RNA–Protein interactions for RNA: ENST00000361675.6

CALD1-201, Transcript of caldesmon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALD1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-201ENST00000361675 EGFL6Q8IUX8 553 aa11.11□□□□□ -0.63
CALD1-201ENST00000361675 KIF3AQ9Y496 699 aa11.11□□□□□ -0.63
CALD1-201ENST00000361675 VWDEQ8N2E2 1590 aa11.11□□□□□ -0.63
CALD1-201ENST00000361675 CFAP70Q5T0N1 1121 aa11.11□□□□□ -0.63
CALD1-201ENST00000361675 SPHKAPQ2M3C7 1700 aa11.11□□□□□ -0.63
CALD1-201ENST00000361675 RNF123Q5XPI4 1314 aa11.1□□□□□ -0.63
CALD1-201ENST00000361675 DHX16O60231 1041 aaKnown RBP11.1□□□□□ -0.63
CALD1-201ENST00000361675 PRR29P0C7W0 189 aa11.1□□□□□ -0.63
CALD1-201ENST00000361675 CAVIN1Q6NZI2 390 aaKnown RBP11.1□□□□□ -0.63
CALD1-201ENST00000361675 MLECQ14165 292 aa11.1□□□□□ -0.63
CALD1-201ENST00000361675 CCDC97Q96F63 343 aaPredicted RBP11.1□□□□□ -0.63
CALD1-201ENST00000361675 SENP3Q9H4L4 574 aaPredicted RBP11.1□□□□□ -0.63
CALD1-201ENST00000361675 CFAP65Q6ZU64 1925 aaKnown RBP11.1□□□□□ -0.63
CALD1-201ENST00000361675 MYBBP1AQ9BQG0 1328 aaKnown RBP11.09□□□□□ -0.63
CALD1-201ENST00000361675 IRF6O14896 467 aa11.09□□□□□ -0.63
CALD1-201ENST00000361675 CT47B1P0C2W7 299 aaPredicted RBP11.09□□□□□ -0.63
CALD1-201ENST00000361675 GGT6Q6P531 493 aa11.09□□□□□ -0.63
CALD1-201ENST00000361675 CD109Q6YHK3 1445 aa11.09□□□□□ -0.63
CALD1-201ENST00000361675 RINLQ6ZS11 566 aa11.09□□□□□ -0.63
CALD1-201ENST00000361675 TERF1P54274 439 aa11.09□□□□□ -0.63
CALD1-201ENST00000361675 LMOD2Q6P5Q4 547 aa11.09□□□□□ -0.63
CALD1-201ENST00000361675 ISY1Q9ULR0 285 aaKnown RBP11.09□□□□□ -0.63
CALD1-201ENST00000361675 PARD3Q8TEW0 1356 aa11.09□□□□□ -0.63
CALD1-201ENST00000361675 RNF17Q9BXT8 1623 aaKnown RBP11.09□□□□□ -0.63
CALD1-201ENST00000361675 LRPPRCP42704 1394 aaKnown RBP11.08□□□□□ -0.64
CALD1-201ENST00000361675 TTC36A6NLP5 189 aa11.08□□□□□ -0.64
CALD1-201ENST00000361675 SPTY2D1Q68D10 685 aaPredicted RBP11.08□□□□□ -0.64
CALD1-201ENST00000361675 APBB1IPQ7Z5R6 666 aaPredicted RBP11.08□□□□□ -0.64
CALD1-201ENST00000361675 MRVI1Q9Y6F6 885 aa11.08□□□□□ -0.64
CALD1-201ENST00000361675 TET3O43151 1660 aa11.08□□□□□ -0.64
CALD1-201ENST00000361675 FRMPD1Q5SYB0 1578 aa11.08□□□□□ -0.64
CALD1-201ENST00000361675 MPHOSPH10O00566 681 aaKnown RBP11.08□□□□□ -0.64
CALD1-201ENST00000361675 RBM27Q9P2N5 1060 aaKnown RBP11.08□□□□□ -0.64
CALD1-201ENST00000361675 CEP152O94986 1710 aa11.07□□□□□ -0.64
CALD1-201ENST00000361675 PPRC1Q5VV67 1664 aaKnown RBP11.07□□□□□ -0.64
CALD1-201ENST00000361675 NUTM2DQ5VT03 806 aaPredicted RBP11.07□□□□□ -0.64
CALD1-201ENST00000361675 LAMC1P11047 1609 aa11.07□□□□□ -0.64
CALD1-201ENST00000361675 BRPF1P55201 1214 aaPredicted RBP11.07□□□□□ -0.64
CALD1-201ENST00000361675 GTF2A1P52655 376 aaPredicted RBP11.06□□□□□ -0.64
CALD1-201ENST00000361675 TMF1P82094 1093 aa11.06□□□□□ -0.64
CALD1-201ENST00000361675 SKOR2Q2VWA4 1001 aaPredicted RBP11.06□□□□□ -0.64
CALD1-201ENST00000361675 C17orf53Q8N3J3 647 aaPredicted RBP11.05□□□□□ -0.64
CALD1-201ENST00000361675 ZKSCAN5Q9Y2L8 839 aa11.05□□□□□ -0.64
CALD1-201ENST00000361675 MROH2AA6NES4 1674 aa11.05□□□□□ -0.64
CALD1-201ENST00000361675 EIF2AK4Q9P2K8 1649 aaKnown RBP11.05□□□□□ -0.64
CALD1-201ENST00000361675 CHGAP10645 457 aaKnown RBP11.05□□□□□ -0.64
CALD1-201ENST00000361675 FOXD4Q12950 439 aaPredicted RBP11.05□□□□□ -0.64
CALD1-201ENST00000361675 BRD4O60885 1362 aaPredicted RBP11.05□□□□□ -0.64
CALD1-201ENST00000361675 KANK1Q14678 1352 aa11.05□□□□□ -0.64
CALD1-201ENST00000361675 HMGN5P82970 282 aaKnown RBP11.05□□□□□ -0.64
CALD1-201ENST00000361675 CYB5RLQ6IPT4 315 aa11.05□□□□□ -0.64
CALD1-201ENST00000361675 TNPO1Q92973 898 aaKnown RBP11.05□□□□□ -0.64
CALD1-201ENST00000361675 IQGAP1P46940 1657 aa11.05□□□□□ -0.64
CALD1-201ENST00000361675 WDR43Q15061 677 aaKnown RBP eCLIP11.04□□□□□ -0.64
CALD1-201ENST00000361675 POGZQ7Z3K3 1410 aa11.04□□□□□ -0.64
CALD1-201ENST00000361675 ZNF518AQ6AHZ1 1483 aa11.04□□□□□ -0.64
CALD1-201ENST00000361675 CSB-PGBD3P0DP91 1061 aa11.04□□□□□ -0.64
CALD1-201ENST00000361675 ATL2Q8NHH9 583 aa11.04□□□□□ -0.64
CALD1-201ENST00000361675 CARD10Q9BWT7 1032 aa11.04□□□□□ -0.64
CALD1-201ENST00000361675 GPBP1L1Q9HC44 474 aaPredicted RBP11.04□□□□□ -0.64
CALD1-201ENST00000361675 CCDC39Q9UFE4 941 aa11.04□□□□□ -0.64
CALD1-201ENST00000361675 NOL7Q9UMY1 257 aaKnown RBP11.04□□□□□ -0.64
CALD1-201ENST00000361675 ANTXR1Q9H6X2 564 aa11.04□□□□□ -0.64
CALD1-201ENST00000361675 MFSD4BQ5TF39 518 aa11.03□□□□□ -0.64
CALD1-201ENST00000361675 MCTP1Q6DN14 999 aa11.03□□□□□ -0.64
CALD1-201ENST00000361675 TERF2IPQ9NYB0 399 aa11.03□□□□□ -0.64
CALD1-201ENST00000361675 NPATQ14207 1427 aa11.03□□□□□ -0.64
CALD1-201ENST00000361675 EFCAB6Q5THR3 1501 aa11.03□□□□□ -0.64
CALD1-201ENST00000361675 KIF4AO95239 1232 aa11.03□□□□□ -0.64
CALD1-201ENST00000361675 SRPK2P78362 688 aaKnown RBP11.03□□□□□ -0.64
CALD1-201ENST00000361675 NLRP13Q86W25 1043 aa11.03□□□□□ -0.64
CALD1-201ENST00000361675 CALCOCO1Q9P1Z2 691 aa11.03□□□□□ -0.64
CALD1-201ENST00000361675 ADRA2BP18089 450 aa11.03□□□□□ -0.64
CALD1-201ENST00000361675 PSEN1P49768 467 aa11.03□□□□□ -0.64
CALD1-201ENST00000361675 MMP14P50281 582 aa11.02□□□□□ -0.64
CALD1-201ENST00000361675 TMEM132EQ6IEE7 984 aa11.02□□□□□ -0.64
CALD1-201ENST00000361675 CALR3Q96L12 384 aaKnown RBP11.02□□□□□ -0.64
CALD1-201ENST00000361675 RSPH14Q9UHP6 348 aa11.02□□□□□ -0.64
CALD1-201ENST00000361675 NBPF11Q86T75 865 aa11.02□□□□□ -0.65
CALD1-201ENST00000361675 ABCA6Q8N139 1617 aa11.02□□□□□ -0.65
CALD1-201ENST00000361675 SCAF11Q99590 1463 aaKnown RBP11.02□□□□□ -0.65
CALD1-201ENST00000361675 NPHP1O15259 732 aa11.02□□□□□ -0.65
CALD1-201ENST00000361675 GET4Q7L5D6 327 aaPredicted RBP11.02□□□□□ -0.65
CALD1-201ENST00000361675 MYRIPQ8NFW9 859 aa11.02□□□□□ -0.65
CALD1-201ENST00000361675 C22orf23Q9BZE7 217 aa11.02□□□□□ -0.65
CALD1-201ENST00000361675 NAP1L1P55209 391 aaKnown RBP11.01□□□□□ -0.65
CALD1-201ENST00000361675 CCDC181Q5TID7 509 aa11.01□□□□□ -0.65
CALD1-201ENST00000361675 FBXW7Q969H0 707 aa11.01□□□□□ -0.65
CALD1-201ENST00000361675 BCL2L12Q9HB09 334 aa11.01□□□□□ -0.65
CALD1-201ENST00000361675 NOS1P29475 1434 aa11.01□□□□□ -0.65
CALD1-201ENST00000361675 GTF2F1P35269 517 aaKnown RBP eCLIP11.01□□□□□ -0.65
CALD1-201ENST00000361675 MAP2K1Q02750 393 aaPredicted RBP11.01□□□□□ -0.65
CALD1-201ENST00000361675 GORABQ5T7V8 394 aa11.01□□□□□ -0.65
CALD1-201ENST00000361675 CARD14Q9BXL6 1004 aa11□□□□□ -0.65
CALD1-201ENST00000361675 YEATS2Q9ULM3 1422 aa11□□□□□ -0.65
CALD1-201ENST00000361675 ADAMTS8Q9UP79 889 aa11□□□□□ -0.65
CALD1-201ENST00000361675 NBPF20Q3BBV1 942 aa10.99□□□□□ -0.65
CALD1-201ENST00000361675 PPP1R9BQ96SB3 815 aa10.99□□□□□ -0.65
CALD1-201ENST00000361675 SIGLEC1Q9BZZ2 1709 aa10.99□□□□□ -0.65
CALD1-201ENST00000361675 MAP3K4Q9Y6R4 1608 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms