RNA–Protein interactions for RNA: ENST00000369600.5

PHTF1-203, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-203ENST00000369600 ADGRB2O60241 1585 aa17.71■□□□□ 0.42
PHTF1-203ENST00000369600 RRP9O43818 475 aaKnown RBP17.7■□□□□ 0.42
PHTF1-203ENST00000369600 ZMYND15Q9H091 742 aa17.7■□□□□ 0.42
PHTF1-203ENST00000369600 RBM27Q9P2N5 1060 aaKnown RBP17.7■□□□□ 0.42
PHTF1-203ENST00000369600 RAPGEF3O95398 923 aa17.7■□□□□ 0.42
PHTF1-203ENST00000369600 FOXD4L6Q3SYB3 417 aaPredicted RBP17.7■□□□□ 0.42
PHTF1-203ENST00000369600 FOXD4L3Q6VB84 417 aaPredicted RBP17.7■□□□□ 0.42
PHTF1-203ENST00000369600 NOL8Q76FK4 1167 aaKnown RBP17.7■□□□□ 0.42
PHTF1-203ENST00000369600 C8orf58Q8NAV2 365 aa17.7■□□□□ 0.42
PHTF1-203ENST00000369600 CDK19Q9BWU1 502 aa17.7■□□□□ 0.42
PHTF1-203ENST00000369600 FCHSD2O94868 740 aa17.7■□□□□ 0.42
PHTF1-203ENST00000369600 PRPF40AO75400 957 aaKnown RBP17.69■□□□□ 0.42
PHTF1-203ENST00000369600 CCDC173Q0VFZ6 552 aa17.69■□□□□ 0.42
PHTF1-203ENST00000369600 PKNOX2Q96KN3 472 aa17.69■□□□□ 0.42
PHTF1-203ENST00000369600 GLI2P10070 1586 aa17.69■□□□□ 0.42
PHTF1-203ENST00000369600 SETBP1Q9Y6X0 1596 aa17.69■□□□□ 0.42
PHTF1-203ENST00000369600 ZGPATQ8N5A5 531 aaKnown RBP17.69■□□□□ 0.42
PHTF1-203ENST00000369600 KRT24Q2M2I5 525 aa17.68■□□□□ 0.42
PHTF1-203ENST00000369600 STAG3Q9UJ98 1225 aa17.68■□□□□ 0.42
PHTF1-203ENST00000369600 RPGRIP1LQ68CZ1 1315 aa17.68■□□□□ 0.42
PHTF1-203ENST00000369600 NFE2L2Q16236 605 aa17.68■□□□□ 0.42
PHTF1-203ENST00000369600 ZRANB1Q9UGI0 708 aa17.68■□□□□ 0.42
PHTF1-203ENST00000369600 KLHL40Q2TBA0 621 aa17.67■□□□□ 0.42
PHTF1-203ENST00000369600 PLEKHM2Q8IWE5 1019 aa17.67■□□□□ 0.42
PHTF1-203ENST00000369600 POLKQ9UBT6 870 aa17.67■□□□□ 0.42
PHTF1-203ENST00000369600 NCBP3Q53F19 620 aaKnown RBP17.66■□□□□ 0.42
PHTF1-203ENST00000369600 OSCARQ8IYS5 282 aa17.66■□□□□ 0.42
PHTF1-203ENST00000369600 PTMSP20962 102 aa17.66■□□□□ 0.42
PHTF1-203ENST00000369600 GNAI1P63096 354 aa17.66■□□□□ 0.42
PHTF1-203ENST00000369600 ZSCAN30Q86W11 494 aa17.66■□□□□ 0.42
PHTF1-203ENST00000369600 R3HCC1Q9Y3T6 440 aaKnown RBP17.66■□□□□ 0.42
PHTF1-203ENST00000369600 ZC3H13Q5T200 1668 aaKnown RBP17.66■□□□□ 0.42
PHTF1-203ENST00000369600 RRS1Q15050 365 aaKnown RBP17.66■□□□□ 0.42
PHTF1-203ENST00000369600 WAPLQ7Z5K2 1190 aa17.66■□□□□ 0.42
PHTF1-203ENST00000369600 RNF214Q8ND24 703 aa17.66■□□□□ 0.42
PHTF1-203ENST00000369600 CHMP4BQ9H444 224 aaKnown RBP17.66■□□□□ 0.42
PHTF1-203ENST00000369600 ZSCAN23Q3MJ62 389 aa17.65■□□□□ 0.42
PHTF1-203ENST00000369600 PPLO60437 1756 aa17.65■□□□□ 0.42
PHTF1-203ENST00000369600 ASXL2Q76L83 1435 aa17.64■□□□□ 0.42
PHTF1-203ENST00000369600 XPCQ01831 940 aaPredicted RBP17.64■□□□□ 0.41
PHTF1-203ENST00000369600 RABEP1Q15276 862 aa17.64■□□□□ 0.41
PHTF1-203ENST00000369600 PRIM1P49642 420 aaKnown RBP17.64■□□□□ 0.41
PHTF1-203ENST00000369600 MPNDQ8N594 471 aa17.64■□□□□ 0.41
PHTF1-203ENST00000369600 SOX12O15370 315 aa17.63■□□□□ 0.41
PHTF1-203ENST00000369600 NPM1P06748 294 aaKnown RBP eCLIP17.63■□□□□ 0.41
PHTF1-203ENST00000369600 RBSNQ9H1K0 784 aa17.63■□□□□ 0.41
PHTF1-203ENST00000369600 FAM13BQ9NYF5 915 aa17.63■□□□□ 0.41
PHTF1-203ENST00000369600 COL3A1P02461 1466 aaPredicted RBP17.63■□□□□ 0.41
PHTF1-203ENST00000369600 KIDINS220Q9ULH0 1771 aa17.63■□□□□ 0.41
PHTF1-203ENST00000369600 NEURL4Q96JN8 1562 aa17.63■□□□□ 0.41
PHTF1-203ENST00000369600 TTC22Q5TAA0 569 aa17.63■□□□□ 0.41
PHTF1-203ENST00000369600 TSHZ3Q63HK5 1081 aa17.63■□□□□ 0.41
PHTF1-203ENST00000369600 CFAP74Q9C0B2 1584 aa17.63■□□□□ 0.41
PHTF1-203ENST00000369600 NME9Q86XW9 330 aa17.62■□□□□ 0.41
PHTF1-203ENST00000369600 CAMSAP1Q5T5Y3 1602 aa17.62■□□□□ 0.41
PHTF1-203ENST00000369600 NUCB2P80303 420 aa17.62■□□□□ 0.41
PHTF1-203ENST00000369600 LRRC7Q96NW7 1537 aa17.62■□□□□ 0.41
PHTF1-203ENST00000369600 USP32Q8NFA0 1604 aa17.62■□□□□ 0.41
PHTF1-203ENST00000369600 SDSP20132 328 aa17.61■□□□□ 0.41
PHTF1-203ENST00000369600 INTS3Q68E01 1043 aaKnown RBP17.61■□□□□ 0.41
PHTF1-203ENST00000369600 SLC4A10Q6U841 1118 aa17.61■□□□□ 0.41
PHTF1-203ENST00000369600 API5Q9BZZ5 524 aaKnown RBP17.61■□□□□ 0.41
PHTF1-203ENST00000369600 SYCE3A1L190 88 aa17.61■□□□□ 0.41
PHTF1-203ENST00000369600 PUS7Q96PZ0 661 aaKnown RBP17.61■□□□□ 0.41
PHTF1-203ENST00000369600 USP26Q9BXU7 913 aa17.61■□□□□ 0.41
PHTF1-203ENST00000369600 LMBRD1Q9NUN5 540 aa17.61■□□□□ 0.41
PHTF1-203ENST00000369600 ST18O60284 1047 aa17.61■□□□□ 0.41
PHTF1-203ENST00000369600 ABCA9Q8IUA7 1624 aa17.6■□□□□ 0.41
PHTF1-203ENST00000369600 CASC1Q6TDU7 716 aa17.6■□□□□ 0.41
PHTF1-203ENST00000369600 ARHGEF28Q8N1W1 1705 aaKnown RBP17.6■□□□□ 0.41
PHTF1-203ENST00000369600 ABCC4O15439 1325 aa17.6■□□□□ 0.41
PHTF1-203ENST00000369600 IFT57Q9NWB7 429 aa17.6■□□□□ 0.41
PHTF1-203ENST00000369600 ARAP3Q8WWN8 1544 aa17.6■□□□□ 0.41
PHTF1-203ENST00000369600 TPM2P07951 284 aa17.59■□□□□ 0.41
PHTF1-203ENST00000369600 PPP1R9BQ96SB3 815 aa17.59■□□□□ 0.41
PHTF1-203ENST00000369600 NCKAP5LQ9HCH0 1330 aa17.59■□□□□ 0.41
PHTF1-203ENST00000369600 FBXO31Q5XUX0 539 aaPredicted RBP17.59■□□□□ 0.41
PHTF1-203ENST00000369600 ARHGAP45Q92619 1136 aa17.59■□□□□ 0.41
PHTF1-203ENST00000369600 ZNF428Q96B54 188 aa17.59■□□□□ 0.41
PHTF1-203ENST00000369600 NSFL1CQ9UNZ2 370 aaKnown RBP17.58■□□□□ 0.41
PHTF1-203ENST00000369600 GPT2Q8TD30 523 aa17.58■□□□□ 0.4
PHTF1-203ENST00000369600 MEIS3Q99687 375 aa17.58■□□□□ 0.4
PHTF1-203ENST00000369600 DCTPP1Q9H773 170 aa17.58■□□□□ 0.4
PHTF1-203ENST00000369600 MIS18AQ9NYP9 233 aa17.58■□□□□ 0.4
PHTF1-203ENST00000369600 NEK4P51957 841 aa17.57■□□□□ 0.4
PHTF1-203ENST00000369600 MED14O60244 1454 aa17.57■□□□□ 0.4
PHTF1-203ENST00000369600 MCM10Q7L590 875 aa17.57■□□□□ 0.4
PHTF1-203ENST00000369600 CFAP44Q96MT7 982 aa17.56■□□□□ 0.4
PHTF1-203ENST00000369600 PTMAP06454 111 aaKnown RBP17.56■□□□□ 0.4
PHTF1-203ENST00000369600 AEBP1Q8IUX7 1158 aa17.56■□□□□ 0.4
PHTF1-203ENST00000369600 FAM135BQ49AJ0 1406 aa17.56■□□□□ 0.4
PHTF1-203ENST00000369600 NUTM2FA1L443 756 aa17.56■□□□□ 0.4
PHTF1-203ENST00000369600 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.56■□□□□ 0.4
PHTF1-203ENST00000369600 OFD1O75665 1012 aa17.55■□□□□ 0.4
PHTF1-203ENST00000369600 TMEM63CQ9P1W3 806 aa17.55■□□□□ 0.4
PHTF1-203ENST00000369600 GDPD2Q9HCC8 539 aa17.55■□□□□ 0.4
PHTF1-203ENST00000369600 CD163L1Q9NR16 1453 aa17.54■□□□□ 0.4
PHTF1-203ENST00000369600 PTCH1Q13635 1447 aa17.54■□□□□ 0.4
PHTF1-203ENST00000369600 YTHDC2Q9H6S0 1430 aaKnown RBP17.54■□□□□ 0.4
PHTF1-203ENST00000369600 F6X3S4 739 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms