RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 NCOA3Q9Y6Q9 1424 aa12.85□□□□□ -0.35
VTA1-201ENST00000367621 STRCP1A6NGW2 1772 aa12.84□□□□□ -0.35
VTA1-201ENST00000367621 MORC1Q86VD1 984 aa12.84□□□□□ -0.35
VTA1-201ENST00000367621 GGNBP2Q9H3C7 697 aa12.84□□□□□ -0.35
VTA1-201ENST00000367621 C19orf44Q9H6X5 657 aa12.84□□□□□ -0.35
VTA1-201ENST00000367621 NALCNQ8IZF0 1738 aa12.84□□□□□ -0.35
VTA1-201ENST00000367621 ZNF335Q9H4Z2 1342 aaPredicted RBP12.84□□□□□ -0.35
VTA1-201ENST00000367621 PMFBP1Q8TBY8 1022 aa12.83□□□□□ -0.36
VTA1-201ENST00000367621 FMN2Q9NZ56 1722 aa12.82□□□□□ -0.36
VTA1-201ENST00000367621 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.82□□□□□ -0.36
VTA1-201ENST00000367621 TTC21BQ7Z4L5 1316 aa12.82□□□□□ -0.36
VTA1-201ENST00000367621 USP6P35125 1406 aa12.81□□□□□ -0.36
VTA1-201ENST00000367621 NME9Q86XW9 330 aa12.81□□□□□ -0.36
VTA1-201ENST00000367621 FAM9BQ8IZU0 186 aa12.81□□□□□ -0.36
VTA1-201ENST00000367621 LRRC7Q96NW7 1537 aa12.81□□□□□ -0.36
VTA1-201ENST00000367621 C14orf37Q86TY3 774 aa12.8□□□□□ -0.36
VTA1-201ENST00000367621 IFNLR1Q8IU57 520 aaPredicted RBP12.8□□□□□ -0.36
VTA1-201ENST00000367621 TMEM121BQ9BXQ6 578 aaPredicted RBP12.8□□□□□ -0.36
VTA1-201ENST00000367621 PCDHB8Q9UN66 801 aa12.8□□□□□ -0.36
VTA1-201ENST00000367621 PHF8Q9UPP1 1060 aa12.8□□□□□ -0.36
VTA1-201ENST00000367621 TNNT2P45379 298 aaPredicted RBP12.79□□□□□ -0.36
VTA1-201ENST00000367621 ORAI2Q96SN7 254 aa12.79□□□□□ -0.36
VTA1-201ENST00000367621 DCCP43146 1447 aa12.79□□□□□ -0.36
VTA1-201ENST00000367621 C1orf167Q5SNV9 1468 aa12.78□□□□□ -0.36
VTA1-201ENST00000367621 NGDNQ8NEJ9 315 aaKnown RBP12.78□□□□□ -0.36
VTA1-201ENST00000367621 MST1RQ04912 1400 aa12.78□□□□□ -0.36
VTA1-201ENST00000367621 MON2Q7Z3U7 1717 aa12.77□□□□□ -0.36
VTA1-201ENST00000367621 SNPHO15079 494 aa12.77□□□□□ -0.37
VTA1-201ENST00000367621 FBLN1P23142 703 aa12.77□□□□□ -0.37
VTA1-201ENST00000367621 MTHFSP49914 203 aa12.77□□□□□ -0.37
VTA1-201ENST00000367621 ESCO1Q5FWF5 840 aa12.77□□□□□ -0.37
VTA1-201ENST00000367621 NRKQ7Z2Y5 1582 aa12.77□□□□□ -0.37
VTA1-201ENST00000367621 AKAP12Q02952 1782 aa12.76□□□□□ -0.37
VTA1-201ENST00000367621 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.76□□□□□ -0.37
VTA1-201ENST00000367621 TTC21AQ8NDW8 1320 aa12.76□□□□□ -0.37
VTA1-201ENST00000367621 INSRP06213 1382 aa12.76□□□□□ -0.37
VTA1-201ENST00000367621 USP31Q70CQ4 1352 aa12.76□□□□□ -0.37
VTA1-201ENST00000367621 OVOS2A0A0J9YW53 1432 aa12.76□□□□□ -0.37
VTA1-201ENST00000367621 OVOS2Q6IE36 1432 aa12.76□□□□□ -0.37
VTA1-201ENST00000367621 ATF3P18847 181 aa12.75□□□□□ -0.37
VTA1-201ENST00000367621 GSE1Q14687 1217 aa12.75□□□□□ -0.37
VTA1-201ENST00000367621 AATKQ6ZMQ8 1374 aa12.74□□□□□ -0.37
VTA1-201ENST00000367621 PNPLA6Q8IY17 1366 aa12.74□□□□□ -0.37
VTA1-201ENST00000367621 CHRM1P11229 460 aaPredicted RBP12.74□□□□□ -0.37
VTA1-201ENST00000367621 ZNF467Q7Z7K2 595 aaPredicted RBP12.74□□□□□ -0.37
VTA1-201ENST00000367621 CADPS2Q86UW7 1296 aa12.74□□□□□ -0.37
VTA1-201ENST00000367621 COG3Q96JB2 828 aa12.74□□□□□ -0.37
VTA1-201ENST00000367621 POLKQ9UBT6 870 aa12.74□□□□□ -0.37
VTA1-201ENST00000367621 ADAMTS8Q9UP79 889 aa12.74□□□□□ -0.37
VTA1-201ENST00000367621 MSH6P52701 1360 aa12.73□□□□□ -0.37
VTA1-201ENST00000367621 ITSN1Q15811 1721 aa12.73□□□□□ -0.37
VTA1-201ENST00000367621 COL3A1P02461 1466 aaPredicted RBP12.72□□□□□ -0.37
VTA1-201ENST00000367621 RGPD8O14715 1765 aaPredicted RBP12.72□□□□□ -0.37
VTA1-201ENST00000367621 FOXO3O43524 673 aa12.72□□□□□ -0.37
VTA1-201ENST00000367621 HNRNPUQ00839 825 aaKnown RBP eCLIP12.72□□□□□ -0.37
VTA1-201ENST00000367621 BLMP54132 1417 aaPredicted RBP12.71□□□□□ -0.37
VTA1-201ENST00000367621 SMG6Q86US8 1419 aaKnown RBP12.71□□□□□ -0.37
VTA1-201ENST00000367621 PDCD7Q8N8D1 485 aaKnown RBP12.71□□□□□ -0.37
VTA1-201ENST00000367621 XIRP1Q702N8 1843 aaKnown RBP12.71□□□□□ -0.38
VTA1-201ENST00000367621 CENPBP07199 599 aaPredicted RBP12.7□□□□□ -0.38
VTA1-201ENST00000367621 PSME1Q06323 249 aa12.7□□□□□ -0.38
VTA1-201ENST00000367621 EMILIN1Q9Y6C2 1016 aa12.7□□□□□ -0.38
VTA1-201ENST00000367621 ANKRD26Q9UPS8 1709 aa12.7□□□□□ -0.38
VTA1-201ENST00000367621 LTBP4Q8N2S1 1624 aa12.7□□□□□ -0.38
VTA1-201ENST00000367621 KIF20BQ96Q89 1820 aa12.69□□□□□ -0.38
VTA1-201ENST00000367621 BRINP3Q76B58 766 aa12.69□□□□□ -0.38
VTA1-201ENST00000367621 KRT28Q7Z3Y7 464 aa12.69□□□□□ -0.38
VTA1-201ENST00000367621 NLRP6P59044 892 aa12.68□□□□□ -0.38
VTA1-201ENST00000367621 XPCQ01831 940 aaPredicted RBP12.68□□□□□ -0.38
VTA1-201ENST00000367621 RRS1Q15050 365 aaKnown RBP12.68□□□□□ -0.38
VTA1-201ENST00000367621 DDX17Q92841 729 aaKnown RBP12.68□□□□□ -0.38
VTA1-201ENST00000367621 CFAP53Q96M91 514 aa12.68□□□□□ -0.38
VTA1-201ENST00000367621 SLAIN2Q9P270 581 aa12.68□□□□□ -0.38
VTA1-201ENST00000367621 PIK3C2AO00443 1686 aa12.67□□□□□ -0.38
VTA1-201ENST00000367621 ZBED9Q6R2W3 1325 aa12.67□□□□□ -0.38
VTA1-201ENST00000367621 WDR43Q15061 677 aaKnown RBP eCLIP12.67□□□□□ -0.38
VTA1-201ENST00000367621 NUTM2GQ5VZR2 741 aa12.67□□□□□ -0.38
VTA1-201ENST00000367621 ABTB2Q8N961 1025 aa12.67□□□□□ -0.38
VTA1-201ENST00000367621 SENP3-EIF4A1A0A087X0R7 540 aa12.66□□□□□ -0.38
VTA1-201ENST00000367621 IL13P35225 146 aa12.66□□□□□ -0.38
VTA1-201ENST00000367621 KLHL34Q8N239 644 aa12.66□□□□□ -0.38
VTA1-201ENST00000367621 L3MBTL3Q96JM7 780 aaPredicted RBP12.66□□□□□ -0.38
VTA1-201ENST00000367621 SHPRHQ149N8 1683 aa12.65□□□□□ -0.38
VTA1-201ENST00000367621 MKRN3Q13064 507 aaKnown RBP12.65□□□□□ -0.38
VTA1-201ENST00000367621 SBNO1A3KN83 1393 aa12.65□□□□□ -0.38
VTA1-201ENST00000367621 CDK12Q9NYV4 1490 aaPredicted RBP12.65□□□□□ -0.38
VTA1-201ENST00000367621 USP19O94966 1318 aa12.64□□□□□ -0.39
VTA1-201ENST00000367621 MAP3K19Q56UN5 1328 aa12.64□□□□□ -0.39
VTA1-201ENST00000367621 KIF1AQ12756 1690 aa12.64□□□□□ -0.39
VTA1-201ENST00000367621 USP54Q70EL1 1684 aa12.64□□□□□ -0.39
VTA1-201ENST00000367621 DIAPH1O60610 1272 aaKnown RBP12.64□□□□□ -0.39
VTA1-201ENST00000367621 PXDNQ92626 1479 aa12.64□□□□□ -0.39
VTA1-201ENST00000367621 NPHP3Q7Z494 1330 aa12.63□□□□□ -0.39
VTA1-201ENST00000367621 MARF1Q9Y4F3 1742 aaKnown RBP12.63□□□□□ -0.39
VTA1-201ENST00000367621 PPM1GO15355 546 aaPredicted RBP12.63□□□□□ -0.39
VTA1-201ENST00000367621 ILDR1Q86SU0 546 aaPredicted RBP12.63□□□□□ -0.39
VTA1-201ENST00000367621 CCDC146Q8IYE0 955 aa12.63□□□□□ -0.39
VTA1-201ENST00000367621 SOS2Q07890 1332 aaPredicted RBP12.62□□□□□ -0.39
VTA1-201ENST00000367621 TRPM3Q9HCF6 1732 aaPredicted RBP12.62□□□□□ -0.39
VTA1-201ENST00000367621 SOX12O15370 315 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms