RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 MARF1Q9Y4F3 1742 aaKnown RBP14.31□□□□□ -0.12
H3F3A-202ENST00000366814 TNNT2P45379 298 aaPredicted RBP14.31□□□□□ -0.12
H3F3A-202ENST00000366814 ACEP12821 1306 aa14.31□□□□□ -0.12
H3F3A-202ENST00000366814 FNBP4Q8N3X1 1017 aaPredicted RBP14.31□□□□□ -0.12
H3F3A-202ENST00000366814 PLEKHG3A1L390 1219 aa14.3□□□□□ -0.12
H3F3A-202ENST00000366814 KIF20BQ96Q89 1820 aa14.29□□□□□ -0.12
H3F3A-202ENST00000366814 TRPM3Q9HCF6 1732 aaPredicted RBP14.29□□□□□ -0.12
H3F3A-202ENST00000366814 RBM6P78332 1123 aaKnown RBP14.29□□□□□ -0.12
H3F3A-202ENST00000366814 GOLGA2Q08379 1002 aa14.29□□□□□ -0.12
H3F3A-202ENST00000366814 TRPC5Q9UL62 973 aaPredicted RBP14.29□□□□□ -0.12
H3F3A-202ENST00000366814 CAPN15O75808 1086 aa14.29□□□□□ -0.12
H3F3A-202ENST00000366814 MTHFSP49914 203 aa14.29□□□□□ -0.12
H3F3A-202ENST00000366814 CD163L1Q9NR16 1453 aa14.28□□□□□ -0.12
H3F3A-202ENST00000366814 RRP1P56182 461 aaKnown RBP14.28□□□□□ -0.12
H3F3A-202ENST00000366814 CDCA7LQ96GN5 454 aa14.28□□□□□ -0.12
H3F3A-202ENST00000366814 CABP1Q9NZU7 370 aa14.28□□□□□ -0.12
H3F3A-202ENST00000366814 PPIP5K1Q6PFW1 1433 aa14.28□□□□□ -0.12
H3F3A-202ENST00000366814 TOPAZ1Q8N9V7 1692 aa14.28□□□□□ -0.12
H3F3A-202ENST00000366814 POLA2Q14181 598 aa14.27□□□□□ -0.12
H3F3A-202ENST00000366814 CCDC146Q8IYE0 955 aa14.27□□□□□ -0.12
H3F3A-202ENST00000366814 ALS2Q96Q42 1657 aa14.27□□□□□ -0.13
H3F3A-202ENST00000366814 APAF1O14727 1248 aa14.26□□□□□ -0.13
H3F3A-202ENST00000366814 NUTM2GQ5VZR2 741 aa14.26□□□□□ -0.13
H3F3A-202ENST00000366814 ZNF521Q96K83 1311 aa14.26□□□□□ -0.13
H3F3A-202ENST00000366814 GGNBP2Q9H3C7 697 aa14.25□□□□□ -0.13
H3F3A-202ENST00000366814 FYB1O15117 783 aa14.25□□□□□ -0.13
H3F3A-202ENST00000366814 C1QBPQ07021 282 aaKnown RBP14.25□□□□□ -0.13
H3F3A-202ENST00000366814 UNC5CLQ8IV45 518 aa14.25□□□□□ -0.13
H3F3A-202ENST00000366814 ABTB2Q8N961 1025 aa14.25□□□□□ -0.13
H3F3A-202ENST00000366814 RUNDC1Q96C34 613 aa14.25□□□□□ -0.13
H3F3A-202ENST00000366814 BCL9LQ86UU0 1499 aa14.24□□□□□ -0.13
H3F3A-202ENST00000366814 FAM83GA6ND36 823 aa14.24□□□□□ -0.13
H3F3A-202ENST00000366814 ABCA3Q99758 1704 aa14.24□□□□□ -0.13
H3F3A-202ENST00000366814 EDC4Q6P2E9 1401 aaKnown RBP14.23□□□□□ -0.13
H3F3A-202ENST00000366814 CDK12Q9NYV4 1490 aaPredicted RBP14.23□□□□□ -0.13
H3F3A-202ENST00000366814 E9PSI1 815 aa14.23□□□□□ -0.13
H3F3A-202ENST00000366814 ATRNO75882 1429 aa14.22□□□□□ -0.13
H3F3A-202ENST00000366814 SLIT2O94813 1529 aa14.22□□□□□ -0.13
H3F3A-202ENST00000366814 DUSP27Q5VZP5 1158 aa14.22□□□□□ -0.13
H3F3A-202ENST00000366814 B4GALNT3Q6L9W6 998 aa14.22□□□□□ -0.13
H3F3A-202ENST00000366814 CCDC136Q96JN2 1154 aa14.22□□□□□ -0.13
H3F3A-202ENST00000366814 GJD4Q96KN9 370 aaPredicted RBP14.22□□□□□ -0.13
H3F3A-202ENST00000366814 SLFN5Q08AF3 891 aa14.21□□□□□ -0.13
H3F3A-202ENST00000366814 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.21□□□□□ -0.13
H3F3A-202ENST00000366814 TSHZ2Q9NRE2 1034 aa14.21□□□□□ -0.13
H3F3A-202ENST00000366814 CCDC9Q9Y3X0 531 aaKnown RBP14.21□□□□□ -0.13
H3F3A-202ENST00000366814 CPSF1Q10570 1443 aaKnown RBP14.21□□□□□ -0.14
H3F3A-202ENST00000366814 ZNF692Q9BU19 519 aaPredicted RBP14.21□□□□□ -0.14
H3F3A-202ENST00000366814 MON2Q7Z3U7 1717 aa14.2□□□□□ -0.14
H3F3A-202ENST00000366814 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.2□□□□□ -0.14
H3F3A-202ENST00000366814 U2AF1L5P0DN76 240 aaPredicted RBP14.2□□□□□ -0.14
H3F3A-202ENST00000366814 U2AF1Q01081 240 aaKnown RBP eCLIP14.2□□□□□ -0.14
H3F3A-202ENST00000366814 PNNQ9H307 717 aaKnown RBP14.2□□□□□ -0.14
H3F3A-202ENST00000366814 PRDM11Q9NQV5 511 aa14.2□□□□□ -0.14
H3F3A-202ENST00000366814 BTG4Q9NY30 223 aa14.2□□□□□ -0.14
H3F3A-202ENST00000366814 RGS12O14924 1447 aa14.19□□□□□ -0.14
H3F3A-202ENST00000366814 PLCH1Q4KWH8 1693 aa14.19□□□□□ -0.14
H3F3A-202ENST00000366814 ZC3H6P61129 1189 aaKnown RBP14.19□□□□□ -0.14
H3F3A-202ENST00000366814 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.19□□□□□ -0.14
H3F3A-202ENST00000366814 AKAP12Q02952 1782 aa14.19□□□□□ -0.14
H3F3A-202ENST00000366814 NWD2Q9ULI1 1742 aa14.18□□□□□ -0.14
H3F3A-202ENST00000366814 USP6P35125 1406 aa14.18□□□□□ -0.14
H3F3A-202ENST00000366814 CRYBG1Q9Y4K1 1723 aa14.18□□□□□ -0.14
H3F3A-202ENST00000366814 NLRP6P59044 892 aa14.18□□□□□ -0.14
H3F3A-202ENST00000366814 VPS72Q15906 364 aa14.18□□□□□ -0.14
H3F3A-202ENST00000366814 TRMT2AQ8IZ69 625 aaKnown RBP14.18□□□□□ -0.14
H3F3A-202ENST00000366814 TCP11L2Q8N4U5 519 aa14.18□□□□□ -0.14
H3F3A-202ENST00000366814 COL14A1Q05707 1796 aaKnown RBP14.17□□□□□ -0.14
H3F3A-202ENST00000366814 SPDYE4A6NLX3 237 aa14.17□□□□□ -0.14
H3F3A-202ENST00000366814 CCDC27Q2M243 656 aa14.17□□□□□ -0.14
H3F3A-202ENST00000366814 WWC1Q8IX03 1113 aa14.17□□□□□ -0.14
H3F3A-202ENST00000366814 COL3A1P02461 1466 aaPredicted RBP14.17□□□□□ -0.14
H3F3A-202ENST00000366814 U2SURPO15042 1029 aaKnown RBP14.16□□□□□ -0.14
H3F3A-202ENST00000366814 DIAPH1O60610 1272 aaKnown RBP14.16□□□□□ -0.14
H3F3A-202ENST00000366814 CHRNA2Q15822 529 aa14.16□□□□□ -0.14
H3F3A-202ENST00000366814 KIAA0232Q92628 1395 aa14.16□□□□□ -0.14
H3F3A-202ENST00000366814 PHRF1Q9P1Y6 1649 aaKnown RBP14.16□□□□□ -0.14
H3F3A-202ENST00000366814 MAPK8IP3Q9UPT6 1336 aa14.16□□□□□ -0.14
H3F3A-202ENST00000366814 WDR63Q8IWG1 891 aa14.16□□□□□ -0.14
H3F3A-202ENST00000366814 UPF1Q92900 1129 aaKnown RBP eCLIP14.16□□□□□ -0.14
H3F3A-202ENST00000366814 COG3Q96JB2 828 aa14.16□□□□□ -0.14
H3F3A-202ENST00000366814 ABCB7O75027 752 aa14.15□□□□□ -0.14
H3F3A-202ENST00000366814 GCP02774 474 aa14.15□□□□□ -0.14
H3F3A-202ENST00000366814 TTC21BQ7Z4L5 1316 aa14.15□□□□□ -0.14
H3F3A-202ENST00000366814 ZBTB7CA1YPR0 619 aa14.14□□□□□ -0.15
H3F3A-202ENST00000366814 NEFMP07197 916 aa14.14□□□□□ -0.15
H3F3A-202ENST00000366814 NEUROD2Q15784 382 aa14.14□□□□□ -0.15
H3F3A-202ENST00000366814 EVA1CP58658 441 aa14.14□□□□□ -0.15
H3F3A-202ENST00000366814 STRN4Q9NRL3 753 aa14.14□□□□□ -0.15
H3F3A-202ENST00000366814 USP19O94966 1318 aa14.13□□□□□ -0.15
H3F3A-202ENST00000366814 GLI3P10071 1580 aa14.13□□□□□ -0.15
H3F3A-202ENST00000366814 AATKQ6ZMQ8 1374 aa14.13□□□□□ -0.15
H3F3A-202ENST00000366814 A0A0G2JS52 829 aa14.13□□□□□ -0.15
H3F3A-202ENST00000366814 MYT1Q01538 1121 aa14.13□□□□□ -0.15
H3F3A-202ENST00000366814 EXOC6Q8TAG9 804 aa14.13□□□□□ -0.15
H3F3A-202ENST00000366814 MAP2P11137 1827 aaKnown RBP14.13□□□□□ -0.15
H3F3A-202ENST00000366814 SSH2Q76I76 1423 aa14.13□□□□□ -0.15
H3F3A-202ENST00000366814 TTC21AQ8NDW8 1320 aa14.13□□□□□ -0.15
H3F3A-202ENST00000366814 NRAPQ86VF7 1730 aa14.12□□□□□ -0.15
H3F3A-202ENST00000366814 SEPT12Q8IYM1 358 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms