RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 C22orf23Q9BZE7 217 aa15.99■□□□□ 0.15
RAPGEF1-201ENST00000372189 LNPKQ9C0E8 428 aa15.99■□□□□ 0.15
RAPGEF1-201ENST00000372189 MYL6BP14649 208 aa15.98■□□□□ 0.15
RAPGEF1-201ENST00000372189 THOC2Q8NI27 1593 aaKnown RBP15.98■□□□□ 0.15
RAPGEF1-201ENST00000372189 CLASRPQ8N2M8 674 aaKnown RBP15.98■□□□□ 0.15
RAPGEF1-201ENST00000372189 SURF6O75683 361 aaKnown RBP15.98■□□□□ 0.15
RAPGEF1-201ENST00000372189 NCOA1Q15788 1441 aa15.98■□□□□ 0.15
RAPGEF1-201ENST00000372189 ADAMTS2O95450 1211 aa15.98■□□□□ 0.15
RAPGEF1-201ENST00000372189 PLCH2O75038 1416 aa15.98■□□□□ 0.15
RAPGEF1-201ENST00000372189 WASLO00401 505 aaPredicted RBP15.97■□□□□ 0.15
RAPGEF1-201ENST00000372189 WDR7Q9Y4E6 1490 aa15.97■□□□□ 0.15
RAPGEF1-201ENST00000372189 ERC1Q8IUD2 1116 aa15.97■□□□□ 0.15
RAPGEF1-201ENST00000372189 TSR2Q969E8 191 aaKnown RBP15.97■□□□□ 0.15
RAPGEF1-201ENST00000372189 FCHSD2O94868 740 aa15.97■□□□□ 0.15
RAPGEF1-201ENST00000372189 ADGRF5Q8IZF2 1346 aa15.97■□□□□ 0.15
RAPGEF1-201ENST00000372189 GNL3LQ9NVN8 582 aaKnown RBP15.97■□□□□ 0.15
RAPGEF1-201ENST00000372189 RALYLQ86SE5 291 aaKnown RBP15.96■□□□□ 0.15
RAPGEF1-201ENST00000372189 CCDC39Q9UFE4 941 aa15.96■□□□□ 0.15
RAPGEF1-201ENST00000372189 GNAI2P04899 355 aa15.96■□□□□ 0.15
RAPGEF1-201ENST00000372189 CNTROBQ8N137 903 aa15.96■□□□□ 0.15
RAPGEF1-201ENST00000372189 GNAT3A8MTJ3 354 aa15.96■□□□□ 0.15
RAPGEF1-201ENST00000372189 FOXO3O43524 673 aa15.96■□□□□ 0.15
RAPGEF1-201ENST00000372189 SAMD1Q6SPF0 538 aaPredicted RBP15.96■□□□□ 0.15
RAPGEF1-201ENST00000372189 ATP10BO94823 1461 aa15.96■□□□□ 0.15
RAPGEF1-201ENST00000372189 TPM2P07951 284 aa15.95■□□□□ 0.14
RAPGEF1-201ENST00000372189 NOS1P29475 1434 aa15.95■□□□□ 0.14
RAPGEF1-201ENST00000372189 FSD1Q9BTV5 496 aa15.95■□□□□ 0.14
RAPGEF1-201ENST00000372189 KDM5BQ9UGL1 1544 aa15.95■□□□□ 0.14
RAPGEF1-201ENST00000372189 CCT4P50991 539 aaKnown RBP15.95■□□□□ 0.14
RAPGEF1-201ENST00000372189 IRX3P78415 501 aaPredicted RBP15.95■□□□□ 0.14
RAPGEF1-201ENST00000372189 WDR63Q8IWG1 891 aa15.95■□□□□ 0.14
RAPGEF1-201ENST00000372189 NOB1Q9ULX3 412 aaKnown RBP15.95■□□□□ 0.14
RAPGEF1-201ENST00000372189 PES1O00541 588 aaKnown RBP15.95■□□□□ 0.14
RAPGEF1-201ENST00000372189 TTC39AQ5SRH9 613 aa15.94■□□□□ 0.14
RAPGEF1-201ENST00000372189 CEP89Q96ST8 783 aa15.94■□□□□ 0.14
RAPGEF1-201ENST00000372189 DNAJC2Q99543 621 aaKnown RBP15.94■□□□□ 0.14
RAPGEF1-201ENST00000372189 PLCD4Q9BRC7 762 aa15.94■□□□□ 0.14
RAPGEF1-201ENST00000372189 GPATCH8Q9UKJ3 1502 aaKnown RBP15.94■□□□□ 0.14
RAPGEF1-201ENST00000372189 NASPP49321 788 aaPredicted RBP15.94■□□□□ 0.14
RAPGEF1-201ENST00000372189 CCDC158Q5M9N0 1113 aa15.94■□□□□ 0.14
RAPGEF1-201ENST00000372189 CDCA7LQ96GN5 454 aa15.94■□□□□ 0.14
RAPGEF1-201ENST00000372189 NGLY1Q96IV0 654 aa15.94■□□□□ 0.14
RAPGEF1-201ENST00000372189 PAIP2Q9BPZ3 127 aaKnown RBP15.94■□□□□ 0.14
RAPGEF1-201ENST00000372189 STARD3NLO95772 234 aa15.93■□□□□ 0.14
RAPGEF1-201ENST00000372189 SRCIN1Q9C0H9 1055 aa15.93■□□□□ 0.14
RAPGEF1-201ENST00000372189 TMOD3Q9NYL9 352 aa15.93■□□□□ 0.14
RAPGEF1-201ENST00000372189 KRT28Q7Z3Y7 464 aa15.93■□□□□ 0.14
RAPGEF1-201ENST00000372189 BBXQ8WY36 941 aaPredicted RBP15.93■□□□□ 0.14
RAPGEF1-201ENST00000372189 HOMER1Q86YM7 354 aa15.92■□□□□ 0.14
RAPGEF1-201ENST00000372189 BICD2Q8TD16 824 aa15.92■□□□□ 0.14
RAPGEF1-201ENST00000372189 ZNF518AQ6AHZ1 1483 aa15.92■□□□□ 0.14
RAPGEF1-201ENST00000372189 NME9Q86XW9 330 aa15.92■□□□□ 0.14
RAPGEF1-201ENST00000372189 ADAMTS12P58397 1594 aa15.92■□□□□ 0.14
RAPGEF1-201ENST00000372189 NFE2L2Q16236 605 aa15.91■□□□□ 0.14
RAPGEF1-201ENST00000372189 SASS6Q6UVJ0 657 aa15.91■□□□□ 0.14
RAPGEF1-201ENST00000372189 DEF6Q9H4E7 631 aa15.91■□□□□ 0.14
RAPGEF1-201ENST00000372189 R3HCC1Q9Y3T6 440 aaKnown RBP15.91■□□□□ 0.14
RAPGEF1-201ENST00000372189 CT47B1P0C2W7 299 aaPredicted RBP15.91■□□□□ 0.14
RAPGEF1-201ENST00000372189 CADPS2Q86UW7 1296 aa15.91■□□□□ 0.14
RAPGEF1-201ENST00000372189 ARGLU1Q9NWB6 273 aaPredicted RBP15.91■□□□□ 0.14
RAPGEF1-201ENST00000372189 KIF21AQ7Z4S6 1674 aa15.91■□□□□ 0.14
RAPGEF1-201ENST00000372189 SMC3Q9UQE7 1217 aa15.91■□□□□ 0.14
RAPGEF1-201ENST00000372189 MPHOSPH8Q99549 860 aa15.91■□□□□ 0.14
RAPGEF1-201ENST00000372189 TRAK2O60296 914 aa15.9■□□□□ 0.14
RAPGEF1-201ENST00000372189 CDC45O75419 566 aa15.9■□□□□ 0.14
RAPGEF1-201ENST00000372189 SLC3A2P08195 630 aaKnown RBP15.9■□□□□ 0.14
RAPGEF1-201ENST00000372189 CCDC57Q2TAC2 916 aa15.9■□□□□ 0.14
RAPGEF1-201ENST00000372189 AMOTQ4VCS5 1084 aa15.9■□□□□ 0.14
RAPGEF1-201ENST00000372189 MSH6P52701 1360 aa15.9■□□□□ 0.14
RAPGEF1-201ENST00000372189 A2MP01023 1474 aa15.9■□□□□ 0.14
RAPGEF1-201ENST00000372189 ITSN2Q9NZM3 1697 aa15.9■□□□□ 0.14
RAPGEF1-201ENST00000372189 BICDL1Q6ZP65 573 aa15.9■□□□□ 0.14
RAPGEF1-201ENST00000372189 CLGNO14967 610 aa15.89■□□□□ 0.13
RAPGEF1-201ENST00000372189 HOOK1Q9UJC3 728 aaKnown RBP15.89■□□□□ 0.13
RAPGEF1-201ENST00000372189 HIP1O00291 1037 aa15.89■□□□□ 0.13
RAPGEF1-201ENST00000372189 C14orf93Q9H972 538 aaKnown RBP15.89■□□□□ 0.13
RAPGEF1-201ENST00000372189 IFT57Q9NWB7 429 aa15.89■□□□□ 0.13
RAPGEF1-201ENST00000372189 CCDC47Q96A33 483 aaKnown RBP15.89■□□□□ 0.13
RAPGEF1-201ENST00000372189 DUOX2Q9NRD8 1548 aa15.89■□□□□ 0.13
RAPGEF1-201ENST00000372189 SAFBQ15424 915 aaKnown RBP eCLIP15.89■□□□□ 0.13
RAPGEF1-201ENST00000372189 C1orf115Q9H7X2 142 aa15.89■□□□□ 0.13
RAPGEF1-201ENST00000372189 CTTNBP2Q8WZ74 1663 aa15.88■□□□□ 0.13
RAPGEF1-201ENST00000372189 IKQ13123 557 aaPredicted RBP15.88■□□□□ 0.13
RAPGEF1-201ENST00000372189 IPO7O95373 1038 aaKnown RBP15.88■□□□□ 0.13
RAPGEF1-201ENST00000372189 ANKRD20A12PQ8NF67 263 aa15.88■□□□□ 0.13
RAPGEF1-201ENST00000372189 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.88■□□□□ 0.13
RAPGEF1-201ENST00000372189 CCDC43Q96MW1 224 aaKnown RBP15.88■□□□□ 0.13
RAPGEF1-201ENST00000372189 PSMA5P28066 241 aa15.88■□□□□ 0.13
RAPGEF1-201ENST00000372189 SART3Q15020 963 aaKnown RBP15.88■□□□□ 0.13
RAPGEF1-201ENST00000372189 USHBP1Q8N6Y0 703 aa15.88■□□□□ 0.13
RAPGEF1-201ENST00000372189 ZNF428Q96B54 188 aa15.88■□□□□ 0.13
RAPGEF1-201ENST00000372189 MAPK8IP2Q13387 824 aaPredicted RBP15.87■□□□□ 0.13
RAPGEF1-201ENST00000372189 UHRF1BP1LA0JNW5 1464 aa15.87■□□□□ 0.13
RAPGEF1-201ENST00000372189 TSPYL1Q9H0U9 437 aa15.87■□□□□ 0.13
RAPGEF1-201ENST00000372189 SIL1Q9H173 461 aa15.87■□□□□ 0.13
RAPGEF1-201ENST00000372189 VPS37CA5D8V6 355 aaPredicted RBP15.87■□□□□ 0.13
RAPGEF1-201ENST00000372189 BRPF3Q9ULD4 1205 aa15.87■□□□□ 0.13
RAPGEF1-201ENST00000372189 ZNF652Q9Y2D9 606 aa15.87■□□□□ 0.13
RAPGEF1-201ENST00000372189 EIF4G3O43432 1585 aaKnown RBP15.87■□□□□ 0.13
RAPGEF1-201ENST00000372189 WDR97A6NE52 1622 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms