RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 NBR1Q14596 966 aa22.97■■□□□ 1.27
CD40-201ENST00000372276 NME9Q86XW9 330 aa22.97■■□□□ 1.27
CD40-201ENST00000372276 UPF2Q9HAU5 1272 aaKnown RBP22.97■■□□□ 1.27
CD40-201ENST00000372276 SETD1BQ9UPS6 1966 aaKnown RBP22.95■■□□□ 1.26
CD40-201ENST00000372276 NOB1Q9ULX3 412 aaKnown RBP22.95■■□□□ 1.26
CD40-201ENST00000372276 PDZRN3Q9UPQ7 1066 aa22.95■■□□□ 1.26
CD40-201ENST00000372276 TOPAZ1Q8N9V7 1692 aa22.93■■□□□ 1.26
CD40-201ENST00000372276 SLIT1O75093 1534 aa22.93■■□□□ 1.26
CD40-201ENST00000372276 ITPRIPQ8IWB1 547 aa22.93■■□□□ 1.26
CD40-201ENST00000372276 EMILIN1Q9Y6C2 1016 aa22.93■■□□□ 1.26
CD40-201ENST00000372276 ROBO2Q9HCK4 1378 aa22.93■■□□□ 1.26
CD40-201ENST00000372276 LMTK3Q96Q04 1460 aa22.92■■□□□ 1.26
CD40-201ENST00000372276 ZNF853P0CG23 659 aa22.92■■□□□ 1.26
CD40-201ENST00000372276 DIP2AQ14689 1571 aa22.92■■□□□ 1.26
CD40-201ENST00000372276 NRKQ7Z2Y5 1582 aa22.92■■□□□ 1.26
CD40-201ENST00000372276 BECN1Q14457 450 aa22.91■■□□□ 1.26
CD40-201ENST00000372276 TNNQ9UQP3 1299 aa22.91■■□□□ 1.26
CD40-201ENST00000372276 TBX22Q9Y458 520 aa22.91■■□□□ 1.26
CD40-201ENST00000372276 TTC21BQ7Z4L5 1316 aa22.9■■□□□ 1.26
CD40-201ENST00000372276 ARHGAP23Q9P227 1491 aa22.9■■□□□ 1.26
CD40-201ENST00000372276 CFAP44Q96MT7 982 aa22.9■■□□□ 1.26
CD40-201ENST00000372276 ZBTB40Q9NUA8 1239 aa22.9■■□□□ 1.26
CD40-201ENST00000372276 TTC21AQ8NDW8 1320 aa22.89■■□□□ 1.26
CD40-201ENST00000372276 PRR36Q9H6K5 1346 aa22.88■■□□□ 1.25
CD40-201ENST00000372276 PIK3R4Q99570 1358 aa22.88■■□□□ 1.25
CD40-201ENST00000372276 DEKP35659 375 aaKnown RBP22.88■■□□□ 1.25
CD40-201ENST00000372276 SMC5Q8IY18 1101 aa22.88■■□□□ 1.25
CD40-201ENST00000372276 PHACTR3Q96KR7 559 aa22.88■■□□□ 1.25
CD40-201ENST00000372276 PTCH1Q13635 1447 aa22.88■■□□□ 1.25
CD40-201ENST00000372276 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.87■■□□□ 1.25
CD40-201ENST00000372276 VAMP4O75379 141 aa22.87■■□□□ 1.25
CD40-201ENST00000372276 HMOX1P09601 288 aa22.87■■□□□ 1.25
CD40-201ENST00000372276 TMEM57Q8N5G2 664 aa22.86■■□□□ 1.25
CD40-201ENST00000372276 KIF24Q5T7B8 1368 aa22.86■■□□□ 1.25
CD40-201ENST00000372276 USP31Q70CQ4 1352 aa22.86■■□□□ 1.25
CD40-201ENST00000372276 OVOS2A0A0J9YW53 1432 aa22.86■■□□□ 1.25
CD40-201ENST00000372276 USP6P35125 1406 aa22.86■■□□□ 1.25
CD40-201ENST00000372276 OVOS2Q6IE36 1432 aa22.86■■□□□ 1.25
CD40-201ENST00000372276 THEMISQ8N1K5 641 aaPredicted RBP22.86■■□□□ 1.25
CD40-201ENST00000372276 ACEP12821 1306 aa22.85■■□□□ 1.25
CD40-201ENST00000372276 NALCNQ8IZF0 1738 aa22.84■■□□□ 1.25
CD40-201ENST00000372276 LTKP29376 864 aa22.84■■□□□ 1.25
CD40-201ENST00000372276 MRPL50Q8N5N7 158 aaKnown RBP22.84■■□□□ 1.25
CD40-201ENST00000372276 API5Q9BZZ5 524 aaKnown RBP22.84■■□□□ 1.25
CD40-201ENST00000372276 LAS1LQ9Y4W2 734 aaKnown RBP22.83■■□□□ 1.25
CD40-201ENST00000372276 DLG5Q8TDM6 1919 aa22.82■■□□□ 1.24
CD40-201ENST00000372276 ZRANB1Q9UGI0 708 aa22.82■■□□□ 1.24
CD40-201ENST00000372276 USP19O94966 1318 aa22.82■■□□□ 1.24
CD40-201ENST00000372276 FBLN1P23142 703 aa22.81■■□□□ 1.24
CD40-201ENST00000372276 ZNF142P52746 1687 aaPredicted RBP22.81■■□□□ 1.24
CD40-201ENST00000372276 RRS1Q15050 365 aaKnown RBP22.81■■□□□ 1.24
CD40-201ENST00000372276 GCC1Q96CN9 775 aa22.81■■□□□ 1.24
CD40-201ENST00000372276 MBIPQ9NS73 344 aa22.81■■□□□ 1.24
CD40-201ENST00000372276 CEP170BQ9Y4F5 1589 aaPredicted RBP22.8■■□□□ 1.24
CD40-201ENST00000372276 SSH2Q76I76 1423 aa22.8■■□□□ 1.24
CD40-201ENST00000372276 EIF5BO60841 1220 aaKnown RBP22.8■■□□□ 1.24
CD40-201ENST00000372276 TWISTNBQ3B726 338 aaPredicted RBP22.8■■□□□ 1.24
CD40-201ENST00000372276 HSPA2P54652 639 aa22.79■■□□□ 1.24
CD40-201ENST00000372276 EIF4A2Q14240 407 aaKnown RBP22.79■■□□□ 1.24
CD40-201ENST00000372276 TBC1D32Q96NH3 1257 aa22.79■■□□□ 1.24
CD40-201ENST00000372276 AMOTL2Q9Y2J4 779 aa22.79■■□□□ 1.24
CD40-201ENST00000372276 ANKARQ7Z5J8 1434 aa22.78■■□□□ 1.24
CD40-201ENST00000372276 NCKAP5LQ9HCH0 1330 aa22.78■■□□□ 1.24
CD40-201ENST00000372276 PTPRUQ92729 1446 aa22.77■■□□□ 1.24
CD40-201ENST00000372276 ARHGEF10O15013 1369 aa22.77■■□□□ 1.24
CD40-201ENST00000372276 KIAA0232Q92628 1395 aa22.77■■□□□ 1.24
CD40-201ENST00000372276 ABCC4O15439 1325 aa22.77■■□□□ 1.24
CD40-201ENST00000372276 NUCB1Q02818 461 aa22.77■■□□□ 1.24
CD40-201ENST00000372276 ZBTB7BO15156 539 aaPredicted RBP22.76■■□□□ 1.23
CD40-201ENST00000372276 RGPD1P0DJD0 1748 aa22.75■■□□□ 1.23
CD40-201ENST00000372276 SULT6B1Q6IMI4 303 aa22.74■■□□□ 1.23
CD40-201ENST00000372276 SBNO1A3KN83 1393 aa22.74■■□□□ 1.23
CD40-201ENST00000372276 CHL1O00533 1208 aa22.72■■□□□ 1.23
CD40-201ENST00000372276 SLC26A8Q96RN1 970 aa22.72■■□□□ 1.23
CD40-201ENST00000372276 FLT4P35916 1363 aa22.72■■□□□ 1.23
CD40-201ENST00000372276 SEC24BO95487 1268 aa22.71■■□□□ 1.23
CD40-201ENST00000372276 NFKBIBQ15653 356 aa22.71■■□□□ 1.23
CD40-201ENST00000372276 THUMPD2Q9BTF0 503 aaKnown RBP22.71■■□□□ 1.23
CD40-201ENST00000372276 CHD1LQ86WJ1 897 aa22.71■■□□□ 1.23
CD40-201ENST00000372276 TSPYL6Q8N831 410 aa22.71■■□□□ 1.23
CD40-201ENST00000372276 XRN1Q8IZH2 1706 aaKnown RBP22.7■■□□□ 1.23
CD40-201ENST00000372276 HTATSF1O43719 755 aaKnown RBP22.7■■□□□ 1.22
CD40-201ENST00000372276 NGDNQ8NEJ9 315 aaKnown RBP22.69■■□□□ 1.22
CD40-201ENST00000372276 PTPRCP08575 1304 aa22.69■■□□□ 1.22
CD40-201ENST00000372276 SLC4A3P48751 1232 aa22.68■■□□□ 1.22
CD40-201ENST00000372276 C8orf58Q8NAV2 365 aa22.68■■□□□ 1.22
CD40-201ENST00000372276 FMN2Q9NZ56 1722 aa22.68■■□□□ 1.22
CD40-201ENST00000372276 PEAK1Q9H792 1746 aa22.67■■□□□ 1.22
CD40-201ENST00000372276 BMP2KLQ5H9B9 411 aa22.67■■□□□ 1.22
CD40-201ENST00000372276 INTS3Q68E01 1043 aaKnown RBP22.67■■□□□ 1.22
CD40-201ENST00000372276 GAS2L2Q8NHY3 880 aa22.67■■□□□ 1.22
CD40-201ENST00000372276 USP54Q70EL1 1684 aa22.67■■□□□ 1.22
CD40-201ENST00000372276 KDRP35968 1356 aa22.66■■□□□ 1.22
CD40-201ENST00000372276 C22orf23Q9BZE7 217 aa22.65■■□□□ 1.22
CD40-201ENST00000372276 SOS1Q07889 1333 aaPredicted RBP22.65■■□□□ 1.22
CD40-201ENST00000372276 HSP90AB2PQ58FF8 381 aa22.64■■□□□ 1.22
CD40-201ENST00000372276 RTF1Q92541 710 aaKnown RBP22.64■■□□□ 1.22
CD40-201ENST00000372276 MAP3K19Q56UN5 1328 aa22.64■■□□□ 1.22
CD40-201ENST00000372276 STRCQ7RTU9 1775 aa22.63■■□□□ 1.21
CD40-201ENST00000372276 FAM83GA6ND36 823 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms