RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 PPP6R1Q9UPN7 881 aa11.14□□□□□ -0.63
SMARCA1-202ENST00000371122 PZPP20742 1482 aa11.14□□□□□ -0.63
SMARCA1-202ENST00000371122 TTC5Q8N0Z6 440 aa11.14□□□□□ -0.63
SMARCA1-202ENST00000371122 STK11IPQ8N1F8 1099 aa11.14□□□□□ -0.63
SMARCA1-202ENST00000371122 EXOC6BQ9Y2D4 811 aa11.14□□□□□ -0.63
SMARCA1-202ENST00000371122 PREX1Q8TCU6 1659 aa11.14□□□□□ -0.63
SMARCA1-202ENST00000371122 APPP05067 770 aa11.14□□□□□ -0.63
SMARCA1-202ENST00000371122 IDI1Q13907 227 aa11.14□□□□□ -0.63
SMARCA1-202ENST00000371122 SF3A1Q15459 793 aaKnown RBP11.14□□□□□ -0.63
SMARCA1-202ENST00000371122 FAM83GA6ND36 823 aa11.14□□□□□ -0.63
SMARCA1-202ENST00000371122 F6X3S4 739 aa11.14□□□□□ -0.63
SMARCA1-202ENST00000371122 TMPOP42166 694 aaKnown RBP11.14□□□□□ -0.63
SMARCA1-202ENST00000371122 PDE4CQ08493 712 aa11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 CHAF1AQ13111 956 aaPredicted RBP11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 CHMP4CQ96CF2 233 aa11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 CCDC85AQ96PX6 553 aaPredicted RBP11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 DISP3Q9P2K9 1392 aa11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 RPRD2Q5VT52 1461 aaKnown RBP11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 UBTFL1P0CB47 393 aaPredicted RBP11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 LARP6Q9BRS8 491 aaKnown RBP11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 SMG6Q86US8 1419 aaKnown RBP11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 NSD3Q9BZ95 1437 aa11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 DDX11L8A8MPP1 907 aa11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 H3BQV1 296 aa11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 TRAK2O60296 914 aa11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 REC8O95072 547 aa11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 IGHDP01880 384 aa11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 NCBP3Q53F19 620 aaKnown RBP11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 IFFO2Q5TF58 517 aa11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 RIC3Q7Z5B4 369 aa11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 NEXNQ0ZGT2 675 aa11.12□□□□□ -0.63
SMARCA1-202ENST00000371122 CAVIN1Q6NZI2 390 aaKnown RBP11.12□□□□□ -0.63
SMARCA1-202ENST00000371122 ZC3H6P61129 1189 aaKnown RBP11.12□□□□□ -0.63
SMARCA1-202ENST00000371122 PDE3AQ14432 1141 aa11.12□□□□□ -0.63
SMARCA1-202ENST00000371122 MVPQ14764 893 aaKnown RBP11.12□□□□□ -0.63
SMARCA1-202ENST00000371122 DUSP27Q5VZP5 1158 aa11.12□□□□□ -0.63
SMARCA1-202ENST00000371122 FAM184AQ8NB25 1140 aa11.12□□□□□ -0.63
SMARCA1-202ENST00000371122 RIMS1Q86UR5 1692 aaKnown RBP11.12□□□□□ -0.63
SMARCA1-202ENST00000371122 PRPF40AO75400 957 aaKnown RBP11.11□□□□□ -0.63
SMARCA1-202ENST00000371122 G3BP1Q13283 466 aaKnown RBP eCLIP11.11□□□□□ -0.632e-8■■□□□ 12.5
SMARCA1-202ENST00000371122 TSHZ3Q63HK5 1081 aa11.11□□□□□ -0.63
SMARCA1-202ENST00000371122 SPHKAPQ2M3C7 1700 aa11.11□□□□□ -0.63
SMARCA1-202ENST00000371122 CLSTN1O94985 981 aa11.11□□□□□ -0.63
SMARCA1-202ENST00000371122 MYL6BP14649 208 aa11.11□□□□□ -0.63
SMARCA1-202ENST00000371122 RAPGEF4Q8WZA2 1011 aa11.11□□□□□ -0.63
SMARCA1-202ENST00000371122 MTMR7Q9Y216 660 aa11.11□□□□□ -0.63
SMARCA1-202ENST00000371122 RARSP54136 660 aaKnown RBP11.1□□□□□ -0.63
SMARCA1-202ENST00000371122 HDGFL1Q5TGJ6 251 aa11.1□□□□□ -0.63
SMARCA1-202ENST00000371122 SYAP1Q96A49 352 aaPredicted RBP11.1□□□□□ -0.63
SMARCA1-202ENST00000371122 CEBPZQ03701 1054 aaKnown RBP11.1□□□□□ -0.63
SMARCA1-202ENST00000371122 CFAP44Q96MT7 982 aa11.1□□□□□ -0.63
SMARCA1-202ENST00000371122 STRN4Q9NRL3 753 aa11.1□□□□□ -0.63
SMARCA1-202ENST00000371122 INTS3Q68E01 1043 aaKnown RBP11.1□□□□□ -0.63
SMARCA1-202ENST00000371122 SYNMO15061 1565 aa11.1□□□□□ -0.63
SMARCA1-202ENST00000371122 ZNF592Q92610 1267 aa11.09□□□□□ -0.63
SMARCA1-202ENST00000371122 PTPRTO14522 1441 aa11.09□□□□□ -0.63
SMARCA1-202ENST00000371122 UPF3BQ9BZI7 483 aaKnown RBP11.09□□□□□ -0.63
SMARCA1-202ENST00000371122 ZRANB1Q9UGI0 708 aa11.09□□□□□ -0.63
SMARCA1-202ENST00000371122 CDC45O75419 566 aa11.09□□□□□ -0.63
SMARCA1-202ENST00000371122 ANXA1P04083 346 aa11.09□□□□□ -0.63
SMARCA1-202ENST00000371122 FAM13BQ9NYF5 915 aa11.09□□□□□ -0.63
SMARCA1-202ENST00000371122 RASSF8Q8NHQ8 419 aa11.09□□□□□ -0.63
SMARCA1-202ENST00000371122 DNAJC2Q99543 621 aaKnown RBP11.09□□□□□ -0.63
SMARCA1-202ENST00000371122 PES1O00541 588 aaKnown RBP11.08□□□□□ -0.64
SMARCA1-202ENST00000371122 RAD21O60216 631 aa11.08□□□□□ -0.64
SMARCA1-202ENST00000371122 SPINK5Q9NQ38 1064 aaPredicted RBP11.08□□□□□ -0.64
SMARCA1-202ENST00000371122 NPATQ14207 1427 aa11.08□□□□□ -0.64
SMARCA1-202ENST00000371122 FIBPO43427 364 aa11.08□□□□□ -0.64
SMARCA1-202ENST00000371122 ZKSCAN1P17029 563 aaPredicted RBP11.08□□□□□ -0.64
SMARCA1-202ENST00000371122 ATP2B1P20020 1258 aa11.08□□□□□ -0.64
SMARCA1-202ENST00000371122 STK3Q13188 491 aa11.08□□□□□ -0.64
SMARCA1-202ENST00000371122 NUDT16Q96DE0 195 aaKnown RBP11.08□□□□□ -0.64
SMARCA1-202ENST00000371122 NOS1P29475 1434 aa11.08□□□□□ -0.64
SMARCA1-202ENST00000371122 NRDCO43847 1150 aa11.08□□□□□ -0.64
SMARCA1-202ENST00000371122 BICD2Q8TD16 824 aa11.08□□□□□ -0.64
SMARCA1-202ENST00000371122 GOLGA6L6A8MZA4 724 aa11.07□□□□□ -0.64
SMARCA1-202ENST00000371122 FYB1O15117 783 aa11.07□□□□□ -0.64
SMARCA1-202ENST00000371122 PPFIA3O75145 1194 aa11.07□□□□□ -0.64
SMARCA1-202ENST00000371122 TRPM2O94759 1503 aa11.07□□□□□ -0.64
SMARCA1-202ENST00000371122 NUTM1Q86Y26 1132 aa11.07□□□□□ -0.64
SMARCA1-202ENST00000371122 SMC3Q9UQE7 1217 aa11.07□□□□□ -0.64
SMARCA1-202ENST00000371122 MYO3AQ8NEV4 1616 aa11.07□□□□□ -0.64
SMARCA1-202ENST00000371122 NCKAP5LQ9HCH0 1330 aa11.07□□□□□ -0.64
SMARCA1-202ENST00000371122 CHD1LQ86WJ1 897 aa11.07□□□□□ -0.64
SMARCA1-202ENST00000371122 IFT172Q9UG01 1749 aa11.07□□□□□ -0.64
SMARCA1-202ENST00000371122 WASHC4Q2M389 1173 aa11.06□□□□□ -0.64
SMARCA1-202ENST00000371122 TRIM27P14373 513 aa11.06□□□□□ -0.64
SMARCA1-202ENST00000371122 ZNF530Q6P9A1 599 aaPredicted RBP11.06□□□□□ -0.64
SMARCA1-202ENST00000371122 JARID2Q92833 1246 aaPredicted RBP11.06□□□□□ -0.64
SMARCA1-202ENST00000371122 PCDHB15Q9Y5E8 787 aa11.06□□□□□ -0.64
SMARCA1-202ENST00000371122 PROSER2Q86WR7 435 aaPredicted RBP11.05□□□□□ -0.64
SMARCA1-202ENST00000371122 FSD1Q9BTV5 496 aa11.05□□□□□ -0.64
SMARCA1-202ENST00000371122 KRT24Q2M2I5 525 aa11.05□□□□□ -0.64
SMARCA1-202ENST00000371122 CLASRPQ8N2M8 674 aaKnown RBP11.05□□□□□ -0.64
SMARCA1-202ENST00000371122 BECN2A8MW95 431 aa11.05□□□□□ -0.64
SMARCA1-202ENST00000371122 FOXO3O43524 673 aa11.05□□□□□ -0.64
SMARCA1-202ENST00000371122 VSIG10Q8N0Z9 540 aa11.05□□□□□ -0.64
SMARCA1-202ENST00000371122 CCDC61Q9Y6R9 512 aa11.05□□□□□ -0.64
SMARCA1-202ENST00000371122 PTPRMP28827 1452 aa11.05□□□□□ -0.64
SMARCA1-202ENST00000371122 DTNBO60941 627 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms