RNA–Protein interactions for RNA: ENST00000369128.9

VPS45-201, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2 BASIC

Gene VPS45, Length 2,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-201ENST00000369128 PHACTR3Q96KR7 559 aa11.87□□□□□ -0.51
VPS45-201ENST00000369128 MAPK8IP3Q9UPT6 1336 aa11.87□□□□□ -0.51
VPS45-201ENST00000369128 ATF3P18847 181 aa11.86□□□□□ -0.51
VPS45-201ENST00000369128 AEBP1Q8IUX7 1158 aa11.86□□□□□ -0.51
VPS45-201ENST00000369128 TRIM35Q9UPQ4 493 aa11.86□□□□□ -0.51
VPS45-201ENST00000369128 PHRF1Q9P1Y6 1649 aaKnown RBP11.86□□□□□ -0.51
VPS45-201ENST00000369128 SLIT3O75094 1523 aa11.86□□□□□ -0.51
VPS45-201ENST00000369128 E9PSI1 815 aa11.86□□□□□ -0.51
VPS45-201ENST00000369128 RRP1P56182 461 aaKnown RBP11.86□□□□□ -0.51
VPS45-201ENST00000369128 DDX17Q92841 729 aaKnown RBP11.86□□□□□ -0.51
VPS45-201ENST00000369128 MSH6P52701 1360 aa11.85□□□□□ -0.51
VPS45-201ENST00000369128 NCBP3Q53F19 620 aaKnown RBP11.84□□□□□ -0.51
VPS45-201ENST00000369128 CADPS2Q86UW7 1296 aa11.84□□□□□ -0.51
VPS45-201ENST00000369128 MED1Q15648 1581 aaPredicted RBP11.84□□□□□ -0.51
VPS45-201ENST00000369128 RGPD2P0DJD1 1756 aa11.83□□□□□ -0.52
VPS45-201ENST00000369128 CRYBG1Q9Y4K1 1723 aa11.83□□□□□ -0.52
VPS45-201ENST00000369128 PXDNQ92626 1479 aa11.83□□□□□ -0.52
VPS45-201ENST00000369128 HOXC9P31274 260 aa11.83□□□□□ -0.52
VPS45-201ENST00000369128 RIPK4P57078 832 aa11.83□□□□□ -0.52
VPS45-201ENST00000369128 WDR63Q8IWG1 891 aa11.83□□□□□ -0.52
VPS45-201ENST00000369128 KIF24Q5T7B8 1368 aa11.82□□□□□ -0.52
VPS45-201ENST00000369128 PLIN1O60240 522 aa11.82□□□□□ -0.52
VPS45-201ENST00000369128 AMPHP49418 695 aa11.82□□□□□ -0.52
VPS45-201ENST00000369128 SULT6B1Q6IMI4 303 aa11.82□□□□□ -0.52
VPS45-201ENST00000369128 KRT28Q7Z3Y7 464 aa11.82□□□□□ -0.52
VPS45-201ENST00000369128 RGPD5Q99666 1765 aa11.82□□□□□ -0.52
VPS45-201ENST00000369128 ARHGEF10O15013 1369 aa11.82□□□□□ -0.52
VPS45-201ENST00000369128 USP19O94966 1318 aa11.82□□□□□ -0.52
VPS45-201ENST00000369128 RTL1A6NKG5 1358 aa11.81□□□□□ -0.52
VPS45-201ENST00000369128 KDRP35968 1356 aa11.81□□□□□ -0.52
VPS45-201ENST00000369128 PLEKHG5O94827 1062 aa11.81□□□□□ -0.52
VPS45-201ENST00000369128 PNNQ9H307 717 aaKnown RBP11.81□□□□□ -0.52
VPS45-201ENST00000369128 IGSF1Q8N6C5 1336 aa11.81□□□□□ -0.52
VPS45-201ENST00000369128 NFE2L2Q16236 605 aa11.8□□□□□ -0.52
VPS45-201ENST00000369128 LMOD2Q6P5Q4 547 aa11.8□□□□□ -0.52
VPS45-201ENST00000369128 TSR2Q969E8 191 aaKnown RBP11.8□□□□□ -0.52
VPS45-201ENST00000369128 FANCIQ9NVI1 1328 aa11.79□□□□□ -0.52
VPS45-201ENST00000369128 ERICH6BQ5W0A0 696 aa11.79□□□□□ -0.52
VPS45-201ENST00000369128 BRINP3Q76B58 766 aa11.79□□□□□ -0.52
VPS45-201ENST00000369128 EYA1Q99502 592 aa11.79□□□□□ -0.52
VPS45-201ENST00000369128 THUMPD2Q9BTF0 503 aaKnown RBP11.79□□□□□ -0.52
VPS45-201ENST00000369128 GCP02774 474 aa11.79□□□□□ -0.52
VPS45-201ENST00000369128 TNS3Q68CZ2 1445 aa11.79□□□□□ -0.52
VPS45-201ENST00000369128 C20orf194Q5TEA3 1177 aa11.78□□□□□ -0.52
VPS45-201ENST00000369128 NPHP3Q7Z494 1330 aa11.78□□□□□ -0.52
VPS45-201ENST00000369128 FAM83GA6ND36 823 aa11.78□□□□□ -0.52
VPS45-201ENST00000369128 BCAR3O75815 825 aa11.78□□□□□ -0.52
VPS45-201ENST00000369128 NEFMP07197 916 aa11.78□□□□□ -0.52
VPS45-201ENST00000369128 KCNH5Q8NCM2 988 aa11.78□□□□□ -0.52
VPS45-201ENST00000369128 LTV1Q96GA3 475 aaPredicted RBP11.77□□□□□ -0.53
VPS45-201ENST00000369128 IL16Q14005 1332 aa11.77□□□□□ -0.53
VPS45-201ENST00000369128 NHSL1Q5SYE7 1610 aa11.77□□□□□ -0.53
VPS45-201ENST00000369128 B4GALNT3Q6L9W6 998 aa11.76□□□□□ -0.53
VPS45-201ENST00000369128 ARHGEF25Q86VW2 580 aa11.76□□□□□ -0.53
VPS45-201ENST00000369128 IP6K1Q92551 441 aa11.76□□□□□ -0.53
VPS45-201ENST00000369128 MYH16Q9H6N6 1097 aa11.76□□□□□ -0.53
VPS45-201ENST00000369128 PPP4R2Q9NY27 417 aa11.76□□□□□ -0.53
VPS45-201ENST00000369128 CAMTA1Q9Y6Y1 1673 aa11.76□□□□□ -0.53
VPS45-201ENST00000369128 COL18A1P39060 1754 aa11.76□□□□□ -0.53
VPS45-201ENST00000369128 ZBTB7CA1YPR0 619 aa11.76□□□□□ -0.53
VPS45-201ENST00000369128 ILDR1Q86SU0 546 aaPredicted RBP11.76□□□□□ -0.53
VPS45-201ENST00000369128 EXOC6Q8TAG9 804 aa11.76□□□□□ -0.53
VPS45-201ENST00000369128 ABCA3Q99758 1704 aa11.76□□□□□ -0.53
VPS45-201ENST00000369128 DCTN1Q14203 1278 aa11.75□□□□□ -0.53
VPS45-201ENST00000369128 USHBP1Q8N6Y0 703 aa11.75□□□□□ -0.53
VPS45-201ENST00000369128 SLAIN2Q9P270 581 aa11.75□□□□□ -0.53
VPS45-201ENST00000369128 LTBP4Q8N2S1 1624 aa11.75□□□□□ -0.53
VPS45-201ENST00000369128 SPATA31A3Q5VYP0 1347 aa11.75□□□□□ -0.53
VPS45-201ENST00000369128 LRRC37A3O60309 1634 aa11.74□□□□□ -0.53
VPS45-201ENST00000369128 CABLES1Q8TDN4 633 aa11.74□□□□□ -0.53
VPS45-201ENST00000369128 AXIN2Q9Y2T1 843 aa11.74□□□□□ -0.53
VPS45-201ENST00000369128 RARSP54136 660 aaKnown RBP11.74□□□□□ -0.53
VPS45-201ENST00000369128 EXOSC9Q06265 439 aaKnown RBP11.74□□□□□ -0.53
VPS45-201ENST00000369128 MTHFSDQ2M296 383 aaKnown RBP11.74□□□□□ -0.53
VPS45-201ENST00000369128 LMO7Q8WWI1 1683 aa11.73□□□□□ -0.53
VPS45-201ENST00000369128 ZC3H6P61129 1189 aaKnown RBP11.73□□□□□ -0.53
VPS45-201ENST00000369128 NBPF6Q5VWK0 638 aa11.73□□□□□ -0.53
VPS45-201ENST00000369128 LRRC59Q96AG4 307 aaKnown RBP11.73□□□□□ -0.53
VPS45-201ENST00000369128 NBPF4Q96M43 638 aa11.73□□□□□ -0.53
VPS45-201ENST00000369128 CRBNQ96SW2 442 aa11.73□□□□□ -0.53
VPS45-201ENST00000369128 BCL2L13Q9BXK5 485 aa11.73□□□□□ -0.53
VPS45-201ENST00000369128 NCAPD2Q15021 1401 aa11.73□□□□□ -0.53
VPS45-201ENST00000369128 SOS2Q07890 1332 aaPredicted RBP11.72□□□□□ -0.53
VPS45-201ENST00000369128 ZNF853P0CG23 659 aa11.72□□□□□ -0.53
VPS45-201ENST00000369128 MCM10Q7L590 875 aa11.72□□□□□ -0.53
VPS45-201ENST00000369128 VIRMAQ69YN4 1812 aaKnown RBP11.72□□□□□ -0.53
VPS45-201ENST00000369128 LAS1LQ9Y4W2 734 aaKnown RBP11.71□□□□□ -0.53
VPS45-201ENST00000369128 FAM208AQ9UK61 1670 aaKnown RBP11.71□□□□□ -0.53
VPS45-201ENST00000369128 ROBO1Q9Y6N7 1651 aa11.71□□□□□ -0.53
VPS45-201ENST00000369128 LMOD3Q0VAK6 560 aa11.71□□□□□ -0.54
VPS45-201ENST00000369128 MBIPQ9NS73 344 aa11.71□□□□□ -0.54
VPS45-201ENST00000369128 IFT57Q9NWB7 429 aa11.71□□□□□ -0.54
VPS45-201ENST00000369128 ERBB3P21860 1342 aa11.7□□□□□ -0.54
VPS45-201ENST00000369128 CRB1P82279 1406 aa11.7□□□□□ -0.54
VPS45-201ENST00000369128 ANKRD24Q8TF21 1146 aa11.7□□□□□ -0.54
VPS45-201ENST00000369128 TNNQ9UQP3 1299 aa11.7□□□□□ -0.54
VPS45-201ENST00000369128 ABCC6O95255 1503 aa11.69□□□□□ -0.54
VPS45-201ENST00000369128 KIAA0232Q92628 1395 aa11.69□□□□□ -0.54
VPS45-201ENST00000369128 CFAP44Q96MT7 982 aa11.69□□□□□ -0.54
VPS45-201ENST00000369128 GNAI1P63096 354 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms