RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 BRINP3Q76B58 766 aa15.92■□□□□ 0.14
UBA3-202ENST00000361055 PIK3C2AO00443 1686 aa15.92■□□□□ 0.14
UBA3-202ENST00000361055 TRPM3Q9HCF6 1732 aaPredicted RBP15.92■□□□□ 0.14
UBA3-202ENST00000361055 CLUAP1Q96AJ1 413 aa15.92■□□□□ 0.14
UBA3-202ENST00000361055 NPHP3Q7Z494 1330 aa15.91■□□□□ 0.14
UBA3-202ENST00000361055 CCDC27Q2M243 656 aa15.91■□□□□ 0.14
UBA3-202ENST00000361055 COG3Q96JB2 828 aa15.91■□□□□ 0.14
UBA3-202ENST00000361055 NFKBIBQ15653 356 aa15.9■□□□□ 0.14
UBA3-202ENST00000361055 KRT28Q7Z3Y7 464 aa15.9■□□□□ 0.14
UBA3-202ENST00000361055 USP54Q70EL1 1684 aa15.9■□□□□ 0.14
UBA3-202ENST00000361055 MAPK8IP3Q9UPT6 1336 aa15.9■□□□□ 0.14
UBA3-202ENST00000361055 IQSEC2Q5JU85 1478 aa15.9■□□□□ 0.14
UBA3-202ENST00000361055 USP31Q70CQ4 1352 aa15.89■□□□□ 0.13
UBA3-202ENST00000361055 OVOS2A0A0J9YW53 1432 aa15.89■□□□□ 0.13
UBA3-202ENST00000361055 OVOS2Q6IE36 1432 aa15.89■□□□□ 0.13
UBA3-202ENST00000361055 SLC4A3P48751 1232 aa15.89■□□□□ 0.13
UBA3-202ENST00000361055 RARSP54136 660 aaKnown RBP15.89■□□□□ 0.13
UBA3-202ENST00000361055 TCP11L2Q8N4U5 519 aa15.89■□□□□ 0.13
UBA3-202ENST00000361055 ZRANB1Q9UGI0 708 aa15.89■□□□□ 0.13
UBA3-202ENST00000361055 TNNT2P45379 298 aaPredicted RBP15.88■□□□□ 0.13
UBA3-202ENST00000361055 XPCQ01831 940 aaPredicted RBP15.88■□□□□ 0.13
UBA3-202ENST00000361055 ABTB2Q8N961 1025 aa15.88■□□□□ 0.13
UBA3-202ENST00000361055 CFAP53Q96M91 514 aa15.88■□□□□ 0.13
UBA3-202ENST00000361055 MAP2P11137 1827 aaKnown RBP15.88■□□□□ 0.13
UBA3-202ENST00000361055 NHSL1Q5SYE7 1610 aa15.88■□□□□ 0.13
UBA3-202ENST00000361055 MARF1Q9Y4F3 1742 aaKnown RBP15.88■□□□□ 0.13
UBA3-202ENST00000361055 CANXP27824 592 aaKnown RBP15.87■□□□□ 0.13
UBA3-202ENST00000361055 COG6Q9Y2V7 657 aa15.87■□□□□ 0.13
UBA3-202ENST00000361055 ROBO1Q9Y6N7 1651 aa15.87■□□□□ 0.13
UBA3-202ENST00000361055 PXDNQ92626 1479 aa15.87■□□□□ 0.13
UBA3-202ENST00000361055 PANK1Q8TE04 598 aa15.87■□□□□ 0.13
UBA3-202ENST00000361055 ALS2Q96Q42 1657 aa15.87■□□□□ 0.13
UBA3-202ENST00000361055 GSE1Q14687 1217 aa15.86■□□□□ 0.13
UBA3-202ENST00000361055 DDX17Q92841 729 aaKnown RBP15.86■□□□□ 0.13
UBA3-202ENST00000361055 SBNO1A3KN83 1393 aa15.86■□□□□ 0.13
UBA3-202ENST00000361055 TOM1O60784 492 aa15.86■□□□□ 0.13
UBA3-202ENST00000361055 MTHFSP49914 203 aa15.86■□□□□ 0.13
UBA3-202ENST00000361055 NLRP6P59044 892 aa15.86■□□□□ 0.13
UBA3-202ENST00000361055 AATKQ6ZMQ8 1374 aa15.85■□□□□ 0.13
UBA3-202ENST00000361055 USP19O94966 1318 aa15.83■□□□□ 0.13
UBA3-202ENST00000361055 SOS2Q07890 1332 aaPredicted RBP15.83■□□□□ 0.13
UBA3-202ENST00000361055 NEUROD2Q15784 382 aa15.83■□□□□ 0.13
UBA3-202ENST00000361055 CERKQ8TCT0 537 aa15.83■□□□□ 0.13
UBA3-202ENST00000361055 SHPRHQ149N8 1683 aa15.83■□□□□ 0.12
UBA3-202ENST00000361055 FRAT1Q92837 279 aaPredicted RBP15.83■□□□□ 0.12
UBA3-202ENST00000361055 MYH16Q9H6N6 1097 aa15.83■□□□□ 0.12
UBA3-202ENST00000361055 TNS3Q68CZ2 1445 aa15.82■□□□□ 0.12
UBA3-202ENST00000361055 NUTM2GQ5VZR2 741 aa15.82■□□□□ 0.12
UBA3-202ENST00000361055 RRP7AQ9Y3A4 280 aaKnown RBP15.82■□□□□ 0.12
UBA3-202ENST00000361055 LMOD2Q6P5Q4 547 aa15.82■□□□□ 0.12
UBA3-202ENST00000361055 AHDC1Q5TGY3 1603 aaPredicted RBP15.81■□□□□ 0.12
UBA3-202ENST00000361055 SPATA31A3Q5VYP0 1347 aa15.81■□□□□ 0.12
UBA3-202ENST00000361055 CT47B1P0C2W7 299 aaPredicted RBP15.81■□□□□ 0.12
UBA3-202ENST00000361055 POLKQ9UBT6 870 aa15.8■□□□□ 0.12
UBA3-202ENST00000361055 ARHGEF10O15013 1369 aa15.8■□□□□ 0.12
UBA3-202ENST00000361055 FBLN1P23142 703 aa15.8■□□□□ 0.12
UBA3-202ENST00000361055 RWDD1Q9H446 243 aaPredicted RBP15.8■□□□□ 0.12
UBA3-202ENST00000361055 PCDHB15Q9Y5E8 787 aa15.8■□□□□ 0.12
UBA3-202ENST00000361055 UBAP1LF5GYI3 381 aa15.79■□□□□ 0.12
UBA3-202ENST00000361055 SLIT3O75094 1523 aa15.79■□□□□ 0.12
UBA3-202ENST00000361055 KCNH5Q8NCM2 988 aa15.79■□□□□ 0.12
UBA3-202ENST00000361055 RLBP1P12271 317 aa15.78■□□□□ 0.12
UBA3-202ENST00000361055 BECN1Q14457 450 aa15.78■□□□□ 0.12
UBA3-202ENST00000361055 RRS1Q15050 365 aaKnown RBP15.77■□□□□ 0.12
UBA3-202ENST00000361055 LTN1O94822 1766 aa15.77■□□□□ 0.11
UBA3-202ENST00000361055 PNPLA6Q8IY17 1366 aa15.77■□□□□ 0.11
UBA3-202ENST00000361055 SOX12O15370 315 aa15.77■□□□□ 0.11
UBA3-202ENST00000361055 SEC24BO95487 1268 aa15.77■□□□□ 0.11
UBA3-202ENST00000361055 PIP4K2BP78356 416 aa15.77■□□□□ 0.11
UBA3-202ENST00000361055 EMILIN1Q9Y6C2 1016 aa15.77■□□□□ 0.11
UBA3-202ENST00000361055 PHLPP1O60346 1717 aa15.77■□□□□ 0.11
UBA3-202ENST00000361055 CRYBG1Q9Y4K1 1723 aa15.77■□□□□ 0.11
UBA3-202ENST00000361055 NFAT5O94916 1531 aa15.77■□□□□ 0.11
UBA3-202ENST00000361055 MED1Q15648 1581 aaPredicted RBP15.76■□□□□ 0.11
UBA3-202ENST00000361055 CDK12Q9NYV4 1490 aaPredicted RBP15.76■□□□□ 0.11
UBA3-202ENST00000361055 U2AF1L5P0DN76 240 aaPredicted RBP15.76■□□□□ 0.11
UBA3-202ENST00000361055 U2AF1Q01081 240 aaKnown RBP eCLIP15.76■□□□□ 0.11
UBA3-202ENST00000361055 PHRF1Q9P1Y6 1649 aaKnown RBP15.76■□□□□ 0.11
UBA3-202ENST00000361055 PDZRN3Q9UPQ7 1066 aa15.76■□□□□ 0.11
UBA3-202ENST00000361055 FRAT2O75474 233 aaPredicted RBP15.75■□□□□ 0.11
UBA3-202ENST00000361055 GCP02774 474 aa15.75■□□□□ 0.11
UBA3-202ENST00000361055 IL27Q8NEV9 243 aa15.75■□□□□ 0.11
UBA3-202ENST00000361055 COL3A1P02461 1466 aaPredicted RBP15.75■□□□□ 0.11
UBA3-202ENST00000361055 MVPQ14764 893 aaKnown RBP15.75■□□□□ 0.11
UBA3-202ENST00000361055 ZKSCAN2Q63HK3 967 aa15.75■□□□□ 0.11
UBA3-202ENST00000361055 LRRC59Q96AG4 307 aaKnown RBP15.75■□□□□ 0.11
UBA3-202ENST00000361055 PEAK1Q9H792 1746 aa15.75■□□□□ 0.11
UBA3-202ENST00000361055 MAP3K19Q56UN5 1328 aa15.74■□□□□ 0.11
UBA3-202ENST00000361055 KIF24Q5T7B8 1368 aa15.74■□□□□ 0.11
UBA3-202ENST00000361055 UPF2Q9HAU5 1272 aaKnown RBP15.74■□□□□ 0.11
UBA3-202ENST00000361055 TNNQ9UQP3 1299 aa15.73■□□□□ 0.11
UBA3-202ENST00000361055 COL16A1Q07092 1604 aaPredicted RBP15.73■□□□□ 0.11
UBA3-202ENST00000361055 DZIP1LQ8IYY4 767 aaKnown RBP15.73■□□□□ 0.11
UBA3-202ENST00000361055 PLEKHF1Q96S99 279 aa15.73■□□□□ 0.11
UBA3-202ENST00000361055 VIRMAQ69YN4 1812 aaKnown RBP15.73■□□□□ 0.11
UBA3-202ENST00000361055 FLT4P35916 1363 aa15.72■□□□□ 0.11
UBA3-202ENST00000361055 AMPHP49418 695 aa15.72■□□□□ 0.11
UBA3-202ENST00000361055 BCL2L13Q9BXK5 485 aa15.72■□□□□ 0.11
UBA3-202ENST00000361055 IL16Q14005 1332 aa15.72■□□□□ 0.11
UBA3-202ENST00000361055 ABCA3Q99758 1704 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms