RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 PHF23Q9BUL5 403 aaPredicted RBP22.07■■□□□ 1.12
PHGDH-202ENST00000369409 DLG5Q8TDM6 1919 aa22.07■■□□□ 1.12
PHGDH-202ENST00000369409 SLFN5Q08AF3 891 aa22.07■■□□□ 1.12
PHGDH-202ENST00000369409 DUSP27Q5VZP5 1158 aa22.07■■□□□ 1.12
PHGDH-202ENST00000369409 PXDNQ92626 1479 aa22.07■■□□□ 1.12
PHGDH-202ENST00000369409 NPHP3Q7Z494 1330 aa22.06■■□□□ 1.12
PHGDH-202ENST00000369409 TMPOP42166 694 aaKnown RBP22.06■■□□□ 1.12
PHGDH-202ENST00000369409 CCDC27Q2M243 656 aa22.06■■□□□ 1.12
PHGDH-202ENST00000369409 SPINK5Q9NQ38 1064 aaPredicted RBP22.06■■□□□ 1.12
PHGDH-202ENST00000369409 RTL1A6NKG5 1358 aa22.06■■□□□ 1.12
PHGDH-202ENST00000369409 IRX6P78412 446 aaPredicted RBP22.05■■□□□ 1.12
PHGDH-202ENST00000369409 NCBP3Q53F19 620 aaKnown RBP22.05■■□□□ 1.12
PHGDH-202ENST00000369409 NEFMP07197 916 aa22.04■■□□□ 1.12
PHGDH-202ENST00000369409 HOXC9P31274 260 aa22.04■■□□□ 1.12
PHGDH-202ENST00000369409 KCNH5Q8NCM2 988 aa22.04■■□□□ 1.12
PHGDH-202ENST00000369409 USP19O94966 1318 aa22.04■■□□□ 1.12
PHGDH-202ENST00000369409 MED1Q15648 1581 aaPredicted RBP22.04■■□□□ 1.12
PHGDH-202ENST00000369409 E9PSI1 815 aa22.03■■□□□ 1.12
PHGDH-202ENST00000369409 PLEKHG5O94827 1062 aa22.03■■□□□ 1.12
PHGDH-202ENST00000369409 BRINP3Q76B58 766 aa22.03■■□□□ 1.12
PHGDH-202ENST00000369409 RCAN3Q9UKA8 241 aa22.03■■□□□ 1.12
PHGDH-202ENST00000369409 TNS3Q68CZ2 1445 aa22.03■■□□□ 1.12
PHGDH-202ENST00000369409 ARHGEF10O15013 1369 aa22.03■■□□□ 1.12
PHGDH-202ENST00000369409 CRYBG1Q9Y4K1 1723 aa22.02■■□□□ 1.12
PHGDH-202ENST00000369409 AEBP1Q8IUX7 1158 aa22.02■■□□□ 1.12
PHGDH-202ENST00000369409 TRMT2AQ8IZ69 625 aaKnown RBP22.02■■□□□ 1.12
PHGDH-202ENST00000369409 RNF123Q5XPI4 1314 aa22.01■■□□□ 1.11
PHGDH-202ENST00000369409 SULT6B1Q6IMI4 303 aa22■■□□□ 1.11
PHGDH-202ENST00000369409 PHACTR3Q96KR7 559 aa22■■□□□ 1.11
PHGDH-202ENST00000369409 SLAIN2Q9P270 581 aa22■■□□□ 1.11
PHGDH-202ENST00000369409 RIPK4P57078 832 aa22■■□□□ 1.11
PHGDH-202ENST00000369409 WDR63Q8IWG1 891 aa22■■□□□ 1.11
PHGDH-202ENST00000369409 NHSL1Q5SYE7 1610 aa21.99■■□□□ 1.11
PHGDH-202ENST00000369409 GCP02774 474 aa21.99■■□□□ 1.11
PHGDH-202ENST00000369409 TRIM35Q9UPQ4 493 aa21.99■■□□□ 1.11
PHGDH-202ENST00000369409 LTBP4Q8N2S1 1624 aa21.99■■□□□ 1.11
PHGDH-202ENST00000369409 RGPD2P0DJD1 1756 aa21.99■■□□□ 1.11
PHGDH-202ENST00000369409 ZBTB7CA1YPR0 619 aa21.98■■□□□ 1.11
PHGDH-202ENST00000369409 RGPD5Q99666 1765 aa21.98■■□□□ 1.11
PHGDH-202ENST00000369409 IGSF1Q8N6C5 1336 aa21.97■■□□□ 1.11
PHGDH-202ENST00000369409 NFE2L2Q16236 605 aa21.97■■□□□ 1.11
PHGDH-202ENST00000369409 IP6K1Q92551 441 aa21.96■■□□□ 1.11
PHGDH-202ENST00000369409 KDRP35968 1356 aa21.96■■□□□ 1.11
PHGDH-202ENST00000369409 LTV1Q96GA3 475 aaPredicted RBP21.95■■□□□ 1.1
PHGDH-202ENST00000369409 EYA1Q99502 592 aa21.95■■□□□ 1.1
PHGDH-202ENST00000369409 SPATA31A3Q5VYP0 1347 aa21.95■■□□□ 1.1
PHGDH-202ENST00000369409 RRP1P56182 461 aaKnown RBP21.94■■□□□ 1.1
PHGDH-202ENST00000369409 ARHGEF25Q86VW2 580 aa21.94■■□□□ 1.1
PHGDH-202ENST00000369409 ABCA3Q99758 1704 aa21.92■■□□□ 1.1
PHGDH-202ENST00000369409 SOS2Q07890 1332 aaPredicted RBP21.91■■□□□ 1.1
PHGDH-202ENST00000369409 ROBO1Q9Y6N7 1651 aa21.91■■□□□ 1.1
PHGDH-202ENST00000369409 MYH16Q9H6N6 1097 aa21.9■■□□□ 1.1
PHGDH-202ENST00000369409 CAMTA1Q9Y6Y1 1673 aa21.9■■□□□ 1.1
PHGDH-202ENST00000369409 IL16Q14005 1332 aa21.89■■□□□ 1.1
PHGDH-202ENST00000369409 COL18A1P39060 1754 aa21.89■■□□□ 1.1
PHGDH-202ENST00000369409 CABLES1Q8TDN4 633 aa21.88■■□□□ 1.09
PHGDH-202ENST00000369409 ZC3H6P61129 1189 aaKnown RBP21.88■■□□□ 1.09
PHGDH-202ENST00000369409 FANCIQ9NVI1 1328 aa21.87■■□□□ 1.09
PHGDH-202ENST00000369409 LMOD3Q0VAK6 560 aa21.87■■□□□ 1.09
PHGDH-202ENST00000369409 ERICH6BQ5W0A0 696 aa21.86■■□□□ 1.09
PHGDH-202ENST00000369409 USHBP1Q8N6Y0 703 aa21.86■■□□□ 1.09
PHGDH-202ENST00000369409 TSR2Q969E8 191 aaKnown RBP21.86■■□□□ 1.09
PHGDH-202ENST00000369409 THUMPD2Q9BTF0 503 aaKnown RBP21.86■■□□□ 1.09
PHGDH-202ENST00000369409 PELP1Q8IZL8 1130 aaKnown RBP21.86■■□□□ 1.09
PHGDH-202ENST00000369409 ABCC6O95255 1503 aa21.85■■□□□ 1.09
PHGDH-202ENST00000369409 FAM83GA6ND36 823 aa21.83■■□□□ 1.09
PHGDH-202ENST00000369409 AXIN2Q9Y2T1 843 aa21.83■■□□□ 1.09
PHGDH-202ENST00000369409 FAM208AQ9UK61 1670 aaKnown RBP21.83■■□□□ 1.09
PHGDH-202ENST00000369409 PLIN1O60240 522 aa21.83■■□□□ 1.08
PHGDH-202ENST00000369409 NBPF6Q5VWK0 638 aa21.83■■□□□ 1.08
PHGDH-202ENST00000369409 ANKRD24Q8TF21 1146 aa21.83■■□□□ 1.08
PHGDH-202ENST00000369409 LRRC59Q96AG4 307 aaKnown RBP21.83■■□□□ 1.08
PHGDH-202ENST00000369409 NBPF4Q96M43 638 aa21.83■■□□□ 1.08
PHGDH-202ENST00000369409 LMO7Q8WWI1 1683 aa21.83■■□□□ 1.08
PHGDH-202ENST00000369409 CALD1Q05682 793 aaKnown RBP21.82■■□□□ 1.08
PHGDH-202ENST00000369409 MTHFSDQ2M296 383 aaKnown RBP21.82■■□□□ 1.08
PHGDH-202ENST00000369409 AHDC1Q5TGY3 1603 aaPredicted RBP21.82■■□□□ 1.08
PHGDH-202ENST00000369409 NCAPD2Q15021 1401 aa21.81■■□□□ 1.08
PHGDH-202ENST00000369409 DCTN1Q14203 1278 aa21.81■■□□□ 1.08
PHGDH-202ENST00000369409 KIAA0232Q92628 1395 aa21.8■■□□□ 1.08
PHGDH-202ENST00000369409 LAS1LQ9Y4W2 734 aaKnown RBP21.8■■□□□ 1.08
PHGDH-202ENST00000369409 LRRC37A3O60309 1634 aa21.8■■□□□ 1.08
PHGDH-202ENST00000369409 CPDO75976 1380 aa21.8■■□□□ 1.08
PHGDH-202ENST00000369409 ERBB3P21860 1342 aa21.8■■□□□ 1.08
PHGDH-202ENST00000369409 GAS2L2Q8NHY3 880 aa21.79■■□□□ 1.08
PHGDH-202ENST00000369409 BCAR3O75815 825 aa21.79■■□□□ 1.08
PHGDH-202ENST00000369409 EXOSC9Q06265 439 aaKnown RBP21.79■■□□□ 1.08
PHGDH-202ENST00000369409 IFT57Q9NWB7 429 aa21.78■■□□□ 1.08
PHGDH-202ENST00000369409 CHRNA2Q15822 529 aa21.77■■□□□ 1.08
PHGDH-202ENST00000369409 PPP4R2Q9NY27 417 aa21.77■■□□□ 1.08
PHGDH-202ENST00000369409 GNAI1P63096 354 aa21.77■■□□□ 1.08
PHGDH-202ENST00000369409 MCM10Q7L590 875 aa21.77■■□□□ 1.08
PHGDH-202ENST00000369409 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.76■■□□□ 1.07
PHGDH-202ENST00000369409 VIRMAQ69YN4 1812 aaKnown RBP21.76■■□□□ 1.07
PHGDH-202ENST00000369409 ZNF853P0CG23 659 aa21.75■■□□□ 1.07
PHGDH-202ENST00000369409 RARSP54136 660 aaKnown RBP21.75■■□□□ 1.07
PHGDH-202ENST00000369409 PHLPP1O60346 1717 aa21.75■■□□□ 1.07
PHGDH-202ENST00000369409 HAP1P54257 671 aaPredicted RBP21.75■■□□□ 1.07
PHGDH-202ENST00000369409 CT47B1P0C2W7 299 aaPredicted RBP21.74■■□□□ 1.07
PHGDH-202ENST00000369409 CFAP44Q96MT7 982 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms