C1orf115Q9H7X2 142 aa16.99■□□□□ 0.31
RAB40A-202ENST00000372633 PRKAR2BP31323 418 aa16.99■□□□□ 0.31
RAB40A-202ENST00000372633 RABEP1Q15276 862 aa16.99■□□□□ 0.31
RAB40A-202ENST00000372633 NFE2L2Q16236 605 aa16.99■□□□□ 0.31
RAB40A-202ENST00000372633 ZSCAN30Q86W11 494 aa16.99■□□□□ 0.31
RAB40A-202ENST00000372633 KNDC1Q76NI1 1749 aa16.99■□□□□ 0.31
RAB40A-202ENST00000372633 GSPT1P15170 499 aaKnown RBP16.99■□□□□ 0.31
RAB40A-202ENST00000372633 IFT57Q9NWB7 429 aa16.98■□□□□ 0.31
RAB40A-202ENST00000372633 DDX49Q9Y6V7 483 aaKnown RBP16.98■□□□□ 0.31
RAB40A-202ENST00000372633 TSPYL6Q8N831 410 aa16.98■□□□□ 0.31
RAB40A-202ENST00000372633 GNAI1P63096 354 aa16.97■□□□□ 0.31
RAB40A-202ENST00000372633 PLEKHM2Q8IWE5 1019 aa16.97■□□□□ 0.31
RAB40A-202ENST00000372633 MYO5BQ9ULV0 1848 aa16.97■□□□□ 0.31
RAB40A-202ENST00000372633 ARHGEF40Q8TER5 1519 aa16.97■□□□□ 0.31
RAB40A-202ENST00000372633 NUCB2P80303 420 aa16.96■□□□□ 0.31
RAB40A-202ENST00000372633 HDGFL2Q7Z4V5 671 aaPredicted RBP16.96■□□□□ 0.31
RAB40A-202ENST00000372633 HS1BP3Q53T59 392 aa16.96■□□□□ 0.31
RAB40A-202ENST00000372633 MAP2P11137 1827 aaKnown RBP16.96■□□□□ 0.31
RAB40A-202ENST00000372633 YTHDC2Q9H6S0 1430 aaKnown RBP16.96■□□□□ 0.31
RAB40A-202ENST00000372633 PHACTR3Q96KR7 559 aa16.96■□□□□ 0.31
RAB40A-202ENST00000372633 POLKQ9UBT6 870 aa16.96■□□□□ 0.31
RAB40A-202ENST00000372633 OFD1O75665 1012 aa16.95■□□□□ 0.3
RAB40A-202ENST00000372633 DCTPP1Q9H773 170 aa16.95■□□□□ 0.3
RAB40A-202ENST00000372633 STK26Q9P289 416 aa16.95■□□□□ 0.3
RAB40A-202ENST00000372633 TERF1P54274 439 aa16.95■□□□□ 0.3
RAB40A-202ENST00000372633 IDI1Q13907 227 aa16.95■□□□□ 0.3
RAB40A-202ENST00000372633 ANP32BQ92688 251 aaKnown RBP16.95■□□□□ 0.3
RAB40A-202ENST00000372633 MINK1Q8N4C8 1332 aaPredicted RBP16.94■□□□□ 0.3
RAB40A-202ENST00000372633 USP26Q9BXU7 913 aa16.94■□□□□ 0.3
RAB40A-202ENST00000372633 TMEM131LA2VDJ0 1609 aa16.94■□□□□ 0.3
RAB40A-202ENST00000372633 DLG5Q8TDM6 1919 aa16.94■□□□□ 0.3
RAB40A-202ENST00000372633 PRAM1Q96QH2 718 aa16.94■□□□□ 0.3
RAB40A-202ENST00000372633 API5Q9BZZ5 524 aaKnown RBP16.94■□□□□ 0.3
RAB40A-202ENST00000372633 MBIPQ9NS73 344 aa16.94■□□□□ 0.3
RAB40A-202ENST00000372633 LMBRD1Q9NUN5 540 aa16.94■□□□□ 0.3
RAB40A-202ENST00000372633 TTC22Q5TAA0 569 aa16.94■□□□□ 0.3
RAB40A-202ENST00000372633 SLC52A1Q9NWF4 448 aa16.93■□□□□ 0.3
RAB40A-202ENST00000372633 CWC22Q9HCG8 908 aaKnown RBP16.93■□□□□ 0.3
RAB40A-202ENST00000372633 KIAA1211Q6ZU35 1233 aa16.92■□□□□ 0.3
RAB40A-202ENST00000372633 PDLIM2Q96JY6 352 aa16.92■□□□□ 0.3
RAB40A-202ENST00000372633 TWISTNBQ3B726 338 aaPredicted RBP16.92■□□□□ 0.3
RAB40A-202ENST00000372633 ZSCAN23Q3MJ62 389 aa16.92■□□□□ 0.3
RAB40A-202ENST00000372633 THUMPD2Q9BTF0 503 aaKnown RBP16.92■□□□□ 0.3
RAB40A-202ENST00000372633 PDCL3Q9H2J4 239 aa16.92■□□□□ 0.3
RAB40A-202ENST00000372633 ATP7BP35670 1465 aa16.91■□□□□ 0.3
RAB40A-202ENST00000372633 CDK19Q9BWU1 502 aa16.91■□□□□ 0.3
RAB40A-202ENST00000372633 CABP1Q9NZU7 370 aa16.91■□□□□ 0.3
RAB40A-202ENST00000372633 MCTP1Q6DN14 999 aa16.91■□□□□ 0.3
RAB40A-202ENST00000372633 VSIG10Q8N0Z9 540 aa16.91■□□□□ 0.3
RAB40A-202ENST00000372633 INTS3Q68E01 1043 aaKnown RBP16.9■□□□□ 0.3
RAB40A-202ENST00000372633 IL13P35225 146 aa16.9■□□□□ 0.3
RAB40A-202ENST00000372633 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.9■□□□□ 0.3
RAB40A-202ENST00000372633 C8orf58Q8NAV2 365 aa16.9■□□□□ 0.3
RAB40A-202ENST00000372633 ZMYND15Q9H091 742 aa16.9■□□□□ 0.3
RAB40A-202ENST00000372633 ATP10DQ9P241 1426 aa16.89■□□□□ 0.3
RAB40A-202ENST00000372633 MSNP26038 577 aaKnown RBP16.89■□□□□ 0.29
RAB40A-202ENST00000372633 CDK12Q9NYV4 1490 aaPredicted RBP16.89■□□□□ 0.29
RAB40A-202ENST00000372633 DIP2CQ9Y2E4 1556 aa16.89■□□□□ 0.29
RAB40A-202ENST00000372633 CAVIN1Q6NZI2 390 aaKnown RBP16.89■□□□□ 0.29
RAB40A-202ENST00000372633 NOL7Q9UMY1 257 aaKnown RBP16.89■□□□□ 0.29
RAB40A-202ENST00000372633 ALKQ9UM73 1620 aa16.89■□□□□ 0.29
RAB40A-202ENST00000372633 HMOX1P09601 288 aa16.88■□□□□ 0.29
RAB40A-202ENST00000372633 ANKRD44Q8N8A2 993 aa16.88■□□□□ 0.29
RAB40A-202ENST00000372633 PKNOX2Q96KN3 472 aa16.88■□□□□ 0.29
RAB40A-202ENST00000372633 PREX1Q8TCU6 1659 aa16.88■□□□□ 0.29
RAB40A-202ENST00000372633 ZNF500O60304 480 aaPredicted RBP16.88■□□□□ 0.29
RAB40A-202ENST00000372633 CPSF1Q10570 1443 aaKnown RBP16.88■□□□□ 0.29
RAB40A-202ENST00000372633 ELL2O00472 640 aaPredicted RBP16.87■□□□□ 0.29
RAB40A-202ENST00000372633 LMOD3Q0VAK6 560 aa16.87■□□□□ 0.29
RAB40A-202ENST00000372633 PKP1Q13835 747 aa16.87■□□□□ 0.29
RAB40A-202ENST00000372633 RBSNQ9H1K0 784 aa16.87■□□□□ 0.29
RAB40A-202ENST00000372633 RIMS2Q9UQ26 1411 aa16.87■□□□□ 0.29
RAB40A-202ENST00000372633 FBLN1P23142 703 aa16.86■□□□□ 0.29
RAB40A-202ENST00000372633 RPAP2Q8IXW5 612 aaPredicted RBP16.86■□□□□ 0.29
RAB40A-202ENST00000372633 C16orf71Q8IYS4 520 aaPredicted RBP16.86■□□□□ 0.29
RAB40A-202ENST00000372633 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.86■□□□□ 0.29
RAB40A-202ENST00000372633 ZDHHC9Q9Y397 364 aa16.86■□□□□ 0.29
RAB40A-202ENST00000372633 RGS12O14924 1447 aa16.86■□□□□ 0.29
RAB40A-202ENST00000372633 ST18O60284 1047 aa16.85■□□□□ 0.29
RAB40A-202ENST00000372633 AATKQ6ZMQ8 1374 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms