RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 EMILIN1Q9Y6C2 1016 aa16.97■□□□□ 0.31
LDB3-203ENST00000372056 ALS2Q96Q42 1657 aa16.97■□□□□ 0.31
LDB3-203ENST00000372056 E9PSI1 815 aa16.97■□□□□ 0.31
LDB3-203ENST00000372056 WWC1Q8IX03 1113 aa16.97■□□□□ 0.31
LDB3-203ENST00000372056 MAP3K19Q56UN5 1328 aa16.96■□□□□ 0.31
LDB3-203ENST00000372056 GCP02774 474 aa16.96■□□□□ 0.31
LDB3-203ENST00000372056 RRS1Q15050 365 aaKnown RBP16.96■□□□□ 0.31
LDB3-203ENST00000372056 SPINK5Q9NQ38 1064 aaPredicted RBP16.96■□□□□ 0.31
LDB3-203ENST00000372056 PHRF1Q9P1Y6 1649 aaKnown RBP16.96■□□□□ 0.3
LDB3-203ENST00000372056 U2SURPO15042 1029 aaKnown RBP16.95■□□□□ 0.3
LDB3-203ENST00000372056 IL13P35225 146 aa16.95■□□□□ 0.3
LDB3-203ENST00000372056 MARF1Q9Y4F3 1742 aaKnown RBP16.94■□□□□ 0.3
LDB3-203ENST00000372056 CCDC27Q2M243 656 aa16.94■□□□□ 0.3
LDB3-203ENST00000372056 B4GALNT3Q6L9W6 998 aa16.94■□□□□ 0.3
LDB3-203ENST00000372056 LMOD2Q6P5Q4 547 aa16.94■□□□□ 0.3
LDB3-203ENST00000372056 IP6K1Q92551 441 aa16.94■□□□□ 0.3
LDB3-203ENST00000372056 ABCC6O95255 1503 aa16.94■□□□□ 0.3
LDB3-203ENST00000372056 NHSL1Q5SYE7 1610 aa16.93■□□□□ 0.3
LDB3-203ENST00000372056 MAPK8IP3Q9UPT6 1336 aa16.93■□□□□ 0.3
LDB3-203ENST00000372056 MED1Q15648 1581 aaPredicted RBP16.93■□□□□ 0.3
LDB3-203ENST00000372056 RRP7AQ9Y3A4 280 aaKnown RBP16.93■□□□□ 0.3
LDB3-203ENST00000372056 FBLN1P23142 703 aa16.93■□□□□ 0.3
LDB3-203ENST00000372056 LRRC59Q96AG4 307 aaKnown RBP16.93■□□□□ 0.3
LDB3-203ENST00000372056 PLEKHF1Q96S99 279 aa16.93■□□□□ 0.3
LDB3-203ENST00000372056 NFAT5O94916 1531 aa16.93■□□□□ 0.3
LDB3-203ENST00000372056 HOXC9P31274 260 aa16.91■□□□□ 0.3
LDB3-203ENST00000372056 NEUROD2Q15784 382 aa16.91■□□□□ 0.3
LDB3-203ENST00000372056 NUTM2GQ5VZR2 741 aa16.91■□□□□ 0.3
LDB3-203ENST00000372056 ARHGEF25Q86VW2 580 aa16.91■□□□□ 0.3
LDB3-203ENST00000372056 XPCQ01831 940 aaPredicted RBP16.9■□□□□ 0.3
LDB3-203ENST00000372056 TSHZ2Q9NRE2 1034 aa16.9■□□□□ 0.3
LDB3-203ENST00000372056 EIF4A2Q14240 407 aaKnown RBP16.9■□□□□ 0.3
LDB3-203ENST00000372056 WDR63Q8IWG1 891 aa16.9■□□□□ 0.3
LDB3-203ENST00000372056 AHDC1Q5TGY3 1603 aaPredicted RBP16.9■□□□□ 0.3
LDB3-203ENST00000372056 CPDO75976 1380 aa16.89■□□□□ 0.29
LDB3-203ENST00000372056 PLIN1O60240 522 aa16.88■□□□□ 0.29
LDB3-203ENST00000372056 HSP90AB2PQ58FF8 381 aa16.88■□□□□ 0.29
LDB3-203ENST00000372056 LMOD3Q0VAK6 560 aa16.88■□□□□ 0.29
LDB3-203ENST00000372056 EXOC6Q8TAG9 804 aa16.88■□□□□ 0.29
LDB3-203ENST00000372056 LTN1O94822 1766 aa16.88■□□□□ 0.29
LDB3-203ENST00000372056 SOX12O15370 315 aa16.87■□□□□ 0.29
LDB3-203ENST00000372056 RSPH6AQ9H0K4 717 aa16.87■□□□□ 0.29
LDB3-203ENST00000372056 CALD1Q05682 793 aaKnown RBP16.86■□□□□ 0.29
LDB3-203ENST00000372056 CCDC136Q96JN2 1154 aa16.86■□□□□ 0.29
LDB3-203ENST00000372056 PEAK1Q9H792 1746 aa16.86■□□□□ 0.29
LDB3-203ENST00000372056 PLEKHG2Q9H7P9 1386 aa16.86■□□□□ 0.29
LDB3-203ENST00000372056 ROBO1Q9Y6N7 1651 aa16.86■□□□□ 0.29
LDB3-203ENST00000372056 TMPOP42166 694 aaKnown RBP16.86■□□□□ 0.29
LDB3-203ENST00000372056 IGSF1Q8N6C5 1336 aa16.85■□□□□ 0.29
LDB3-203ENST00000372056 KDRP35968 1356 aa16.85■□□□□ 0.29
LDB3-203ENST00000372056 RGPD1P0DJD0 1748 aa16.84■□□□□ 0.29
LDB3-203ENST00000372056 PRKAR2BP31323 418 aa16.84■□□□□ 0.29
LDB3-203ENST00000372056 HAP1P54257 671 aaPredicted RBP16.83■□□□□ 0.28
LDB3-203ENST00000372056 DDX17Q92841 729 aaKnown RBP16.83■□□□□ 0.28
LDB3-203ENST00000372056 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.82■□□□□ 0.28
LDB3-203ENST00000372056 TRIM35Q9UPQ4 493 aa16.82■□□□□ 0.28
LDB3-203ENST00000372056 IL16Q14005 1332 aa16.82■□□□□ 0.28
LDB3-203ENST00000372056 C20orf194Q5TEA3 1177 aa16.82■□□□□ 0.28
LDB3-203ENST00000372056 SULT6B1Q6IMI4 303 aa16.82■□□□□ 0.28
LDB3-203ENST00000372056 MYH16Q9H6N6 1097 aa16.82■□□□□ 0.28
LDB3-203ENST00000372056 CRYBG1Q9Y4K1 1723 aa16.81■□□□□ 0.28
LDB3-203ENST00000372056 NFE2L2Q16236 605 aa16.81■□□□□ 0.28
LDB3-203ENST00000372056 CERKQ8TCT0 537 aa16.81■□□□□ 0.28
LDB3-203ENST00000372056 CRBNQ96SW2 442 aa16.81■□□□□ 0.28
LDB3-203ENST00000372056 EYA1Q99502 592 aa16.8■□□□□ 0.28
LDB3-203ENST00000372056 UBAP1LF5GYI3 381 aa16.8■□□□□ 0.28
LDB3-203ENST00000372056 HMOX1P09601 288 aa16.8■□□□□ 0.28
LDB3-203ENST00000372056 FAM208AQ9UK61 1670 aaKnown RBP16.79■□□□□ 0.28
LDB3-203ENST00000372056 HTATSF1O43719 755 aaKnown RBP16.79■□□□□ 0.28
LDB3-203ENST00000372056 RIPK4P57078 832 aa16.79■□□□□ 0.28
LDB3-203ENST00000372056 GAS2L2Q8NHY3 880 aa16.79■□□□□ 0.28
LDB3-203ENST00000372056 COL22A1Q8NFW1 1626 aaPredicted RBP16.79■□□□□ 0.28
LDB3-203ENST00000372056 BCAR3O75815 825 aa16.78■□□□□ 0.28
LDB3-203ENST00000372056 ZC3H6P61129 1189 aaKnown RBP16.78■□□□□ 0.28
LDB3-203ENST00000372056 ANKRD24Q8TF21 1146 aa16.78■□□□□ 0.28
LDB3-203ENST00000372056 ERBB3P21860 1342 aa16.76■□□□□ 0.27
LDB3-203ENST00000372056 PHLPP1O60346 1717 aa16.76■□□□□ 0.27
LDB3-203ENST00000372056 NCAPD2Q15021 1401 aa16.76■□□□□ 0.27
LDB3-203ENST00000372056 AMOTQ4VCS5 1084 aa16.76■□□□□ 0.27
LDB3-203ENST00000372056 PHACTR3Q96KR7 559 aa16.76■□□□□ 0.27
LDB3-203ENST00000372056 PRDM11Q9NQV5 511 aa16.76■□□□□ 0.27
LDB3-203ENST00000372056 FANCIQ9NVI1 1328 aa16.76■□□□□ 0.27
LDB3-203ENST00000372056 RARSP54136 660 aaKnown RBP16.76■□□□□ 0.27
LDB3-203ENST00000372056 KIAA0232Q92628 1395 aa16.75■□□□□ 0.27
LDB3-203ENST00000372056 ZBTB7CA1YPR0 619 aa16.75■□□□□ 0.27
LDB3-203ENST00000372056 CT47B1P0C2W7 299 aaPredicted RBP16.75■□□□□ 0.27
LDB3-203ENST00000372056 COL18A1P39060 1754 aa16.74■□□□□ 0.27
LDB3-203ENST00000372056 CABLES1Q8TDN4 633 aa16.73■□□□□ 0.27
LDB3-203ENST00000372056 LTV1Q96GA3 475 aaPredicted RBP16.73■□□□□ 0.27
LDB3-203ENST00000372056 CAMTA1Q9Y6Y1 1673 aa16.73■□□□□ 0.27
LDB3-203ENST00000372056 PLEKHO1Q53GL0 409 aaPredicted RBP16.73■□□□□ 0.27
LDB3-203ENST00000372056 TSR2Q969E8 191 aaKnown RBP16.73■□□□□ 0.27
LDB3-203ENST00000372056 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.73■□□□□ 0.27
LDB3-203ENST00000372056 ABCA3Q99758 1704 aa16.73■□□□□ 0.27
LDB3-203ENST00000372056 COL16A1Q07092 1604 aaPredicted RBP16.73■□□□□ 0.27
LDB3-203ENST00000372056 RTF1Q92541 710 aaKnown RBP16.72■□□□□ 0.27
LDB3-203ENST00000372056 PIP4K2BP78356 416 aa16.71■□□□□ 0.27
LDB3-203ENST00000372056 PDE3AQ14432 1141 aa16.71■□□□□ 0.27
LDB3-203ENST00000372056 NBPF6Q5VWK0 638 aa16.71■□□□□ 0.27
LDB3-203ENST00000372056 NBPF4Q96M43 638 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms