RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 A2MP01023 1474 aa14.1□□□□□ -0.15
COPA-202ENST00000368069 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.1□□□□□ -0.15
COPA-202ENST00000368069 TBC1D32Q96NH3 1257 aa14.1□□□□□ -0.15
COPA-202ENST00000368069 SRCIN1Q9C0H9 1055 aa14.1□□□□□ -0.15
COPA-202ENST00000368069 FOSBP53539 338 aa14.1□□□□□ -0.15
COPA-202ENST00000368069 LRRFIP1Q32MZ4 808 aaKnown RBP14.1□□□□□ -0.15
COPA-202ENST00000368069 PIK3C2GO75747 1445 aa14.09□□□□□ -0.15
COPA-202ENST00000368069 PLEKHO1Q53GL0 409 aaPredicted RBP14.09□□□□□ -0.15
COPA-202ENST00000368069 CCDC39Q9UFE4 941 aa14.09□□□□□ -0.15
COPA-202ENST00000368069 SMARCA5O60264 1052 aaPredicted RBP14.09□□□□□ -0.15
COPA-202ENST00000368069 MAP4K4O95819 1239 aaPredicted RBP14.09□□□□□ -0.15
COPA-202ENST00000368069 EXOC6BQ9Y2D4 811 aa14.09□□□□□ -0.15
COPA-202ENST00000368069 SPATA31E1Q6ZUB1 1445 aa14.09□□□□□ -0.15
COPA-202ENST00000368069 CARD14Q9BXL6 1004 aa14.08□□□□□ -0.15
COPA-202ENST00000368069 R3HCC1Q9Y3T6 440 aaKnown RBP14.08□□□□□ -0.15
COPA-202ENST00000368069 POLR3AO14802 1390 aaPredicted RBP14.08□□□□□ -0.15
COPA-202ENST00000368069 ANKRD36BQ8N2N9 1353 aa14.08□□□□□ -0.15
COPA-202ENST00000368069 EIF4G3O43432 1585 aaKnown RBP14.08□□□□□ -0.15
COPA-202ENST00000368069 ESCO1Q5FWF5 840 aa14.08□□□□□ -0.16
COPA-202ENST00000368069 NEUROD6Q96NK8 337 aa14.08□□□□□ -0.16
COPA-202ENST00000368069 RNF123Q5XPI4 1314 aa14.08□□□□□ -0.16
COPA-202ENST00000368069 VSIG10Q8N0Z9 540 aa14.08□□□□□ -0.16
COPA-202ENST00000368069 TSPY26PQ9H489 355 aa14.08□□□□□ -0.16
COPA-202ENST00000368069 IL1RAPL2Q9NP60 686 aa14.08□□□□□ -0.16
COPA-202ENST00000368069 TNNQ9UQP3 1299 aa14.08□□□□□ -0.16
COPA-202ENST00000368069 PSMA5P28066 241 aa14.08□□□□□ -0.16
COPA-202ENST00000368069 CPLX1O14810 134 aa14.07□□□□□ -0.16
COPA-202ENST00000368069 FIBPO43427 364 aa14.07□□□□□ -0.16
COPA-202ENST00000368069 IL16Q14005 1332 aa14.07□□□□□ -0.16
COPA-202ENST00000368069 KDM6BO15054 1643 aa14.07□□□□□ -0.16
COPA-202ENST00000368069 SASS6Q6UVJ0 657 aa14.07□□□□□ -0.16
COPA-202ENST00000368069 SPINK5Q9NQ38 1064 aaPredicted RBP14.06□□□□□ -0.16
COPA-202ENST00000368069 WASLO00401 505 aaPredicted RBP14.06□□□□□ -0.16
COPA-202ENST00000368069 ZNF530Q6P9A1 599 aaPredicted RBP14.06□□□□□ -0.16
COPA-202ENST00000368069 CPLX2Q6PUV4 134 aaKnown RBP14.06□□□□□ -0.16
COPA-202ENST00000368069 SRGAP3O43295 1099 aa14.06□□□□□ -0.16
COPA-202ENST00000368069 FBLN1P23142 703 aa14.06□□□□□ -0.16
COPA-202ENST00000368069 EVA1CP58658 441 aa14.05□□□□□ -0.16
COPA-202ENST00000368069 ERC1Q8IUD2 1116 aa14.05□□□□□ -0.16
COPA-202ENST00000368069 ZNF592Q92610 1267 aa14.05□□□□□ -0.16
COPA-202ENST00000368069 APPP05067 770 aa14.05□□□□□ -0.16
COPA-202ENST00000368069 RLBP1P12271 317 aa14.05□□□□□ -0.16
COPA-202ENST00000368069 HDAC1Q13547 482 aaPredicted RBP14.05□□□□□ -0.16
COPA-202ENST00000368069 BMP2KLQ5H9B9 411 aa14.05□□□□□ -0.16
COPA-202ENST00000368069 MBIPQ9NS73 344 aa14.05□□□□□ -0.16
COPA-202ENST00000368069 FYB1O15117 783 aa14.04□□□□□ -0.16
COPA-202ENST00000368069 CREBRFQ8IUR6 639 aa14.04□□□□□ -0.16
COPA-202ENST00000368069 RASSF8Q8NHQ8 419 aa14.04□□□□□ -0.16
COPA-202ENST00000368069 WDR33Q9C0J8 1336 aaKnown RBP14.04□□□□□ -0.16
COPA-202ENST00000368069 CCDC73Q6ZRK6 1079 aa14.04□□□□□ -0.16
COPA-202ENST00000368069 TBC1D9Q6ZT07 1266 aa14.04□□□□□ -0.16
COPA-202ENST00000368069 THEMISQ8N1K5 641 aaPredicted RBP14.04□□□□□ -0.16
COPA-202ENST00000368069 FBXW7Q969H0 707 aa14.04□□□□□ -0.16
COPA-202ENST00000368069 DENND4BO75064 1496 aaPredicted RBP14.04□□□□□ -0.16
COPA-202ENST00000368069 F6X3S4 739 aa14.03□□□□□ -0.16
COPA-202ENST00000368069 TNPO1Q92973 898 aaKnown RBP14.03□□□□□ -0.16
COPA-202ENST00000368069 DNAJC2Q99543 621 aaKnown RBP14.03□□□□□ -0.16
COPA-202ENST00000368069 FAM83GA6ND36 823 aa14.03□□□□□ -0.16
COPA-202ENST00000368069 ESPNB1AK53 854 aa14.03□□□□□ -0.16
COPA-202ENST00000368069 HIP1O00291 1037 aa14.03□□□□□ -0.16
COPA-202ENST00000368069 GNAT3A8MTJ3 354 aa14.03□□□□□ -0.16
COPA-202ENST00000368069 TRDNQ13061 729 aa14.03□□□□□ -0.16
COPA-202ENST00000368069 SYNE3Q6ZMZ3 975 aa14.03□□□□□ -0.16
COPA-202ENST00000368069 CYP46A1Q9Y6A2 500 aa14.03□□□□□ -0.16
COPA-202ENST00000368069 LETM1O95202 739 aaPredicted RBP14.02□□□□□ -0.16
COPA-202ENST00000368069 SSFA2P28290 1259 aa14.02□□□□□ -0.16
COPA-202ENST00000368069 MX1P20591 662 aa14.02□□□□□ -0.16
COPA-202ENST00000368069 GTF2E1P29083 439 aaPredicted RBP14.02□□□□□ -0.16
COPA-202ENST00000368069 NUTM1Q86Y26 1132 aa14.02□□□□□ -0.16
COPA-202ENST00000368069 SIL1Q9H173 461 aa14.02□□□□□ -0.16
COPA-202ENST00000368069 ZMYM4Q5VZL5 1548 aa14.02□□□□□ -0.16
COPA-202ENST00000368069 PDCP20941 246 aa14.02□□□□□ -0.17
COPA-202ENST00000368069 TRIM29Q14134 588 aa14.02□□□□□ -0.17
COPA-202ENST00000368069 WASHC4Q2M389 1173 aa14.02□□□□□ -0.17
COPA-202ENST00000368069 NUCB1Q02818 461 aa14.01□□□□□ -0.17
COPA-202ENST00000368069 CWC27Q6UX04 472 aaKnown RBP14.01□□□□□ -0.17
COPA-202ENST00000368069 ATF3P18847 181 aa14□□□□□ -0.17
COPA-202ENST00000368069 AKAP17AQ02040 695 aaKnown RBP14□□□□□ -0.17
COPA-202ENST00000368069 UPF3BQ9BZI7 483 aaKnown RBP14□□□□□ -0.17
COPA-202ENST00000368069 ADGBQ8N7X0 1667 aa14□□□□□ -0.17
COPA-202ENST00000368069 BLMP54132 1417 aaPredicted RBP14□□□□□ -0.17
COPA-202ENST00000368069 RALYLQ86SE5 291 aaKnown RBP14□□□□□ -0.17
COPA-202ENST00000368069 AACSQ86V21 672 aa14□□□□□ -0.17
COPA-202ENST00000368069 ASXL2Q76L83 1435 aa13.99□□□□□ -0.17
COPA-202ENST00000368069 TPM2P07951 284 aa13.99□□□□□ -0.17
COPA-202ENST00000368069 MAST1Q9Y2H9 1570 aa13.99□□□□□ -0.17
COPA-202ENST00000368069 BTBD11A6QL63 1104 aa13.99□□□□□ -0.17
COPA-202ENST00000368069 NFXL1Q6ZNB6 911 aa13.99□□□□□ -0.17
COPA-202ENST00000368069 MPNDQ8N594 471 aa13.99□□□□□ -0.17
COPA-202ENST00000368069 SEC24BO95487 1268 aa13.99□□□□□ -0.17
COPA-202ENST00000368069 KDM2BQ8NHM5 1336 aa13.99□□□□□ -0.17
COPA-202ENST00000368069 AEBP1Q8IUX7 1158 aa13.98□□□□□ -0.17
COPA-202ENST00000368069 WDR7Q9Y4E6 1490 aa13.98□□□□□ -0.17
COPA-202ENST00000368069 STK3Q13188 491 aa13.98□□□□□ -0.17
COPA-202ENST00000368069 JAKMIP1Q96N16 626 aaKnown RBP13.98□□□□□ -0.17
COPA-202ENST00000368069 NPC1L1Q9UHC9 1359 aa13.98□□□□□ -0.17
COPA-202ENST00000368069 PTPRCP08575 1304 aa13.98□□□□□ -0.17
COPA-202ENST00000368069 ARHGAP45Q92619 1136 aa13.98□□□□□ -0.17
COPA-202ENST00000368069 SYTL4Q96C24 671 aaPredicted RBP13.98□□□□□ -0.17
COPA-202ENST00000368069 DMRT2Q9Y5R5 561 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms