RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 BRMS1Q9HCU9 246 aa4.45□□□□□ -1.7
SYNE1-207ENST00000367255 NCAPD3P42695 1498 aa4.45□□□□□ -1.7
SYNE1-207ENST00000367255 CCDC30Q5VVM6 783 aa4.45□□□□□ -1.7
SYNE1-207ENST00000367255 CALR3Q96L12 384 aaKnown RBP4.45□□□□□ -1.7
SYNE1-207ENST00000367255 TTC14Q96N46 770 aa4.45□□□□□ -1.7
SYNE1-207ENST00000367255 SMC2O95347 1197 aa4.45□□□□□ -1.7
SYNE1-207ENST00000367255 GOLGA6L19H0YKK7 550 aa4.45□□□□□ -1.7
SYNE1-207ENST00000367255 SH2B1Q9NRF2 756 aaPredicted RBP4.45□□□□□ -1.7
SYNE1-207ENST00000367255 NUP160Q12769 1436 aa4.45□□□□□ -1.7
SYNE1-207ENST00000367255 PPP1R15AO75807 674 aaPredicted RBP4.45□□□□□ -1.7
SYNE1-207ENST00000367255 POTEDQ86YR6 584 aa4.45□□□□□ -1.7
SYNE1-207ENST00000367255 PHAXQ9H814 394 aaKnown RBP4.45□□□□□ -1.7
SYNE1-207ENST00000367255 PATL2C9JE40 543 aaKnown RBP4.45□□□□□ -1.7
SYNE1-207ENST00000367255 CCDC114Q96M63 670 aa4.44□□□□□ -1.7
SYNE1-207ENST00000367255 GOLIM4O00461 696 aa4.44□□□□□ -1.7
SYNE1-207ENST00000367255 TERF2IPQ9NYB0 399 aa4.44□□□□□ -1.7
SYNE1-207ENST00000367255 CNGA1P29973 690 aa4.44□□□□□ -1.7
SYNE1-207ENST00000367255 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.44□□□□□ -1.72e-6■■■■■ 47.6
SYNE1-207ENST00000367255 CDCA7LQ96GN5 454 aa4.44□□□□□ -1.7
SYNE1-207ENST00000367255 PPP1R2P41236 205 aa4.44□□□□□ -1.7
SYNE1-207ENST00000367255 ZKSCAN1P17029 563 aaPredicted RBP4.44□□□□□ -1.7
SYNE1-207ENST00000367255 NASPP49321 788 aaPredicted RBP4.44□□□□□ -1.7
SYNE1-207ENST00000367255 GOLGA2Q08379 1002 aa4.44□□□□□ -1.7
SYNE1-207ENST00000367255 TIGD1Q96MW7 591 aa4.44□□□□□ -1.7
SYNE1-207ENST00000367255 CFAP45Q9UL16 551 aa4.44□□□□□ -1.7
SYNE1-207ENST00000367255 CEP83Q9Y592 693 aa4.44□□□□□ -1.7
SYNE1-207ENST00000367255 CCDC91Q7Z6B0 441 aa4.44□□□□□ -1.7
SYNE1-207ENST00000367255 FYCO1Q9BQS8 1478 aa4.44□□□□□ -1.7
SYNE1-207ENST00000367255 TTC12Q9H892 705 aaPredicted RBP4.44□□□□□ -1.7
SYNE1-207ENST00000367255 DDX19BQ9UMR2 479 aa4.44□□□□□ -1.7
SYNE1-207ENST00000367255 KRT32Q14532 448 aa4.44□□□□□ -1.7
SYNE1-207ENST00000367255 WDR66Q8TBY9 1149 aa4.44□□□□□ -1.7
SYNE1-207ENST00000367255 ZNF592Q92610 1267 aa4.44□□□□□ -1.7
SYNE1-207ENST00000367255 SCAND2PQ9GZW5 306 aaPredicted RBP4.44□□□□□ -1.7
SYNE1-207ENST00000367255 GPRASP1Q5JY77 1395 aa4.44□□□□□ -1.7
SYNE1-207ENST00000367255 CECR2Q9BXF3 1484 aa4.44□□□□□ -1.7
SYNE1-207ENST00000367255 GCC1Q96CN9 775 aa4.44□□□□□ -1.7
SYNE1-207ENST00000367255 SMARCC1Q92922 1105 aaPredicted RBP4.44□□□□□ -1.7
SYNE1-207ENST00000367255 CRBNQ96SW2 442 aa4.44□□□□□ -1.7
SYNE1-207ENST00000367255 CARMIL2Q6F5E8 1435 aa4.44□□□□□ -1.7
SYNE1-207ENST00000367255 LZICQ8WZA0 190 aa4.44□□□□□ -1.7
SYNE1-207ENST00000367255 DTNBP1Q96EV8 351 aa4.44□□□□□ -1.7
SYNE1-207ENST00000367255 KIF3CO14782 793 aa4.44□□□□□ -1.7
SYNE1-207ENST00000367255 PDILTQ8N807 584 aa4.44□□□□□ -1.7
SYNE1-207ENST00000367255 ESPNB1AK53 854 aa4.44□□□□□ -1.7
SYNE1-207ENST00000367255 DDX54Q8TDD1 881 aaKnown RBP4.44□□□□□ -1.7
SYNE1-207ENST00000367255 SEC62Q99442 399 aaKnown RBP4.44□□□□□ -1.7
SYNE1-207ENST00000367255 NECTIN2Q92692 538 aa4.44□□□□□ -1.7
SYNE1-207ENST00000367255 BBXQ8WY36 941 aaPredicted RBP4.43□□□□□ -1.7
SYNE1-207ENST00000367255 CBFA2T2O43439 604 aa4.43□□□□□ -1.7
SYNE1-207ENST00000367255 NUTM2GQ5VZR2 741 aa4.43□□□□□ -1.7
SYNE1-207ENST00000367255 INTS4Q96HW7 963 aaKnown RBP4.43□□□□□ -1.7
SYNE1-207ENST00000367255 APBA1Q02410 837 aa4.43□□□□□ -1.7
SYNE1-207ENST00000367255 KIF18AQ8NI77 898 aa4.43□□□□□ -1.7
SYNE1-207ENST00000367255 DYTNA2CJ06 578 aa4.43□□□□□ -1.7
SYNE1-207ENST00000367255 PLEKHD1A6NEE1 506 aa4.43□□□□□ -1.7
SYNE1-207ENST00000367255 UHRF1BP1LA0JNW5 1464 aa4.43□□□□□ -1.7
SYNE1-207ENST00000367255 MRPS25P82663 173 aaKnown RBP4.43□□□□□ -1.7
SYNE1-207ENST00000367255 API5Q9BZZ5 524 aaKnown RBP4.43□□□□□ -1.7
SYNE1-207ENST00000367255 CCAR2Q8N163 923 aaKnown RBP4.43□□□□□ -1.7
SYNE1-207ENST00000367255 SLC8A1P32418 973 aa4.43□□□□□ -1.7
SYNE1-207ENST00000367255 WASHC4Q2M389 1173 aa4.43□□□□□ -1.7
SYNE1-207ENST00000367255 DZIP1LQ8IYY4 767 aaKnown RBP4.43□□□□□ -1.7
SYNE1-207ENST00000367255 NKTRP30414 1462 aaKnown RBP4.43□□□□□ -1.7
SYNE1-207ENST00000367255 CCDC94Q9BW85 323 aaPredicted RBP4.43□□□□□ -1.7
SYNE1-207ENST00000367255 EFCC1Q9HA90 598 aa4.43□□□□□ -1.7
SYNE1-207ENST00000367255 NMIQ13287 307 aaPredicted RBP4.43□□□□□ -1.7
SYNE1-207ENST00000367255 STK31Q9BXU1 1019 aa4.43□□□□□ -1.7
SYNE1-207ENST00000367255 TMX1Q9H3N1 280 aa4.43□□□□□ -1.7
SYNE1-207ENST00000367255 TRIM6-TRIM34B2RNG4 842 aa4.43□□□□□ -1.7
SYNE1-207ENST00000367255 POP5Q969H6 163 aaKnown RBP4.43□□□□□ -1.7
SYNE1-207ENST00000367255 MPHOSPH6Q99547 160 aaKnown RBP4.42□□□□□ -1.7
SYNE1-207ENST00000367255 KIAA0754O94854 1291 aa4.42□□□□□ -1.7
SYNE1-207ENST00000367255 IMMTQ16891 758 aaKnown RBP4.42□□□□□ -1.7
SYNE1-207ENST00000367255 ZBTB17Q13105 803 aa4.42□□□□□ -1.7
SYNE1-207ENST00000367255 ILF2Q12905 390 aaKnown RBP4.42□□□□□ -1.7
SYNE1-207ENST00000367255 KRT222Q8N1A0 295 aa4.42□□□□□ -1.7
SYNE1-207ENST00000367255 NBPF1Q3BBV0 1214 aa4.42□□□□□ -1.7
SYNE1-207ENST00000367255 RTF1Q92541 710 aaKnown RBP4.42□□□□□ -1.7
SYNE1-207ENST00000367255 SLFNL1Q499Z3 407 aa4.42□□□□□ -1.7
SYNE1-207ENST00000367255 KIRREL3Q8IZU9 778 aa4.42□□□□□ -1.7
SYNE1-207ENST00000367255 ZNF830Q96NB3 372 aaPredicted RBP4.42□□□□□ -1.7
SYNE1-207ENST00000367255 MRVI1Q9Y6F6 885 aa4.42□□□□□ -1.7
SYNE1-207ENST00000367255 FRAT2O75474 233 aaPredicted RBP4.42□□□□□ -1.7
SYNE1-207ENST00000367255 SNAPC5O75971 98 aa4.42□□□□□ -1.7
SYNE1-207ENST00000367255 FILIP1Q7Z7B0 1213 aa4.42□□□□□ -1.7
SYNE1-207ENST00000367255 DYDC1Q8WWB3 177 aa4.42□□□□□ -1.7
SYNE1-207ENST00000367255 FILIP1LQ4L180 1135 aa4.42□□□□□ -1.7
SYNE1-207ENST00000367255 GBP6Q6ZN66 633 aa4.42□□□□□ -1.7
SYNE1-207ENST00000367255 BCL2L13Q9BXK5 485 aa4.42□□□□□ -1.7
SYNE1-207ENST00000367255 LMNB1P20700 586 aa4.42□□□□□ -1.7
SYNE1-207ENST00000367255 SPDYE4A6NLX3 237 aa4.42□□□□□ -1.7
SYNE1-207ENST00000367255 ANKS4BQ8N8V4 417 aa4.42□□□□□ -1.7
SYNE1-207ENST00000367255 STK26Q9P289 416 aa4.42□□□□□ -1.7
SYNE1-207ENST00000367255 WDR63Q8IWG1 891 aa4.42□□□□□ -1.7
SYNE1-207ENST00000367255 CCDC47Q96A33 483 aaKnown RBP4.42□□□□□ -1.7
SYNE1-207ENST00000367255 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.42□□□□□ -1.7
SYNE1-207ENST00000367255 ERC1Q8IUD2 1116 aa4.42□□□□□ -1.7
SYNE1-207ENST00000367255 SMARCE1Q969G3 411 aa4.42□□□□□ -1.7
SYNE1-207ENST00000367255 LTV1Q96GA3 475 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms