RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 AMOTQ4VCS5 1084 aa6.54□□□□□ -1.36
SMNDC1-202ENST00000369603 L1TD1Q5T7N2 865 aaKnown RBP6.54□□□□□ -1.36
SMNDC1-202ENST00000369603 C20orf194Q5TEA3 1177 aa6.54□□□□□ -1.36
SMNDC1-202ENST00000369603 SPG7Q9UQ90 795 aa6.54□□□□□ -1.36
SMNDC1-202ENST00000369603 CCDC9Q9Y3X0 531 aaKnown RBP6.54□□□□□ -1.36
SMNDC1-202ENST00000369603 ZMYM4Q5VZL5 1548 aa6.54□□□□□ -1.36
SMNDC1-202ENST00000369603 RNF17Q9BXT8 1623 aaKnown RBP6.54□□□□□ -1.36
SMNDC1-202ENST00000369603 MAP3K4Q9Y6R4 1608 aa6.54□□□□□ -1.36
SMNDC1-202ENST00000369603 PLEKHH1Q9ULM0 1364 aa6.54□□□□□ -1.36
SMNDC1-202ENST00000369603 GNAI2P04899 355 aa6.54□□□□□ -1.36
SMNDC1-202ENST00000369603 GORABQ5T7V8 394 aa6.54□□□□□ -1.36
SMNDC1-202ENST00000369603 RUFY2Q8WXA3 655 aa6.54□□□□□ -1.36
SMNDC1-202ENST00000369603 INO80Q9ULG1 1556 aaPredicted RBP6.54□□□□□ -1.36
SMNDC1-202ENST00000369603 CDC45O75419 566 aa6.54□□□□□ -1.36
SMNDC1-202ENST00000369603 RPAP2Q8IXW5 612 aaPredicted RBP6.54□□□□□ -1.36
SMNDC1-202ENST00000369603 TMEM57Q8N5G2 664 aa6.53□□□□□ -1.36
SMNDC1-202ENST00000369603 RILPL2Q969X0 211 aa6.53□□□□□ -1.36
SMNDC1-202ENST00000369603 C22orf23Q9BZE7 217 aa6.53□□□□□ -1.36
SMNDC1-202ENST00000369603 G3BP1Q13283 466 aaKnown RBP eCLIP6.53□□□□□ -1.361e-5■■■■□ 21.3
SMNDC1-202ENST00000369603 ARHGAP45Q92619 1136 aa6.53□□□□□ -1.36
SMNDC1-202ENST00000369603 THUMPD2Q9BTF0 503 aaKnown RBP6.53□□□□□ -1.36
SMNDC1-202ENST00000369603 ERC2O15083 957 aa6.52□□□□□ -1.37
SMNDC1-202ENST00000369603 IFIT2P09913 472 aaKnown RBP6.52□□□□□ -1.37
SMNDC1-202ENST00000369603 RIC3Q7Z5B4 369 aa6.52□□□□□ -1.37
SMNDC1-202ENST00000369603 E9PCH4 1651 aa6.52□□□□□ -1.37
SMNDC1-202ENST00000369603 LAMC1P11047 1609 aa6.52□□□□□ -1.37
SMNDC1-202ENST00000369603 TAF7Q15545 349 aaPredicted RBP6.52□□□□□ -1.37
SMNDC1-202ENST00000369603 LRRFIP1Q32MZ4 808 aaKnown RBP6.52□□□□□ -1.37
SMNDC1-202ENST00000369603 RNF123Q5XPI4 1314 aa6.52□□□□□ -1.37
SMNDC1-202ENST00000369603 MCM10Q7L590 875 aa6.52□□□□□ -1.37
SMNDC1-202ENST00000369603 DIAPH3Q9NSV4 1193 aa6.52□□□□□ -1.37
SMNDC1-202ENST00000369603 FLT4P35916 1363 aa6.52□□□□□ -1.37
SMNDC1-202ENST00000369603 PTPRCP08575 1304 aa6.52□□□□□ -1.37
SMNDC1-202ENST00000369603 FOXO3O43524 673 aa6.52□□□□□ -1.37
SMNDC1-202ENST00000369603 TSPOAP1O95153 1857 aa6.52□□□□□ -1.37
SMNDC1-202ENST00000369603 TRIM27P14373 513 aa6.52□□□□□ -1.37
SMNDC1-202ENST00000369603 CADPS2Q86UW7 1296 aa6.52□□□□□ -1.37
SMNDC1-202ENST00000369603 CHD1LQ86WJ1 897 aa6.52□□□□□ -1.37
SMNDC1-202ENST00000369603 SRCIN1Q9C0H9 1055 aa6.52□□□□□ -1.37
SMNDC1-202ENST00000369603 BRPF3Q9ULD4 1205 aa6.52□□□□□ -1.37
SMNDC1-202ENST00000369603 HTATSF1O43719 755 aaKnown RBP6.51□□□□□ -1.37
SMNDC1-202ENST00000369603 NFKBIBQ15653 356 aa6.51□□□□□ -1.37
SMNDC1-202ENST00000369603 ZRSR1Q15695 479 aaKnown RBP6.51□□□□□ -1.37
SMNDC1-202ENST00000369603 MADDQ8WXG6 1647 aa6.51□□□□□ -1.37
SMNDC1-202ENST00000369603 PRDM11Q9NQV5 511 aa6.51□□□□□ -1.37
SMNDC1-202ENST00000369603 GOLGA6L4A6NEF3 574 aa6.51□□□□□ -1.37
SMNDC1-202ENST00000369603 BTBD11A6QL63 1104 aa6.51□□□□□ -1.37
SMNDC1-202ENST00000369603 DDX11L8A8MPP1 907 aa6.51□□□□□ -1.37
SMNDC1-202ENST00000369603 DCTN1Q14203 1278 aa6.51□□□□□ -1.37
SMNDC1-202ENST00000369603 PLEKHG3A1L390 1219 aa6.5□□□□□ -1.37
SMNDC1-202ENST00000369603 HSP90AB2PQ58FF8 381 aa6.5□□□□□ -1.37
SMNDC1-202ENST00000369603 ERC1Q8IUD2 1116 aa6.5□□□□□ -1.37
SMNDC1-202ENST00000369603 CLASRPQ8N2M8 674 aaKnown RBP6.5□□□□□ -1.37
SMNDC1-202ENST00000369603 CHMP4CQ96CF2 233 aa6.5□□□□□ -1.37
SMNDC1-202ENST00000369603 RSPH6AQ9H0K4 717 aa6.5□□□□□ -1.37
SMNDC1-202ENST00000369603 GZF1Q9H116 711 aaPredicted RBP6.5□□□□□ -1.37
SMNDC1-202ENST00000369603 C1orf115Q9H7X2 142 aa6.5□□□□□ -1.37
SMNDC1-202ENST00000369603 MBIPQ9NS73 344 aa6.5□□□□□ -1.37
SMNDC1-202ENST00000369603 NLRP1Q9C000 1473 aa6.5□□□□□ -1.37
SMNDC1-202ENST00000369603 BCORL1Q5H9F3 1711 aa6.5□□□□□ -1.37
SMNDC1-202ENST00000369603 ADGRB3O60242 1522 aa6.5□□□□□ -1.37
SMNDC1-202ENST00000369603 XPCQ01831 940 aaPredicted RBP6.5□□□□□ -1.37
SMNDC1-202ENST00000369603 EIF4A2Q14240 407 aaKnown RBP6.5□□□□□ -1.37
SMNDC1-202ENST00000369603 KRT28Q7Z3Y7 464 aa6.5□□□□□ -1.37
SMNDC1-202ENST00000369603 CHMP5Q9NZZ3 219 aa6.5□□□□□ -1.37
SMNDC1-202ENST00000369603 PLEKHG1Q9ULL1 1385 aa6.5□□□□□ -1.37
SMNDC1-202ENST00000369603 SURF6O75683 361 aaKnown RBP6.5□□□□□ -1.37
SMNDC1-202ENST00000369603 KCNA6P17658 529 aa6.5□□□□□ -1.37
SMNDC1-202ENST00000369603 TOM1L2Q6ZVM7 507 aa6.5□□□□□ -1.37
SMNDC1-202ENST00000369603 NAP1L2Q9ULW6 460 aaPredicted RBP6.5□□□□□ -1.37
SMNDC1-202ENST00000369603 CABP4P57796 275 aa6.49□□□□□ -1.37
SMNDC1-202ENST00000369603 ZC3H6P61129 1189 aaKnown RBP6.49□□□□□ -1.37
SMNDC1-202ENST00000369603 AIMP1Q12904 312 aaKnown RBP6.49□□□□□ -1.37
SMNDC1-202ENST00000369603 SETBP1Q9Y6X0 1596 aa6.49□□□□□ -1.37
SMNDC1-202ENST00000369603 ATP7BP35670 1465 aa6.49□□□□□ -1.37
SMNDC1-202ENST00000369603 ZKSCAN1P17029 563 aaPredicted RBP6.49□□□□□ -1.37
SMNDC1-202ENST00000369603 SYAP1Q96A49 352 aaPredicted RBP6.49□□□□□ -1.37
SMNDC1-202ENST00000369603 FBLN1P23142 703 aa6.49□□□□□ -1.37
SMNDC1-202ENST00000369603 CSPP1Q1MSJ5 1256 aa6.49□□□□□ -1.37
SMNDC1-202ENST00000369603 LRRCC1Q9C099 1032 aa6.49□□□□□ -1.37
SMNDC1-202ENST00000369603 FAM135BQ49AJ0 1406 aa6.49□□□□□ -1.37
SMNDC1-202ENST00000369603 ANO2Q9NQ90 1003 aa6.49□□□□□ -1.37
SMNDC1-202ENST00000369603 KIF3AQ9Y496 699 aa6.49□□□□□ -1.37
SMNDC1-202ENST00000369603 HDAC1Q13547 482 aaPredicted RBP6.48□□□□□ -1.37
SMNDC1-202ENST00000369603 SKOR2Q2VWA4 1001 aaPredicted RBP6.48□□□□□ -1.37
SMNDC1-202ENST00000369603 C19orf44Q9H6X5 657 aa6.48□□□□□ -1.37
SMNDC1-202ENST00000369603 ZRANB1Q9UGI0 708 aa6.48□□□□□ -1.37
SMNDC1-202ENST00000369603 CEP152O94986 1710 aa6.48□□□□□ -1.37
SMNDC1-202ENST00000369603 IL13P35225 146 aa6.48□□□□□ -1.37
SMNDC1-202ENST00000369603 RNF20Q5VTR2 975 aa6.48□□□□□ -1.37
SMNDC1-202ENST00000369603 CNTROBQ8N137 903 aa6.48□□□□□ -1.37
SMNDC1-202ENST00000369603 DIP2CQ9Y2E4 1556 aa6.48□□□□□ -1.37
SMNDC1-202ENST00000369603 DMRT2Q9Y5R5 561 aa6.48□□□□□ -1.37
SMNDC1-202ENST00000369603 SOS1Q07889 1333 aaPredicted RBP6.48□□□□□ -1.37
SMNDC1-202ENST00000369603 NPHP3Q7Z494 1330 aa6.48□□□□□ -1.37
SMNDC1-202ENST00000369603 SBNO1A3KN83 1393 aa6.48□□□□□ -1.37
SMNDC1-202ENST00000369603 MSH6P52701 1360 aa6.48□□□□□ -1.37
SMNDC1-202ENST00000369603 KIDINS220Q9ULH0 1771 aa6.48□□□□□ -1.37
SMNDC1-202ENST00000369603 PPRC1Q5VV67 1664 aaKnown RBP6.47□□□□□ -1.37
SMNDC1-202ENST00000369603 GOLGA6L3A6NEY3 463 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms