RNA–Protein interactions for RNA: ENST00000368209.9

HDGF-203, Transcript of heparin binding growth factor, humanhuman

TSL 2 BASIC

Gene HDGF, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-203ENST00000368209 PAK3O75914 559 aaPredicted RBP17.49■□□□□ 0.39
HDGF-203ENST00000368209 PHACTR3Q96KR7 559 aa17.49■□□□□ 0.39
HDGF-203ENST00000368209 FLT4P35916 1363 aa17.49■□□□□ 0.39
HDGF-203ENST00000368209 PSME1Q06323 249 aa17.49■□□□□ 0.39
HDGF-203ENST00000368209 MAPK8IP3Q9UPT6 1336 aa17.48■□□□□ 0.39
HDGF-203ENST00000368209 PNNQ9H307 717 aaKnown RBP17.48■□□□□ 0.39
HDGF-203ENST00000368209 KIF24Q5T7B8 1368 aa17.47■□□□□ 0.39
HDGF-203ENST00000368209 ZNF335Q9H4Z2 1342 aaPredicted RBP17.47■□□□□ 0.39
HDGF-203ENST00000368209 ATF3P18847 181 aa17.46■□□□□ 0.39
HDGF-203ENST00000368209 SLIT3O75094 1523 aa17.46■□□□□ 0.39
HDGF-203ENST00000368209 ALS2Q96Q42 1657 aa17.46■□□□□ 0.39
HDGF-203ENST00000368209 LTN1O94822 1766 aa17.46■□□□□ 0.39
HDGF-203ENST00000368209 XPCQ01831 940 aaPredicted RBP17.46■□□□□ 0.39
HDGF-203ENST00000368209 PHRF1Q9P1Y6 1649 aaKnown RBP17.46■□□□□ 0.38
HDGF-203ENST00000368209 AEBP1Q8IUX7 1158 aa17.45■□□□□ 0.38
HDGF-203ENST00000368209 RIPK4P57078 832 aa17.45■□□□□ 0.38
HDGF-203ENST00000368209 MSH6P52701 1360 aa17.44■□□□□ 0.38
HDGF-203ENST00000368209 DLG5Q8TDM6 1919 aa17.44■□□□□ 0.38
HDGF-203ENST00000368209 CADPS2Q86UW7 1296 aa17.44■□□□□ 0.38
HDGF-203ENST00000368209 HOXC9P31274 260 aa17.43■□□□□ 0.38
HDGF-203ENST00000368209 NFE2L2Q16236 605 aa17.43■□□□□ 0.38
HDGF-203ENST00000368209 ARHGEF10O15013 1369 aa17.43■□□□□ 0.38
HDGF-203ENST00000368209 USP19O94966 1318 aa17.43■□□□□ 0.38
HDGF-203ENST00000368209 KRT28Q7Z3Y7 464 aa17.43■□□□□ 0.38
HDGF-203ENST00000368209 PPP4R2Q9NY27 417 aa17.42■□□□□ 0.38
HDGF-203ENST00000368209 RTL1A6NKG5 1358 aa17.42■□□□□ 0.38
HDGF-203ENST00000368209 KDRP35968 1356 aa17.42■□□□□ 0.38
HDGF-203ENST00000368209 AMPHP49418 695 aa17.42■□□□□ 0.38
HDGF-203ENST00000368209 SULT6B1Q6IMI4 303 aa17.42■□□□□ 0.38
HDGF-203ENST00000368209 IL16Q14005 1332 aa17.41■□□□□ 0.38
HDGF-203ENST00000368209 IGSF1Q8N6C5 1336 aa17.41■□□□□ 0.38
HDGF-203ENST00000368209 PLIN1O60240 522 aa17.41■□□□□ 0.38
HDGF-203ENST00000368209 PXDNQ92626 1479 aa17.4■□□□□ 0.38
HDGF-203ENST00000368209 DDX17Q92841 729 aaKnown RBP17.4■□□□□ 0.38
HDGF-203ENST00000368209 MED1Q15648 1581 aaPredicted RBP17.4■□□□□ 0.38
HDGF-203ENST00000368209 EYA1Q99502 592 aa17.39■□□□□ 0.37
HDGF-203ENST00000368209 FANCIQ9NVI1 1328 aa17.39■□□□□ 0.37
HDGF-203ENST00000368209 KCNH5Q8NCM2 988 aa17.38■□□□□ 0.37
HDGF-203ENST00000368209 MYH16Q9H6N6 1097 aa17.38■□□□□ 0.37
HDGF-203ENST00000368209 IP6K1Q92551 441 aa17.38■□□□□ 0.37
HDGF-203ENST00000368209 GCP02774 474 aa17.37■□□□□ 0.37
HDGF-203ENST00000368209 BCAR3O75815 825 aa17.36■□□□□ 0.37
HDGF-203ENST00000368209 NEFMP07197 916 aa17.36■□□□□ 0.37
HDGF-203ENST00000368209 C20orf194Q5TEA3 1177 aa17.36■□□□□ 0.37
HDGF-203ENST00000368209 TSR2Q969E8 191 aaKnown RBP17.36■□□□□ 0.37
HDGF-203ENST00000368209 BRINP3Q76B58 766 aa17.36■□□□□ 0.37
HDGF-203ENST00000368209 ARHGEF25Q86VW2 580 aa17.36■□□□□ 0.37
HDGF-203ENST00000368209 CRYBG1Q9Y4K1 1723 aa17.36■□□□□ 0.37
HDGF-203ENST00000368209 EXOC6Q8TAG9 804 aa17.35■□□□□ 0.37
HDGF-203ENST00000368209 NPHP3Q7Z494 1330 aa17.35■□□□□ 0.37
HDGF-203ENST00000368209 THUMPD2Q9BTF0 503 aaKnown RBP17.35■□□□□ 0.37
HDGF-203ENST00000368209 RARSP54136 660 aaKnown RBP17.34■□□□□ 0.37
HDGF-203ENST00000368209 TNS3Q68CZ2 1445 aa17.34■□□□□ 0.37
HDGF-203ENST00000368209 B4GALNT3Q6L9W6 998 aa17.34■□□□□ 0.37
HDGF-203ENST00000368209 ZNF853P0CG23 659 aa17.33■□□□□ 0.36
HDGF-203ENST00000368209 RGPD2P0DJD1 1756 aa17.32■□□□□ 0.36
HDGF-203ENST00000368209 FAM83GA6ND36 823 aa17.32■□□□□ 0.36
HDGF-203ENST00000368209 LMOD2Q6P5Q4 547 aa17.32■□□□□ 0.36
HDGF-203ENST00000368209 SPATA31A3Q5VYP0 1347 aa17.31■□□□□ 0.36
HDGF-203ENST00000368209 EXOSC9Q06265 439 aaKnown RBP17.31■□□□□ 0.36
HDGF-203ENST00000368209 SLAIN2Q9P270 581 aa17.31■□□□□ 0.36
HDGF-203ENST00000368209 NCAPD2Q15021 1401 aa17.31■□□□□ 0.36
HDGF-203ENST00000368209 CRBNQ96SW2 442 aa17.3■□□□□ 0.36
HDGF-203ENST00000368209 CAMTA1Q9Y6Y1 1673 aa17.3■□□□□ 0.36
HDGF-203ENST00000368209 CT47B1P0C2W7 299 aaPredicted RBP17.3■□□□□ 0.36
HDGF-203ENST00000368209 LMOD3Q0VAK6 560 aa17.3■□□□□ 0.36
HDGF-203ENST00000368209 COL18A1P39060 1754 aa17.29■□□□□ 0.36
HDGF-203ENST00000368209 DCTN1Q14203 1278 aa17.29■□□□□ 0.36
HDGF-203ENST00000368209 MTHFSDQ2M296 383 aaKnown RBP17.29■□□□□ 0.36
HDGF-203ENST00000368209 LTV1Q96GA3 475 aaPredicted RBP17.29■□□□□ 0.36
HDGF-203ENST00000368209 IFT57Q9NWB7 429 aa17.29■□□□□ 0.36
HDGF-203ENST00000368209 RGPD5Q99666 1765 aa17.29■□□□□ 0.36
HDGF-203ENST00000368209 SOS2Q07890 1332 aaPredicted RBP17.28■□□□□ 0.36
HDGF-203ENST00000368209 NBPF6Q5VWK0 638 aa17.28■□□□□ 0.36
HDGF-203ENST00000368209 NBPF4Q96M43 638 aa17.28■□□□□ 0.36
HDGF-203ENST00000368209 AXIN2Q9Y2T1 843 aa17.28■□□□□ 0.36
HDGF-203ENST00000368209 CALD1Q05682 793 aaKnown RBP17.28■□□□□ 0.36
HDGF-203ENST00000368209 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.28■□□□□ 0.36
HDGF-203ENST00000368209 LMO7Q8WWI1 1683 aa17.27■□□□□ 0.35
HDGF-203ENST00000368209 CRB1P82279 1406 aa17.27■□□□□ 0.35
HDGF-203ENST00000368209 NHSL1Q5SYE7 1610 aa17.27■□□□□ 0.35
HDGF-203ENST00000368209 PLEKHG5O94827 1062 aa17.26■□□□□ 0.35
HDGF-203ENST00000368209 USHBP1Q8N6Y0 703 aa17.26■□□□□ 0.35
HDGF-203ENST00000368209 CFAP44Q96MT7 982 aa17.26■□□□□ 0.35
HDGF-203ENST00000368209 MBIPQ9NS73 344 aa17.26■□□□□ 0.35
HDGF-203ENST00000368209 LRRC37A3O60309 1634 aa17.26■□□□□ 0.35
HDGF-203ENST00000368209 LTBP4Q8N2S1 1624 aa17.26■□□□□ 0.35
HDGF-203ENST00000368209 GNAI1P63096 354 aa17.26■□□□□ 0.35
HDGF-203ENST00000368209 MCM10Q7L590 875 aa17.25■□□□□ 0.35
HDGF-203ENST00000368209 LRRC59Q96AG4 307 aaKnown RBP17.25■□□□□ 0.35
HDGF-203ENST00000368209 BCL2L13Q9BXK5 485 aa17.25■□□□□ 0.35
HDGF-203ENST00000368209 ZBTB7CA1YPR0 619 aa17.24■□□□□ 0.35
HDGF-203ENST00000368209 CABLES1Q8TDN4 633 aa17.24■□□□□ 0.35
HDGF-203ENST00000368209 ZC3H6P61129 1189 aaKnown RBP17.23■□□□□ 0.35
HDGF-203ENST00000368209 PDE3AQ14432 1141 aa17.23■□□□□ 0.35
HDGF-203ENST00000368209 CCDC136Q96JN2 1154 aa17.23■□□□□ 0.35
HDGF-203ENST00000368209 LAS1LQ9Y4W2 734 aaKnown RBP17.23■□□□□ 0.35
HDGF-203ENST00000368209 ABCC6O95255 1503 aa17.23■□□□□ 0.35
HDGF-203ENST00000368209 GAS2L2Q8NHY3 880 aa17.23■□□□□ 0.35
HDGF-203ENST00000368209 ANKRD24Q8TF21 1146 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms