RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 SURF6O75683 361 aaKnown RBP14.37□□□□□ -0.11
CDC42BPA-203ENST00000366766 ZSCAN31Q96LW9 406 aaPredicted RBP14.36□□□□□ -0.11
CDC42BPA-203ENST00000366766 CYP46A1Q9Y6A2 500 aa14.36□□□□□ -0.11
CDC42BPA-203ENST00000366766 PPP6R1Q9UPN7 881 aa14.36□□□□□ -0.11
CDC42BPA-203ENST00000366766 ABTB2Q8N961 1025 aa14.36□□□□□ -0.11
CDC42BPA-203ENST00000366766 NOM1Q5C9Z4 860 aaKnown RBP14.36□□□□□ -0.11
CDC42BPA-203ENST00000366766 CDK19Q9BWU1 502 aa14.36□□□□□ -0.11
CDC42BPA-203ENST00000366766 ASXL1Q8IXJ9 1541 aa14.36□□□□□ -0.11
CDC42BPA-203ENST00000366766 GCC2Q8IWJ2 1684 aa14.36□□□□□ -0.11
CDC42BPA-203ENST00000366766 TXLNAP40222 546 aa14.35□□□□□ -0.11
CDC42BPA-203ENST00000366766 MNS1Q8NEH6 495 aa14.35□□□□□ -0.11
CDC42BPA-203ENST00000366766 MYO6Q9UM54 1294 aa14.35□□□□□ -0.11
CDC42BPA-203ENST00000366766 CDKL5O76039 1030 aa14.35□□□□□ -0.11
CDC42BPA-203ENST00000366766 NFE2L2Q16236 605 aa14.35□□□□□ -0.11
CDC42BPA-203ENST00000366766 HDGFL1Q5TGJ6 251 aa14.35□□□□□ -0.11
CDC42BPA-203ENST00000366766 VPS53Q5VIR6 699 aa14.34□□□□□ -0.11
CDC42BPA-203ENST00000366766 CFAP45Q9UL16 551 aa14.34□□□□□ -0.11
CDC42BPA-203ENST00000366766 CCAR2Q8N163 923 aaKnown RBP14.34□□□□□ -0.11
CDC42BPA-203ENST00000366766 KRT85P78386 507 aa14.34□□□□□ -0.11
CDC42BPA-203ENST00000366766 PBRM1Q86U86 1689 aa14.34□□□□□ -0.11
CDC42BPA-203ENST00000366766 ZSCAN25Q6NSZ9 544 aa14.34□□□□□ -0.11
CDC42BPA-203ENST00000366766 SLC12A5Q9H2X9 1139 aa14.34□□□□□ -0.11
CDC42BPA-203ENST00000366766 IL16Q14005 1332 aa14.34□□□□□ -0.11
CDC42BPA-203ENST00000366766 GNL3LQ9NVN8 582 aaKnown RBP14.34□□□□□ -0.11
CDC42BPA-203ENST00000366766 CWC15Q9P013 229 aaKnown RBP14.34□□□□□ -0.11
CDC42BPA-203ENST00000366766 KIF6Q6ZMV9 814 aa14.33□□□□□ -0.11
CDC42BPA-203ENST00000366766 CCDC61Q9Y6R9 512 aa14.33□□□□□ -0.11
CDC42BPA-203ENST00000366766 DACH1Q9UI36 760 aa14.33□□□□□ -0.12
CDC42BPA-203ENST00000366766 DNMT1P26358 1616 aaKnown RBP14.33□□□□□ -0.12
CDC42BPA-203ENST00000366766 RAB11FIP3O75154 756 aa14.33□□□□□ -0.12
CDC42BPA-203ENST00000366766 SMARCE1Q969G3 411 aa14.33□□□□□ -0.12
CDC42BPA-203ENST00000366766 RUFY1Q96T51 708 aa14.33□□□□□ -0.12
CDC42BPA-203ENST00000366766 LUC7LQ9NQ29 371 aaKnown RBP14.32□□□□□ -0.12
CDC42BPA-203ENST00000366766 RDXP35241 583 aaKnown RBP14.32□□□□□ -0.12
CDC42BPA-203ENST00000366766 URB2Q14146 1524 aaKnown RBP14.32□□□□□ -0.12
CDC42BPA-203ENST00000366766 ZNF592Q92610 1267 aa14.32□□□□□ -0.12
CDC42BPA-203ENST00000366766 TRIM5Q9C035 493 aa14.32□□□□□ -0.12
CDC42BPA-203ENST00000366766 NLRP2Q9NX02 1062 aa14.32□□□□□ -0.12
CDC42BPA-203ENST00000366766 TCOF1Q13428 1488 aaKnown RBP14.32□□□□□ -0.12
CDC42BPA-203ENST00000366766 FOXD4L6Q3SYB3 417 aaPredicted RBP14.32□□□□□ -0.12
CDC42BPA-203ENST00000366766 FOXD4L3Q6VB84 417 aaPredicted RBP14.32□□□□□ -0.12
CDC42BPA-203ENST00000366766 CTNNA3Q9UI47 895 aa14.32□□□□□ -0.12
CDC42BPA-203ENST00000366766 MAPKBP1O60336 1514 aa14.32□□□□□ -0.12
CDC42BPA-203ENST00000366766 SLC4A2P04920 1241 aa14.31□□□□□ -0.12
CDC42BPA-203ENST00000366766 PLB1Q6P1J6 1458 aa14.31□□□□□ -0.12
CDC42BPA-203ENST00000366766 PCMTD1Q96MG8 357 aaPredicted RBP14.31□□□□□ -0.12
CDC42BPA-203ENST00000366766 TMPOP42166 694 aaKnown RBP14.31□□□□□ -0.12
CDC42BPA-203ENST00000366766 FILIP1LQ4L180 1135 aa14.31□□□□□ -0.12
CDC42BPA-203ENST00000366766 GPATCH8Q9UKJ3 1502 aaKnown RBP14.31□□□□□ -0.12
CDC42BPA-203ENST00000366766 ZNF771Q7L3S4 317 aaPredicted RBP14.31□□□□□ -0.12
CDC42BPA-203ENST00000366766 KIF2AO00139 706 aaPredicted RBP14.31□□□□□ -0.12
CDC42BPA-203ENST00000366766 TXNDC2Q86VQ3 553 aa14.31□□□□□ -0.12
CDC42BPA-203ENST00000366766 NEUROD6Q96NK8 337 aa14.3□□□□□ -0.12
CDC42BPA-203ENST00000366766 NACAP1Q9BZK3 213 aa14.3□□□□□ -0.12
CDC42BPA-203ENST00000366766 TRIM22Q8IYM9 498 aa14.3□□□□□ -0.12
CDC42BPA-203ENST00000366766 TTC21BQ7Z4L5 1316 aa14.3□□□□□ -0.12
CDC42BPA-203ENST00000366766 WASHC4Q2M389 1173 aa14.3□□□□□ -0.12
CDC42BPA-203ENST00000366766 FAM13BQ9NYF5 915 aa14.3□□□□□ -0.12
CDC42BPA-203ENST00000366766 CCDC158Q5M9N0 1113 aa14.3□□□□□ -0.12
CDC42BPA-203ENST00000366766 CABP1Q9NZU7 370 aa14.3□□□□□ -0.12
CDC42BPA-203ENST00000366766 SPG7Q9UQ90 795 aa14.3□□□□□ -0.12
CDC42BPA-203ENST00000366766 CCDC66A2RUB6 948 aa14.29□□□□□ -0.12
CDC42BPA-203ENST00000366766 TATP17735 454 aaPredicted RBP14.29□□□□□ -0.12
CDC42BPA-203ENST00000366766 KIAA0556O60303 1618 aa14.29□□□□□ -0.12
CDC42BPA-203ENST00000366766 KCNH5Q8NCM2 988 aa14.29□□□□□ -0.12
CDC42BPA-203ENST00000366766 PTPRCP08575 1304 aa14.29□□□□□ -0.12
CDC42BPA-203ENST00000366766 SULT6B1Q6IMI4 303 aa14.29□□□□□ -0.12
CDC42BPA-203ENST00000366766 NECTIN2Q92692 538 aa14.29□□□□□ -0.12
CDC42BPA-203ENST00000366766 BCAR3O75815 825 aa14.28□□□□□ -0.12
CDC42BPA-203ENST00000366766 CAVIN2O95810 425 aa14.28□□□□□ -0.12
CDC42BPA-203ENST00000366766 RBM33Q96EV2 1170 aaKnown RBP14.28□□□□□ -0.12
CDC42BPA-203ENST00000366766 ANKRD36BQ8N2N9 1353 aa14.28□□□□□ -0.12
CDC42BPA-203ENST00000366766 ADAMTS12P58397 1594 aa14.28□□□□□ -0.12
CDC42BPA-203ENST00000366766 ARID3AQ99856 593 aa14.28□□□□□ -0.12
CDC42BPA-203ENST00000366766 CBFA2T2O43439 604 aa14.28□□□□□ -0.12
CDC42BPA-203ENST00000366766 CCDC43Q96MW1 224 aaKnown RBP14.28□□□□□ -0.12
CDC42BPA-203ENST00000366766 MCM4P33991 863 aa14.28□□□□□ -0.12
CDC42BPA-203ENST00000366766 STIM1Q13586 685 aa14.28□□□□□ -0.12
CDC42BPA-203ENST00000366766 SH2B1Q9NRF2 756 aaPredicted RBP14.27□□□□□ -0.12
CDC42BPA-203ENST00000366766 FANCAO15360 1455 aa14.27□□□□□ -0.12
CDC42BPA-203ENST00000366766 CD109Q6YHK3 1445 aa14.27□□□□□ -0.12
CDC42BPA-203ENST00000366766 WDR62O43379 1518 aa14.27□□□□□ -0.12
CDC42BPA-203ENST00000366766 KDM5BQ9UGL1 1544 aa14.27□□□□□ -0.12
CDC42BPA-203ENST00000366766 GRPEL1Q9HAV7 217 aa14.27□□□□□ -0.13
CDC42BPA-203ENST00000366766 EPS15P42566 896 aa14.26□□□□□ -0.13
CDC42BPA-203ENST00000366766 WASF1Q92558 559 aa14.26□□□□□ -0.13
CDC42BPA-203ENST00000366766 DCTN1Q14203 1278 aa14.26□□□□□ -0.13
CDC42BPA-203ENST00000366766 STK38Q15208 465 aa14.26□□□□□ -0.13
CDC42BPA-203ENST00000366766 TSR2Q969E8 191 aaKnown RBP14.26□□□□□ -0.13
CDC42BPA-203ENST00000366766 CTDP1Q9Y5B0 961 aaPredicted RBP14.26□□□□□ -0.13
CDC42BPA-203ENST00000366766 PRPF40AO75400 957 aaKnown RBP14.25□□□□□ -0.13
CDC42BPA-203ENST00000366766 PUS7Q96PZ0 661 aaKnown RBP14.25□□□□□ -0.13
CDC42BPA-203ENST00000366766 GLRX3O76003 335 aaKnown RBP14.25□□□□□ -0.13
CDC42BPA-203ENST00000366766 RARSP54136 660 aaKnown RBP14.25□□□□□ -0.13
CDC42BPA-203ENST00000366766 IQCEQ6IPM2 695 aa14.25□□□□□ -0.13
CDC42BPA-203ENST00000366766 BLOC1S2Q6QNY1 142 aa14.25□□□□□ -0.13
CDC42BPA-203ENST00000366766 AMOTQ4VCS5 1084 aa14.25□□□□□ -0.13
CDC42BPA-203ENST00000366766 KIF1BPQ96EK5 621 aa14.25□□□□□ -0.13
CDC42BPA-203ENST00000366766 TNMDQ9H2S6 317 aa14.25□□□□□ -0.13
CDC42BPA-203ENST00000366766 ZNF530Q6P9A1 599 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms