RNA–Protein interactions for RNA: ENST00000369729.7

SFR1-202, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFR1, Length 1,503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-202ENST00000369729 NUTM2GQ5VZR2 741 aa11.81□□□□□ -0.52
SFR1-202ENST00000369729 KIF24Q5T7B8 1368 aa11.81□□□□□ -0.52
SFR1-202ENST00000369729 ROBO1Q9Y6N7 1651 aa11.81□□□□□ -0.52
SFR1-202ENST00000369729 PPM1GO15355 546 aaPredicted RBP11.81□□□□□ -0.52
SFR1-202ENST00000369729 AMPHP49418 695 aa11.81□□□□□ -0.52
SFR1-202ENST00000369729 DDX17Q92841 729 aaKnown RBP11.81□□□□□ -0.52
SFR1-202ENST00000369729 ZRANB1Q9UGI0 708 aa11.81□□□□□ -0.52
SFR1-202ENST00000369729 PIK3C2AO00443 1686 aa11.8□□□□□ -0.52
SFR1-202ENST00000369729 AHDC1Q5TGY3 1603 aaPredicted RBP11.79□□□□□ -0.52
SFR1-202ENST00000369729 TRPM3Q9HCF6 1732 aaPredicted RBP11.79□□□□□ -0.52
SFR1-202ENST00000369729 SOX12O15370 315 aa11.79□□□□□ -0.52
SFR1-202ENST00000369729 GCP02774 474 aa11.79□□□□□ -0.52
SFR1-202ENST00000369729 POLKQ9UBT6 870 aa11.79□□□□□ -0.52
SFR1-202ENST00000369729 NHSL1Q5SYE7 1610 aa11.79□□□□□ -0.52
SFR1-202ENST00000369729 USP54Q70EL1 1684 aa11.79□□□□□ -0.52
SFR1-202ENST00000369729 USP19O94966 1318 aa11.79□□□□□ -0.52
SFR1-202ENST00000369729 PRR29P0C7W0 189 aa11.78□□□□□ -0.52
SFR1-202ENST00000369729 FAM9BQ8IZU0 186 aa11.78□□□□□ -0.52
SFR1-202ENST00000369729 PNNQ9H307 717 aaKnown RBP11.78□□□□□ -0.52
SFR1-202ENST00000369729 DIAPH1O60610 1272 aaKnown RBP11.77□□□□□ -0.52
SFR1-202ENST00000369729 PNISRQ8TF01 805 aaKnown RBP11.77□□□□□ -0.52
SFR1-202ENST00000369729 RTL1A6NKG5 1358 aa11.77□□□□□ -0.53
SFR1-202ENST00000369729 INSRP06213 1382 aa11.77□□□□□ -0.53
SFR1-202ENST00000369729 FLT4P35916 1363 aa11.77□□□□□ -0.53
SFR1-202ENST00000369729 ALS2Q96Q42 1657 aa11.77□□□□□ -0.53
SFR1-202ENST00000369729 SMG6Q86US8 1419 aaKnown RBP11.77□□□□□ -0.53
SFR1-202ENST00000369729 CDK12Q9NYV4 1490 aaPredicted RBP11.77□□□□□ -0.53
SFR1-202ENST00000369729 RRS1Q15050 365 aaKnown RBP11.76□□□□□ -0.53
SFR1-202ENST00000369729 EMILIN1Q9Y6C2 1016 aa11.76□□□□□ -0.53
SFR1-202ENST00000369729 NEFMP07197 916 aa11.76□□□□□ -0.53
SFR1-202ENST00000369729 LHX8Q68G74 356 aa11.76□□□□□ -0.53
SFR1-202ENST00000369729 MAP3K19Q56UN5 1328 aa11.75□□□□□ -0.53
SFR1-202ENST00000369729 PNPLA6Q8IY17 1366 aa11.75□□□□□ -0.53
SFR1-202ENST00000369729 SLIT3O75094 1523 aa11.75□□□□□ -0.53
SFR1-202ENST00000369729 CCDC184Q52MB2 194 aa11.75□□□□□ -0.53
SFR1-202ENST00000369729 MED1Q15648 1581 aaPredicted RBP11.74□□□□□ -0.53
SFR1-202ENST00000369729 ZBTB7CA1YPR0 619 aa11.74□□□□□ -0.53
SFR1-202ENST00000369729 PLEKHG5O94827 1062 aa11.74□□□□□ -0.53
SFR1-202ENST00000369729 IP6K1Q92551 441 aa11.74□□□□□ -0.53
SFR1-202ENST00000369729 PHLPP1O60346 1717 aa11.74□□□□□ -0.53
SFR1-202ENST00000369729 U2SURPO15042 1029 aaKnown RBP11.73□□□□□ -0.53
SFR1-202ENST00000369729 U2AF1L5P0DN76 240 aaPredicted RBP11.73□□□□□ -0.53
SFR1-202ENST00000369729 U2AF1Q01081 240 aaKnown RBP eCLIP11.73□□□□□ -0.53
SFR1-202ENST00000369729 ARHGEF25Q86VW2 580 aa11.73□□□□□ -0.53
SFR1-202ENST00000369729 MAP2P11137 1827 aaKnown RBP11.73□□□□□ -0.53
SFR1-202ENST00000369729 CPDO75976 1380 aa11.72□□□□□ -0.53
SFR1-202ENST00000369729 FBLN1P23142 703 aa11.72□□□□□ -0.53
SFR1-202ENST00000369729 HOXC9P31274 260 aa11.72□□□□□ -0.53
SFR1-202ENST00000369729 ZC3H6P61129 1189 aaKnown RBP11.72□□□□□ -0.53
SFR1-202ENST00000369729 NFAT5O94916 1531 aa11.72□□□□□ -0.53
SFR1-202ENST00000369729 BLMP54132 1417 aaPredicted RBP11.71□□□□□ -0.53
SFR1-202ENST00000369729 PRDM11Q9NQV5 511 aa11.71□□□□□ -0.53
SFR1-202ENST00000369729 JCADQ9P266 1359 aa11.71□□□□□ -0.54
SFR1-202ENST00000369729 HSP90AB2PQ58FF8 381 aa11.7□□□□□ -0.54
SFR1-202ENST00000369729 NGEFQ8N5V2 710 aa11.7□□□□□ -0.54
SFR1-202ENST00000369729 CABLES1Q8TDN4 633 aa11.7□□□□□ -0.54
SFR1-202ENST00000369729 ADAMTS8Q9UP79 889 aa11.7□□□□□ -0.54
SFR1-202ENST00000369729 ABCC6O95255 1503 aa11.7□□□□□ -0.54
SFR1-202ENST00000369729 FCHSD2O94868 740 aa11.7□□□□□ -0.54
SFR1-202ENST00000369729 IL13P35225 146 aa11.7□□□□□ -0.54
SFR1-202ENST00000369729 YTHDC1Q96MU7 727 aaKnown RBP11.7□□□□□ -0.54
SFR1-202ENST00000369729 MARF1Q9Y4F3 1742 aaKnown RBP11.69□□□□□ -0.54
SFR1-202ENST00000369729 COL16A1Q07092 1604 aaPredicted RBP11.69□□□□□ -0.54
SFR1-202ENST00000369729 MAPK8IP3Q9UPT6 1336 aa11.69□□□□□ -0.54
SFR1-202ENST00000369729 POTEIP0CG38 1075 aa11.69□□□□□ -0.54
SFR1-202ENST00000369729 EIF4A2Q14240 407 aaKnown RBP11.69□□□□□ -0.54
SFR1-202ENST00000369729 KIAA0232Q92628 1395 aa11.68□□□□□ -0.54
SFR1-202ENST00000369729 PHRF1Q9P1Y6 1649 aaKnown RBP11.68□□□□□ -0.54
SFR1-202ENST00000369729 SPATA31A6Q5VVP1 1343 aa11.68□□□□□ -0.54
SFR1-202ENST00000369729 HNRNPUQ00839 825 aaKnown RBP eCLIP11.68□□□□□ -0.54
SFR1-202ENST00000369729 RUNDC1Q96C34 613 aa11.68□□□□□ -0.54
SFR1-202ENST00000369729 COL3A1P02461 1466 aaPredicted RBP11.68□□□□□ -0.54
SFR1-202ENST00000369729 COL22A1Q8NFW1 1626 aaPredicted RBP11.68□□□□□ -0.54
SFR1-202ENST00000369729 CSB-PGBD3P0DP91 1061 aa11.67□□□□□ -0.54
SFR1-202ENST00000369729 LTV1Q96GA3 475 aaPredicted RBP11.67□□□□□ -0.54
SFR1-202ENST00000369729 LTN1O94822 1766 aa11.67□□□□□ -0.54
SFR1-202ENST00000369729 EVA1CP58658 441 aa11.66□□□□□ -0.54
SFR1-202ENST00000369729 ANKRD24Q8TF21 1146 aa11.66□□□□□ -0.54
SFR1-202ENST00000369729 CENPBP07199 599 aaPredicted RBP11.65□□□□□ -0.54
SFR1-202ENST00000369729 FARP1Q9Y4F1 1045 aaPredicted RBP11.65□□□□□ -0.54
SFR1-202ENST00000369729 NUTM2BA6NNL0 878 aaPredicted RBP11.65□□□□□ -0.55
SFR1-202ENST00000369729 NUTM2EB1AL46 878 aaPredicted RBP11.65□□□□□ -0.55
SFR1-202ENST00000369729 HSPA1LP34931 641 aa11.65□□□□□ -0.55
SFR1-202ENST00000369729 CHRNA2Q15822 529 aa11.65□□□□□ -0.55
SFR1-202ENST00000369729 SULT6B1Q6IMI4 303 aa11.65□□□□□ -0.55
SFR1-202ENST00000369729 NUTM2AQ8IVF1 878 aaPredicted RBP11.65□□□□□ -0.55
SFR1-202ENST00000369729 PEAK1Q9H792 1746 aa11.64□□□□□ -0.55
SFR1-202ENST00000369729 CRYBG1Q9Y4K1 1723 aa11.64□□□□□ -0.55
SFR1-202ENST00000369729 ERBB3P21860 1342 aa11.64□□□□□ -0.55
SFR1-202ENST00000369729 SHPRHQ149N8 1683 aa11.64□□□□□ -0.55
SFR1-202ENST00000369729 CD44P16070 742 aaKnown RBP11.64□□□□□ -0.55
SFR1-202ENST00000369729 IGSF1Q8N6C5 1336 aa11.63□□□□□ -0.55
SFR1-202ENST00000369729 HMOX1P09601 288 aa11.63□□□□□ -0.55
SFR1-202ENST00000369729 PRKAR2BP31323 418 aa11.63□□□□□ -0.55
SFR1-202ENST00000369729 EYA1Q99502 592 aa11.63□□□□□ -0.55
SFR1-202ENST00000369729 RSPH6AQ9H0K4 717 aa11.63□□□□□ -0.55
SFR1-202ENST00000369729 NLRP2Q9NX02 1062 aa11.63□□□□□ -0.55
SFR1-202ENST00000369729 ABCA3Q99758 1704 aa11.62□□□□□ -0.55
SFR1-202ENST00000369729 FAM83GA6ND36 823 aa11.62□□□□□ -0.55
SFR1-202ENST00000369729 ADAMTS2O95450 1211 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms