RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 MAP7D2Q96T17 732 aa13.73□□□□□ -0.21
RD3-201ENST00000367002 CUL7Q14999 1698 aa13.73□□□□□ -0.21
RD3-201ENST00000367002 ZNF530Q6P9A1 599 aaPredicted RBP13.73□□□□□ -0.21
RD3-201ENST00000367002 SIL1Q9H173 461 aa13.73□□□□□ -0.21
RD3-201ENST00000367002 HOOK1Q9UJC3 728 aaKnown RBP13.73□□□□□ -0.21
RD3-201ENST00000367002 GPRASP1Q5JY77 1395 aa13.73□□□□□ -0.21
RD3-201ENST00000367002 ABCC11Q96J66 1382 aa13.73□□□□□ -0.21
RD3-201ENST00000367002 CEBPZQ03701 1054 aaKnown RBP13.73□□□□□ -0.21
RD3-201ENST00000367002 SMARCA5O60264 1052 aaPredicted RBP13.72□□□□□ -0.21
RD3-201ENST00000367002 RBM10P98175 930 aaKnown RBP13.72□□□□□ -0.21
RD3-201ENST00000367002 SPC24Q8NBT2 197 aa13.72□□□□□ -0.21
RD3-201ENST00000367002 PCDHB15Q9Y5E8 787 aa13.72□□□□□ -0.21
RD3-201ENST00000367002 EMILIN1Q9Y6C2 1016 aa13.72□□□□□ -0.21
RD3-201ENST00000367002 LARP1BQ659C4 914 aaKnown RBP13.72□□□□□ -0.21
RD3-201ENST00000367002 TMX4Q9H1E5 349 aaPredicted RBP13.72□□□□□ -0.21
RD3-201ENST00000367002 IPO7O95373 1038 aaKnown RBP13.71□□□□□ -0.21
RD3-201ENST00000367002 HMGN5P82970 282 aaKnown RBP13.71□□□□□ -0.21
RD3-201ENST00000367002 IDI1Q13907 227 aa13.71□□□□□ -0.21
RD3-201ENST00000367002 CWC27Q6UX04 472 aaKnown RBP13.71□□□□□ -0.21
RD3-201ENST00000367002 NAT10Q9H0A0 1025 aaKnown RBP13.71□□□□□ -0.21
RD3-201ENST00000367002 MTERF4Q7Z6M4 381 aaKnown RBP13.71□□□□□ -0.21
RD3-201ENST00000367002 A0A0U1RQG5 324 aaPredicted RBP13.71□□□□□ -0.22
RD3-201ENST00000367002 KRT85P78386 507 aa13.71□□□□□ -0.22
RD3-201ENST00000367002 STK3Q13188 491 aa13.71□□□□□ -0.22
RD3-201ENST00000367002 NME9Q86XW9 330 aa13.71□□□□□ -0.22
RD3-201ENST00000367002 TBC1D32Q96NH3 1257 aa13.71□□□□□ -0.22
RD3-201ENST00000367002 ERICH2A1L162 156 aa13.7□□□□□ -0.22
RD3-201ENST00000367002 VPS37DQ86XT2 251 aa13.7□□□□□ -0.22
RD3-201ENST00000367002 ANKRD20A12PQ8NF67 263 aa13.7□□□□□ -0.22
RD3-201ENST00000367002 GPATCH8Q9UKJ3 1502 aaKnown RBP13.7□□□□□ -0.22
RD3-201ENST00000367002 BIVM-ERCC5R4GMW8 1640 aa13.7□□□□□ -0.22
RD3-201ENST00000367002 SCAF11Q99590 1463 aaKnown RBP13.7□□□□□ -0.22
RD3-201ENST00000367002 CCDC192P0DO97 292 aa13.7□□□□□ -0.22
RD3-201ENST00000367002 G3V3G9 751 aa13.7□□□□□ -0.22
RD3-201ENST00000367002 ATF3P18847 181 aa13.7□□□□□ -0.22
RD3-201ENST00000367002 DCAF8Q5TAQ9 597 aa13.7□□□□□ -0.22
RD3-201ENST00000367002 GRIN2AQ12879 1464 aa13.69□□□□□ -0.22
RD3-201ENST00000367002 GPS2Q13227 327 aa13.69□□□□□ -0.22
RD3-201ENST00000367002 BLOC1S2Q6QNY1 142 aa13.69□□□□□ -0.22
RD3-201ENST00000367002 MNS1Q8NEH6 495 aa13.69□□□□□ -0.22
RD3-201ENST00000367002 TNPO1Q92973 898 aaKnown RBP13.69□□□□□ -0.22
RD3-201ENST00000367002 ZNF608Q9ULD9 1512 aaPredicted RBP13.69□□□□□ -0.22
RD3-201ENST00000367002 SYCE3A1L190 88 aa13.69□□□□□ -0.22
RD3-201ENST00000367002 F6X3S4 739 aa13.69□□□□□ -0.22
RD3-201ENST00000367002 ATP2B1P20020 1258 aa13.69□□□□□ -0.22
RD3-201ENST00000367002 JAKMIP1Q96N16 626 aaKnown RBP13.69□□□□□ -0.22
RD3-201ENST00000367002 SSFA2P28290 1259 aa13.68□□□□□ -0.22
RD3-201ENST00000367002 NUTM1Q86Y26 1132 aa13.68□□□□□ -0.22
RD3-201ENST00000367002 THOC2Q8NI27 1593 aaKnown RBP13.68□□□□□ -0.22
RD3-201ENST00000367002 URB2Q14146 1524 aaKnown RBP13.68□□□□□ -0.22
RD3-201ENST00000367002 KDM4AO75164 1064 aa13.68□□□□□ -0.22
RD3-201ENST00000367002 AACSQ86V21 672 aa13.68□□□□□ -0.22
RD3-201ENST00000367002 ZSCAN30Q86W11 494 aa13.68□□□□□ -0.22
RD3-201ENST00000367002 AEBP1Q8IUX7 1158 aa13.68□□□□□ -0.22
RD3-201ENST00000367002 BMP2KLQ5H9B9 411 aa13.68□□□□□ -0.22
RD3-201ENST00000367002 VPS53Q5VIR6 699 aa13.68□□□□□ -0.22
RD3-201ENST00000367002 TESK2Q96S53 571 aa13.68□□□□□ -0.22
RD3-201ENST00000367002 PARD3Q8TEW0 1356 aa13.68□□□□□ -0.22
RD3-201ENST00000367002 MX1P20591 662 aa13.67□□□□□ -0.22
RD3-201ENST00000367002 PCMTD1Q96MG8 357 aaPredicted RBP13.67□□□□□ -0.22
RD3-201ENST00000367002 C14orf93Q9H972 538 aaKnown RBP13.67□□□□□ -0.22
RD3-201ENST00000367002 ANKRD1Q15327 319 aa13.67□□□□□ -0.22
RD3-201ENST00000367002 TNMDQ9H2S6 317 aa13.67□□□□□ -0.22
RD3-201ENST00000367002 STK38Q15208 465 aa13.67□□□□□ -0.22
RD3-201ENST00000367002 THEMISQ8N1K5 641 aaPredicted RBP13.67□□□□□ -0.22
RD3-201ENST00000367002 TBC1D9Q6ZT07 1266 aa13.66□□□□□ -0.22
RD3-201ENST00000367002 PDE4CQ08493 712 aa13.66□□□□□ -0.22
RD3-201ENST00000367002 PDRG1Q9NUG6 133 aa13.66□□□□□ -0.22
RD3-201ENST00000367002 MYL6BP14649 208 aa13.66□□□□□ -0.22
RD3-201ENST00000367002 OLFM4Q6UX06 510 aa13.66□□□□□ -0.22
RD3-201ENST00000367002 PER1O15534 1290 aaPredicted RBP13.65□□□□□ -0.22
RD3-201ENST00000367002 DHX16O60231 1041 aaKnown RBP13.65□□□□□ -0.22
RD3-201ENST00000367002 FERMT3Q86UX7 667 aa13.65□□□□□ -0.22
RD3-201ENST00000367002 GNAT3A8MTJ3 354 aa13.65□□□□□ -0.22
RD3-201ENST00000367002 FBLN1P23142 703 aa13.65□□□□□ -0.22
RD3-201ENST00000367002 C8orf34Q49A92 452 aa13.65□□□□□ -0.22
RD3-201ENST00000367002 PDILTQ8N807 584 aa13.65□□□□□ -0.22
RD3-201ENST00000367002 KIF1BPQ96EK5 621 aa13.65□□□□□ -0.22
RD3-201ENST00000367002 LAMC3Q9Y6N6 1575 aa13.65□□□□□ -0.22
RD3-201ENST00000367002 SMC2O95347 1197 aa13.65□□□□□ -0.22
RD3-201ENST00000367002 ME1P48163 572 aa13.65□□□□□ -0.22
RD3-201ENST00000367002 CCDC47Q96A33 483 aaKnown RBP13.65□□□□□ -0.22
RD3-201ENST00000367002 ARGLU1Q9NWB6 273 aaPredicted RBP13.65□□□□□ -0.22
RD3-201ENST00000367002 ZNF396Q96N95 335 aaPredicted RBP13.64□□□□□ -0.23
RD3-201ENST00000367002 RALGAPBQ86X10 1494 aa13.64□□□□□ -0.23
RD3-201ENST00000367002 TATP17735 454 aaPredicted RBP13.64□□□□□ -0.23
RD3-201ENST00000367002 ZSCAN31Q96LW9 406 aaPredicted RBP13.64□□□□□ -0.23
RD3-201ENST00000367002 UGGT2Q9NYU1 1516 aa13.64□□□□□ -0.23
RD3-201ENST00000367002 AMOTL1Q8IY63 956 aa13.64□□□□□ -0.23
RD3-201ENST00000367002 TBC1D2BQ9UPU7 963 aa13.64□□□□□ -0.23
RD3-201ENST00000367002 NOS1P29475 1434 aa13.64□□□□□ -0.23
RD3-201ENST00000367002 BTBD11A6QL63 1104 aa13.64□□□□□ -0.23
RD3-201ENST00000367002 CASTP20810 708 aaKnown RBP13.64□□□□□ -0.23
RD3-201ENST00000367002 FBXO31Q5XUX0 539 aaPredicted RBP13.64□□□□□ -0.23
RD3-201ENST00000367002 CCDC70Q6NSX1 233 aa13.64□□□□□ -0.23
RD3-201ENST00000367002 GLRX3O76003 335 aaKnown RBP13.63□□□□□ -0.23
RD3-201ENST00000367002 TEX35Q5T0J7 233 aa13.63□□□□□ -0.23
RD3-201ENST00000367002 NOL10Q9BSC4 688 aaKnown RBP13.63□□□□□ -0.23
RD3-201ENST00000367002 PROSER2Q86WR7 435 aaPredicted RBP13.63□□□□□ -0.23
RD3-201ENST00000367002 SPATA32Q96LK8 384 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms