RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 RIPK4P57078 832 aa13.42□□□□□ -0.26
SMC3-201ENST00000361804 C22orf23Q9BZE7 217 aa13.42□□□□□ -0.26
SMC3-201ENST00000361804 CCDC27Q2M243 656 aa13.42□□□□□ -0.26
SMC3-201ENST00000361804 NWD1Q149M9 1564 aa13.42□□□□□ -0.26
SMC3-201ENST00000361804 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.41□□□□□ -0.26
SMC3-201ENST00000361804 ZNF142P52746 1687 aaPredicted RBP13.41□□□□□ -0.26
SMC3-201ENST00000361804 MLECQ14165 292 aa13.41□□□□□ -0.26
SMC3-201ENST00000361804 NGEFQ8N5V2 710 aa13.41□□□□□ -0.26
SMC3-201ENST00000361804 ATAD2Q6PL18 1390 aa13.41□□□□□ -0.26
SMC3-201ENST00000361804 PPIP5K1Q6PFW1 1433 aa13.41□□□□□ -0.26
SMC3-201ENST00000361804 RRAGDQ9NQL2 400 aaPredicted RBP13.41□□□□□ -0.26
SMC3-201ENST00000361804 POLKQ9UBT6 870 aa13.41□□□□□ -0.26
SMC3-201ENST00000361804 OVOS2A0A0J9YW53 1432 aa13.4□□□□□ -0.26
SMC3-201ENST00000361804 HMOX1P09601 288 aa13.4□□□□□ -0.26
SMC3-201ENST00000361804 OVOS2Q6IE36 1432 aa13.4□□□□□ -0.26
SMC3-201ENST00000361804 SLC24A1O60721 1099 aa13.39□□□□□ -0.27
SMC3-201ENST00000361804 ATF7IPQ6VMQ6 1270 aa13.39□□□□□ -0.27
SMC3-201ENST00000361804 CEBPAP49715 358 aaPredicted RBP13.39□□□□□ -0.27
SMC3-201ENST00000361804 CDK12Q9NYV4 1490 aaPredicted RBP13.39□□□□□ -0.27
SMC3-201ENST00000361804 TNRQ92752 1358 aa13.38□□□□□ -0.27
SMC3-201ENST00000361804 LRRC37A3O60309 1634 aa13.38□□□□□ -0.27
SMC3-201ENST00000361804 DIP2AQ14689 1571 aa13.38□□□□□ -0.27
SMC3-201ENST00000361804 RGPD2P0DJD1 1756 aa13.38□□□□□ -0.27
SMC3-201ENST00000361804 ADAMTSL3P82987 1691 aa13.38□□□□□ -0.27
SMC3-201ENST00000361804 PHACTR3Q96KR7 559 aa13.37□□□□□ -0.27
SMC3-201ENST00000361804 EDC4Q6P2E9 1401 aaKnown RBP13.37□□□□□ -0.27
SMC3-201ENST00000361804 RSPH6AQ9H0K4 717 aa13.37□□□□□ -0.27
SMC3-201ENST00000361804 XRCC6P12956 609 aaKnown RBP eCLIP13.37□□□□□ -0.27
SMC3-201ENST00000361804 TSPYL6Q8N831 410 aa13.37□□□□□ -0.27
SMC3-201ENST00000361804 MCM4P33991 863 aa13.36□□□□□ -0.27
SMC3-201ENST00000361804 TXNDC2Q86VQ3 553 aa13.36□□□□□ -0.27
SMC3-201ENST00000361804 PLEKHG1Q9ULL1 1385 aa13.36□□□□□ -0.27
SMC3-201ENST00000361804 TUBGCP6Q96RT7 1819 aa13.36□□□□□ -0.27
SMC3-201ENST00000361804 NCBP3Q53F19 620 aaKnown RBP13.36□□□□□ -0.27
SMC3-201ENST00000361804 RBM42Q9BTD8 480 aaKnown RBP13.36□□□□□ -0.27
SMC3-201ENST00000361804 CD2BP2O95400 341 aaKnown RBP13.35□□□□□ -0.27
SMC3-201ENST00000361804 NME9Q86XW9 330 aa13.35□□□□□ -0.27
SMC3-201ENST00000361804 WASLO00401 505 aaPredicted RBP13.35□□□□□ -0.27
SMC3-201ENST00000361804 ZBTB40Q9NUA8 1239 aa13.35□□□□□ -0.27
SMC3-201ENST00000361804 PRKAR2BP31323 418 aa13.35□□□□□ -0.27
SMC3-201ENST00000361804 DDX19BQ9UMR2 479 aa13.34□□□□□ -0.27
SMC3-201ENST00000361804 EMILIN1Q9Y6C2 1016 aa13.34□□□□□ -0.27
SMC3-201ENST00000361804 LTN1O94822 1766 aa13.34□□□□□ -0.27
SMC3-201ENST00000361804 IL13P35225 146 aa13.34□□□□□ -0.27
SMC3-201ENST00000361804 DIAPH1O60610 1272 aaKnown RBP13.33□□□□□ -0.27
SMC3-201ENST00000361804 STRCP1A6NGW2 1772 aa13.33□□□□□ -0.28
SMC3-201ENST00000361804 ANKRD45Q5TZF3 282 aa13.33□□□□□ -0.28
SMC3-201ENST00000361804 CEP170BQ9Y4F5 1589 aaPredicted RBP13.33□□□□□ -0.28
SMC3-201ENST00000361804 AATKQ6ZMQ8 1374 aa13.33□□□□□ -0.28
SMC3-201ENST00000361804 CRYBG1Q9Y4K1 1723 aa13.33□□□□□ -0.28
SMC3-201ENST00000361804 TRAK2O60296 914 aa13.32□□□□□ -0.28
SMC3-201ENST00000361804 HDAC1Q13547 482 aaPredicted RBP13.32□□□□□ -0.28
SMC3-201ENST00000361804 SMC5Q8IY18 1101 aa13.32□□□□□ -0.28
SMC3-201ENST00000361804 SIRT1Q96EB6 747 aa13.32□□□□□ -0.28
SMC3-201ENST00000361804 DCTN1Q14203 1278 aa13.32□□□□□ -0.28
SMC3-201ENST00000361804 FAM83GA6ND36 823 aa13.32□□□□□ -0.28
SMC3-201ENST00000361804 PTCH1Q13635 1447 aa13.31□□□□□ -0.28
SMC3-201ENST00000361804 FAM43AQ8N2R8 423 aa13.31□□□□□ -0.28
SMC3-201ENST00000361804 N4BP2Q86UW6 1770 aaPredicted RBP13.31□□□□□ -0.28
SMC3-201ENST00000361804 ZNF692Q9BU19 519 aaPredicted RBP13.31□□□□□ -0.28
SMC3-201ENST00000361804 RGS12O14924 1447 aa13.31□□□□□ -0.28
SMC3-201ENST00000361804 GOLGA6L3A6NEY3 463 aa13.3□□□□□ -0.28
SMC3-201ENST00000361804 HSCBQ8IWL3 235 aa13.3□□□□□ -0.28
SMC3-201ENST00000361804 USP6P35125 1406 aa13.3□□□□□ -0.28
SMC3-201ENST00000361804 CHD1LQ86WJ1 897 aa13.3□□□□□ -0.28
SMC3-201ENST00000361804 CHMP5Q9NZZ3 219 aa13.3□□□□□ -0.28
SMC3-201ENST00000361804 NUCB1Q02818 461 aa13.29□□□□□ -0.28
SMC3-201ENST00000361804 USP31Q70CQ4 1352 aa13.29□□□□□ -0.28
SMC3-201ENST00000361804 APBB1O00213 710 aa13.29□□□□□ -0.28
SMC3-201ENST00000361804 SIRT2Q8IXJ6 389 aa13.29□□□□□ -0.28
SMC3-201ENST00000361804 PHRF1Q9P1Y6 1649 aaKnown RBP13.29□□□□□ -0.28
SMC3-201ENST00000361804 KRT24Q2M2I5 525 aa13.28□□□□□ -0.28
SMC3-201ENST00000361804 NUDT16Q96DE0 195 aaKnown RBP13.28□□□□□ -0.28
SMC3-201ENST00000361804 AAMPQ13685 434 aa13.28□□□□□ -0.28
SMC3-201ENST00000361804 TERF2IPQ9NYB0 399 aa13.28□□□□□ -0.28
SMC3-201ENST00000361804 ZNF853P0CG23 659 aa13.28□□□□□ -0.28
SMC3-201ENST00000361804 FAM208AQ9UK61 1670 aaKnown RBP13.28□□□□□ -0.28
SMC3-201ENST00000361804 RRS1Q15050 365 aaKnown RBP13.28□□□□□ -0.28
SMC3-201ENST00000361804 KIF2CQ99661 725 aa13.28□□□□□ -0.28
SMC3-201ENST00000361804 TRPM3Q9HCF6 1732 aaPredicted RBP13.27□□□□□ -0.28
SMC3-201ENST00000361804 TNPO1Q92973 898 aaKnown RBP13.27□□□□□ -0.28
SMC3-201ENST00000361804 C16orf71Q8IYS4 520 aaPredicted RBP13.27□□□□□ -0.29
SMC3-201ENST00000361804 HSP90AB1P08238 724 aaKnown RBP13.26□□□□□ -0.29
SMC3-201ENST00000361804 GAS2L3Q86XJ1 694 aa13.26□□□□□ -0.29
SMC3-201ENST00000361804 ZBTB7BO15156 539 aaPredicted RBP13.26□□□□□ -0.29
SMC3-201ENST00000361804 C8orf58Q8NAV2 365 aa13.26□□□□□ -0.29
SMC3-201ENST00000361804 FSD2A1L4K1 749 aa13.26□□□□□ -0.29
SMC3-201ENST00000361804 VAMP4O75379 141 aa13.26□□□□□ -0.29
SMC3-201ENST00000361804 L1TD1Q5T7N2 865 aaKnown RBP13.25□□□□□ -0.29
SMC3-201ENST00000361804 TBC1D9Q6ZT07 1266 aa13.25□□□□□ -0.29
SMC3-201ENST00000361804 MBIPQ9NS73 344 aa13.25□□□□□ -0.29
SMC3-201ENST00000361804 STAG3Q9UJ98 1225 aa13.25□□□□□ -0.29
SMC3-201ENST00000361804 KIF16BQ96L93 1317 aa13.25□□□□□ -0.29
SMC3-201ENST00000361804 RGPD5Q99666 1765 aa13.25□□□□□ -0.29
SMC3-201ENST00000361804 NFAT5O94916 1531 aa13.25□□□□□ -0.29
SMC3-201ENST00000361804 HDGFL2Q7Z4V5 671 aaPredicted RBP13.25□□□□□ -0.29
SMC3-201ENST00000361804 HSP90AA1P07900 732 aaKnown RBP13.24□□□□□ -0.29
SMC3-201ENST00000361804 OTUD7AQ8TE49 926 aaPredicted RBP13.24□□□□□ -0.29
SMC3-201ENST00000361804 IPO8O15397 1037 aaKnown RBP13.24□□□□□ -0.29
SMC3-201ENST00000361804 MRPL50Q8N5N7 158 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms