RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 FAM135BQ49AJ0 1406 aa20.43■□□□□ 0.86
IFT140-201ENST00000361339 C1orf115Q9H7X2 142 aa20.43■□□□□ 0.86
IFT140-201ENST00000361339 AEBP1Q8IUX7 1158 aa20.42■□□□□ 0.86
IFT140-201ENST00000361339 CPSF1Q10570 1443 aaKnown RBP20.42■□□□□ 0.86
IFT140-201ENST00000361339 ROBO2Q9HCK4 1378 aa20.41■□□□□ 0.86
IFT140-201ENST00000361339 SLC26A8Q96RN1 970 aa20.41■□□□□ 0.86
IFT140-201ENST00000361339 ATP7BP35670 1465 aa20.41■□□□□ 0.86
IFT140-201ENST00000361339 LTKP29376 864 aa20.4■□□□□ 0.86
IFT140-201ENST00000361339 NFE2L2Q16236 605 aa20.4■□□□□ 0.86
IFT140-201ENST00000361339 NCBP3Q53F19 620 aaKnown RBP20.4■□□□□ 0.86
IFT140-201ENST00000361339 DLC1Q96QB1 1528 aa20.4■□□□□ 0.86
IFT140-201ENST00000361339 PPP6R1Q9UPN7 881 aa20.4■□□□□ 0.86
IFT140-201ENST00000361339 CCDC61Q9Y6R9 512 aa20.4■□□□□ 0.86
IFT140-201ENST00000361339 IL16Q14005 1332 aa20.39■□□□□ 0.86
IFT140-201ENST00000361339 REREQ9P2R6 1566 aa20.39■□□□□ 0.85
IFT140-201ENST00000361339 COG3Q96JB2 828 aa20.39■□□□□ 0.85
IFT140-201ENST00000361339 MBIPQ9NS73 344 aa20.39■□□□□ 0.85
IFT140-201ENST00000361339 KRT24Q2M2I5 525 aa20.38■□□□□ 0.85
IFT140-201ENST00000361339 ZBTB40Q9NUA8 1239 aa20.38■□□□□ 0.85
IFT140-201ENST00000361339 EDC4Q6P2E9 1401 aaKnown RBP20.38■□□□□ 0.85
IFT140-201ENST00000361339 CT47B1P0C2W7 299 aaPredicted RBP20.37■□□□□ 0.85
IFT140-201ENST00000361339 DDX19BQ9UMR2 479 aa20.37■□□□□ 0.85
IFT140-201ENST00000361339 VAMP4O75379 141 aa20.37■□□□□ 0.85
IFT140-201ENST00000361339 C8orf58Q8NAV2 365 aa20.37■□□□□ 0.85
IFT140-201ENST00000361339 TNRQ92752 1358 aa20.36■□□□□ 0.85
IFT140-201ENST00000361339 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.35■□□□□ 0.85
IFT140-201ENST00000361339 TBC1D2Q9BYX2 928 aa20.35■□□□□ 0.85
IFT140-201ENST00000361339 LNPKQ9C0E8 428 aa20.35■□□□□ 0.85
IFT140-201ENST00000361339 VIRMAQ69YN4 1812 aaKnown RBP20.35■□□□□ 0.85
IFT140-201ENST00000361339 MFAP1P55081 439 aaKnown RBP20.34■□□□□ 0.85
IFT140-201ENST00000361339 UPF2Q9HAU5 1272 aaKnown RBP20.33■□□□□ 0.85
IFT140-201ENST00000361339 MRPL50Q8N5N7 158 aaKnown RBP20.33■□□□□ 0.84
IFT140-201ENST00000361339 TMEM2Q9UHN6 1383 aa20.33■□□□□ 0.84
IFT140-201ENST00000361339 KIF13AQ9H1H9 1805 aa20.32■□□□□ 0.84
IFT140-201ENST00000361339 CDC42BPGQ6DT37 1551 aa20.32■□□□□ 0.84
IFT140-201ENST00000361339 ACEP12821 1306 aa20.32■□□□□ 0.84
IFT140-201ENST00000361339 KIF16BQ96L93 1317 aa20.32■□□□□ 0.84
IFT140-201ENST00000361339 HDAC1Q13547 482 aaPredicted RBP20.32■□□□□ 0.84
IFT140-201ENST00000361339 AAMPQ13685 434 aa20.32■□□□□ 0.84
IFT140-201ENST00000361339 HSP90AB2PQ58FF8 381 aa20.32■□□□□ 0.84
IFT140-201ENST00000361339 SULT6B1Q6IMI4 303 aa20.32■□□□□ 0.84
IFT140-201ENST00000361339 EIF4A2Q14240 407 aaKnown RBP20.31■□□□□ 0.84
IFT140-201ENST00000361339 TBC1D32Q96NH3 1257 aa20.31■□□□□ 0.84
IFT140-201ENST00000361339 ADAMTS13Q76LX8 1427 aa20.31■□□□□ 0.84
IFT140-201ENST00000361339 MCM10Q7L590 875 aa20.3■□□□□ 0.84
IFT140-201ENST00000361339 TWISTNBQ3B726 338 aaPredicted RBP20.3■□□□□ 0.84
IFT140-201ENST00000361339 SMC5Q8IY18 1101 aa20.3■□□□□ 0.84
IFT140-201ENST00000361339 ANTXR1Q9H6X2 564 aa20.3■□□□□ 0.84
IFT140-201ENST00000361339 IPO8O15397 1037 aaKnown RBP20.29■□□□□ 0.84
IFT140-201ENST00000361339 ZNF853P0CG23 659 aa20.29■□□□□ 0.84
IFT140-201ENST00000361339 MCM4P33991 863 aa20.29■□□□□ 0.84
IFT140-201ENST00000361339 ALDH1L2Q3SY69 923 aa20.29■□□□□ 0.84
IFT140-201ENST00000361339 CDK12Q9NYV4 1490 aaPredicted RBP20.29■□□□□ 0.84
IFT140-201ENST00000361339 TTC21BQ7Z4L5 1316 aa20.29■□□□□ 0.84
IFT140-201ENST00000361339 TRAK2O60296 914 aa20.28■□□□□ 0.84
IFT140-201ENST00000361339 ZBTB7BO15156 539 aaPredicted RBP20.28■□□□□ 0.84
IFT140-201ENST00000361339 CLCN1P35523 988 aa20.28■□□□□ 0.84
IFT140-201ENST00000361339 MIS18AQ9NYP9 233 aa20.28■□□□□ 0.84
IFT140-201ENST00000361339 SIRT2Q8IXJ6 389 aa20.27■□□□□ 0.84
IFT140-201ENST00000361339 PTPRUQ92729 1446 aa20.27■□□□□ 0.84
IFT140-201ENST00000361339 GNAI1P63096 354 aa20.27■□□□□ 0.83
IFT140-201ENST00000361339 IFT57Q9NWB7 429 aa20.27■□□□□ 0.83
IFT140-201ENST00000361339 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.27■□□□□ 0.83
IFT140-201ENST00000361339 FOXO3O43524 673 aa20.26■□□□□ 0.83
IFT140-201ENST00000361339 AATKQ6ZMQ8 1374 aa20.26■□□□□ 0.83
IFT140-201ENST00000361339 DLG5Q8TDM6 1919 aa20.25■□□□□ 0.83
IFT140-201ENST00000361339 TECPR2O15040 1411 aa20.25■□□□□ 0.83
IFT140-201ENST00000361339 CFAP44Q96MT7 982 aa20.25■□□□□ 0.83
IFT140-201ENST00000361339 ANKRD45Q5TZF3 282 aa20.24■□□□□ 0.83
IFT140-201ENST00000361339 ARID3AQ99856 593 aa20.24■□□□□ 0.83
IFT140-201ENST00000361339 UBR1Q8IWV7 1749 aa20.24■□□□□ 0.83
IFT140-201ENST00000361339 NUTM2GQ5VZR2 741 aa20.24■□□□□ 0.83
IFT140-201ENST00000361339 ERBB4Q15303 1308 aa20.24■□□□□ 0.83
IFT140-201ENST00000361339 MON2Q7Z3U7 1717 aa20.24■□□□□ 0.83
IFT140-201ENST00000361339 NUCB1Q02818 461 aa20.23■□□□□ 0.83
IFT140-201ENST00000361339 TRIM44Q96DX7 344 aaPredicted RBP20.23■□□□□ 0.83
IFT140-201ENST00000361339 C3P01024 1663 aa20.23■□□□□ 0.83
IFT140-201ENST00000361339 RRP9O43818 475 aaKnown RBP20.22■□□□□ 0.83
IFT140-201ENST00000361339 FOXD4L1Q9NU39 408 aa20.22■□□□□ 0.83
IFT140-201ENST00000361339 HDGFP51858 240 aaKnown RBP20.22■□□□□ 0.83
IFT140-201ENST00000361339 C22orf23Q9BZE7 217 aa20.22■□□□□ 0.83
IFT140-201ENST00000361339 AMOTL2Q9Y2J4 779 aa20.22■□□□□ 0.83
IFT140-201ENST00000361339 CHD1LQ86WJ1 897 aa20.22■□□□□ 0.83
IFT140-201ENST00000361339 ZNF692Q9BU19 519 aaPredicted RBP20.22■□□□□ 0.83
IFT140-201ENST00000361339 ESPNB1AK53 854 aa20.21■□□□□ 0.83
IFT140-201ENST00000361339 RBM33Q96EV2 1170 aaKnown RBP20.21■□□□□ 0.83
IFT140-201ENST00000361339 FSD2A1L4K1 749 aa20.2■□□□□ 0.82
IFT140-201ENST00000361339 GRPEL1Q9HAV7 217 aa20.2■□□□□ 0.82
IFT140-201ENST00000361339 AKAP12Q02952 1782 aa20.19■□□□□ 0.82
IFT140-201ENST00000361339 SIRT1Q96EB6 747 aa20.19■□□□□ 0.82
IFT140-201ENST00000361339 ABCC4O15439 1325 aa20.19■□□□□ 0.82
IFT140-201ENST00000361339 ITSN1Q15811 1721 aa20.18■□□□□ 0.82
IFT140-201ENST00000361339 PEAK1Q9H792 1746 aa20.18■□□□□ 0.82
IFT140-201ENST00000361339 USP6P35125 1406 aa20.18■□□□□ 0.82
IFT140-201ENST00000361339 PTCH1Q13635 1447 aa20.18■□□□□ 0.82
IFT140-201ENST00000361339 KNDC1Q76NI1 1749 aa20.18■□□□□ 0.82
IFT140-201ENST00000361339 MAP3K19Q56UN5 1328 aa20.17■□□□□ 0.82
IFT140-201ENST00000361339 BRPF1P55201 1214 aaPredicted RBP20.17■□□□□ 0.82
IFT140-201ENST00000361339 CALD1Q05682 793 aaKnown RBP20.17■□□□□ 0.82
IFT140-201ENST00000361339 OVOS2A0A0J9YW53 1432 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms