RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 H0YHG0 523 aa20.35■□□□□ 0.85
PTP4A1-201ENST00000370651 SMARCE1Q969G3 411 aa20.35■□□□□ 0.85
PTP4A1-201ENST00000370651 SPATA32Q96LK8 384 aa20.35■□□□□ 0.85
PTP4A1-201ENST00000370651 DUSP27Q5VZP5 1158 aa20.35■□□□□ 0.85
PTP4A1-201ENST00000370651 VPS37DQ86XT2 251 aa20.35■□□□□ 0.85
PTP4A1-201ENST00000370651 FCHSD2O94868 740 aa20.35■□□□□ 0.85
PTP4A1-201ENST00000370651 JMYQ8N9B5 988 aa20.35■□□□□ 0.85
PTP4A1-201ENST00000370651 MAP4K4O95819 1239 aaPredicted RBP20.34■□□□□ 0.85
PTP4A1-201ENST00000370651 ATP2B1P20020 1258 aa20.34■□□□□ 0.85
PTP4A1-201ENST00000370651 HECW1Q76N89 1606 aa20.34■□□□□ 0.85
PTP4A1-201ENST00000370651 GRIN2BQ13224 1484 aa20.34■□□□□ 0.85
PTP4A1-201ENST00000370651 CABP1Q9NZU7 370 aa20.34■□□□□ 0.85
PTP4A1-201ENST00000370651 NUTM2GQ5VZR2 741 aa20.34■□□□□ 0.85
PTP4A1-201ENST00000370651 BLOC1S2Q6QNY1 142 aa20.34■□□□□ 0.85
PTP4A1-201ENST00000370651 SSH1Q8WYL5 1049 aa20.34■□□□□ 0.85
PTP4A1-201ENST00000370651 PDRG1Q9NUG6 133 aa20.34■□□□□ 0.85
PTP4A1-201ENST00000370651 SSFA2P28290 1259 aa20.33■□□□□ 0.85
PTP4A1-201ENST00000370651 KDM4AO75164 1064 aa20.33■□□□□ 0.85
PTP4A1-201ENST00000370651 JAKMIP1Q96N16 626 aaKnown RBP20.32■□□□□ 0.84
PTP4A1-201ENST00000370651 PPP6R1Q9UPN7 881 aa20.32■□□□□ 0.84
PTP4A1-201ENST00000370651 NSD3Q9BZ95 1437 aa20.32■□□□□ 0.84
PTP4A1-201ENST00000370651 FILIP1Q7Z7B0 1213 aa20.32■□□□□ 0.84
PTP4A1-201ENST00000370651 CEP57L1Q8IYX8 460 aa20.32■□□□□ 0.84
PTP4A1-201ENST00000370651 EVA1CP58658 441 aa20.31■□□□□ 0.84
PTP4A1-201ENST00000370651 XPCQ01831 940 aaPredicted RBP20.31■□□□□ 0.84
PTP4A1-201ENST00000370651 SART3Q15020 963 aaKnown RBP20.31■□□□□ 0.84
PTP4A1-201ENST00000370651 PDIA4P13667 645 aaKnown RBP20.31■□□□□ 0.84
PTP4A1-201ENST00000370651 MAP3K11Q16584 847 aa20.31■□□□□ 0.84
PTP4A1-201ENST00000370651 PDCL3Q9H2J4 239 aa20.31■□□□□ 0.84
PTP4A1-201ENST00000370651 CDK19Q9BWU1 502 aa20.31■□□□□ 0.84
PTP4A1-201ENST00000370651 CFAP45Q9UL16 551 aa20.31■□□□□ 0.84
PTP4A1-201ENST00000370651 OFD1O75665 1012 aa20.3■□□□□ 0.84
PTP4A1-201ENST00000370651 BRPF1P55201 1214 aaPredicted RBP20.3■□□□□ 0.84
PTP4A1-201ENST00000370651 NFE2L2Q16236 605 aa20.3■□□□□ 0.84
PTP4A1-201ENST00000370651 IL1RAPL2Q9NP60 686 aa20.3■□□□□ 0.84
PTP4A1-201ENST00000370651 CWC27Q6UX04 472 aaKnown RBP20.29■□□□□ 0.84
PTP4A1-201ENST00000370651 TBC1D32Q96NH3 1257 aa20.29■□□□□ 0.84
PTP4A1-201ENST00000370651 SRGAP3O43295 1099 aa20.29■□□□□ 0.84
PTP4A1-201ENST00000370651 AXDND1Q5T1B0 1012 aaPredicted RBP20.29■□□□□ 0.84
PTP4A1-201ENST00000370651 RAD21O60216 631 aa20.28■□□□□ 0.84
PTP4A1-201ENST00000370651 ALDH1L2Q3SY69 923 aa20.28■□□□□ 0.84
PTP4A1-201ENST00000370651 UPF3BQ9BZI7 483 aaKnown RBP20.28■□□□□ 0.84
PTP4A1-201ENST00000370651 TBC1D2BQ9UPU7 963 aa20.28■□□□□ 0.84
PTP4A1-201ENST00000370651 PIP4K2AP48426 406 aaPredicted RBP20.28■□□□□ 0.84
PTP4A1-201ENST00000370651 POLA1P09884 1462 aaPredicted RBP20.28■□□□□ 0.84
PTP4A1-201ENST00000370651 NLRP2Q9NX02 1062 aa20.27■□□□□ 0.84
PTP4A1-201ENST00000370651 EXOC6BQ9Y2D4 811 aa20.27■□□□□ 0.84
PTP4A1-201ENST00000370651 MAP3K1Q13233 1512 aa20.27■□□□□ 0.84
PTP4A1-201ENST00000370651 CCDC183Q5T5S1 534 aa20.27■□□□□ 0.84
PTP4A1-201ENST00000370651 CBFA2T2O43439 604 aa20.27■□□□□ 0.84
PTP4A1-201ENST00000370651 FAM177A1Q8N128 213 aaPredicted RBP20.27■□□□□ 0.84
PTP4A1-201ENST00000370651 PLEKHO1Q53GL0 409 aaPredicted RBP20.26■□□□□ 0.83
PTP4A1-201ENST00000370651 PPFIBP1Q86W92 1011 aa20.26■□□□□ 0.83
PTP4A1-201ENST00000370651 PCF11O94913 1555 aaKnown RBP20.26■□□□□ 0.83
PTP4A1-201ENST00000370651 ERLIN1O75477 346 aa20.26■□□□□ 0.83
PTP4A1-201ENST00000370651 DCTN1Q14203 1278 aa20.25■□□□□ 0.83
PTP4A1-201ENST00000370651 IGHDP01880 384 aa20.25■□□□□ 0.83
PTP4A1-201ENST00000370651 ZNF692Q9BU19 519 aaPredicted RBP20.25■□□□□ 0.83
PTP4A1-201ENST00000370651 SIL1Q9H173 461 aa20.25■□□□□ 0.83
PTP4A1-201ENST00000370651 DACH1Q9UI36 760 aa20.25■□□□□ 0.83
PTP4A1-201ENST00000370651 ATAD2Q6PL18 1390 aa20.25■□□□□ 0.83
PTP4A1-201ENST00000370651 ABCC11Q96J66 1382 aa20.25■□□□□ 0.83
PTP4A1-201ENST00000370651 CASTP20810 708 aaKnown RBP20.25■□□□□ 0.83
PTP4A1-201ENST00000370651 AACSQ86V21 672 aa20.25■□□□□ 0.83
PTP4A1-201ENST00000370651 EPRSP07814 1512 aaKnown RBP20.24■□□□□ 0.83
PTP4A1-201ENST00000370651 EIF3JO75822 258 aaKnown RBP20.24■□□□□ 0.83
PTP4A1-201ENST00000370651 RDXP35241 583 aaKnown RBP20.24■□□□□ 0.83
PTP4A1-201ENST00000370651 MAGEC2Q9UBF1 373 aaPredicted RBP20.24■□□□□ 0.83
PTP4A1-201ENST00000370651 GPRASP1Q5JY77 1395 aa20.24■□□□□ 0.83
PTP4A1-201ENST00000370651 MX1P20591 662 aa20.24■□□□□ 0.83
PTP4A1-201ENST00000370651 KRT32Q14532 448 aa20.24■□□□□ 0.83
PTP4A1-201ENST00000370651 FERMT3Q86UX7 667 aa20.24■□□□□ 0.83
PTP4A1-201ENST00000370651 ABTB2Q8N961 1025 aa20.23■□□□□ 0.83
PTP4A1-201ENST00000370651 UBXN4Q92575 508 aa20.23■□□□□ 0.83
PTP4A1-201ENST00000370651 EPS15P42566 896 aa20.23■□□□□ 0.83
PTP4A1-201ENST00000370651 CBX1P83916 185 aa20.23■□□□□ 0.83
PTP4A1-201ENST00000370651 THUMPD2Q9BTF0 503 aaKnown RBP20.23■□□□□ 0.83
PTP4A1-201ENST00000370651 TSPYL1Q9H0U9 437 aa20.23■□□□□ 0.83
PTP4A1-201ENST00000370651 TXLNAP40222 546 aa20.23■□□□□ 0.83
PTP4A1-201ENST00000370651 RPRD2Q5VT52 1461 aaKnown RBP20.23■□□□□ 0.83
PTP4A1-201ENST00000370651 FYB1O15117 783 aa20.23■□□□□ 0.83
PTP4A1-201ENST00000370651 SMARCA5O60264 1052 aaPredicted RBP20.23■□□□□ 0.83
PTP4A1-201ENST00000370651 MCM5P33992 734 aa20.23■□□□□ 0.83
PTP4A1-201ENST00000370651 KIF2AO00139 706 aaPredicted RBP20.22■□□□□ 0.83
PTP4A1-201ENST00000370651 TRIM27P14373 513 aa20.22■□□□□ 0.83
PTP4A1-201ENST00000370651 CAMK4Q16566 473 aa20.22■□□□□ 0.83
PTP4A1-201ENST00000370651 PRDM10Q9NQV6 1147 aa20.22■□□□□ 0.83
PTP4A1-201ENST00000370651 BAG4O95429 457 aaKnown RBP20.22■□□□□ 0.83
PTP4A1-201ENST00000370651 BMP2KLQ5H9B9 411 aa20.22■□□□□ 0.83
PTP4A1-201ENST00000370651 CCDC83Q8IWF9 413 aa20.22■□□□□ 0.83
PTP4A1-201ENST00000370651 ZNHIT6Q9NWK9 470 aaKnown RBP20.22■□□□□ 0.83
PTP4A1-201ENST00000370651 USP25Q9UHP3 1055 aa20.22■□□□□ 0.83
PTP4A1-201ENST00000370651 CDK13Q14004 1512 aaKnown RBP20.22■□□□□ 0.83
PTP4A1-201ENST00000370651 SYTL4Q96C24 671 aaPredicted RBP20.22■□□□□ 0.83
PTP4A1-201ENST00000370651 PTPN14Q15678 1187 aa20.21■□□□□ 0.83
PTP4A1-201ENST00000370651 KLHL40Q2TBA0 621 aa20.21■□□□□ 0.83
PTP4A1-201ENST00000370651 PTPN23Q9H3S7 1636 aa20.21■□□□□ 0.83
PTP4A1-201ENST00000370651 CLCN1P35523 988 aa20.21■□□□□ 0.83
PTP4A1-201ENST00000370651 CCDC158Q5M9N0 1113 aa20.21■□□□□ 0.83
PTP4A1-201ENST00000370651 TAF3Q5VWG9 929 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms