RNA–Protein interactions for RNA: ENST00000360540.9

PCMTD1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCMTD1, Length 4,252 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-201ENST00000360540 RABEP1Q15276 862 aa17.08■□□□□ 0.32
PCMTD1-201ENST00000360540 CSPP1Q1MSJ5 1256 aa17.07■□□□□ 0.32
PCMTD1-201ENST00000360540 KRT24Q2M2I5 525 aa17.07■□□□□ 0.32
PCMTD1-201ENST00000360540 AEBP1Q8IUX7 1158 aa17.07■□□□□ 0.32
PCMTD1-201ENST00000360540 ANO8Q9HCE9 1232 aaPredicted RBP17.07■□□□□ 0.32
PCMTD1-201ENST00000360540 STRN4Q9NRL3 753 aa17.07■□□□□ 0.32
PCMTD1-201ENST00000360540 MBIPQ9NS73 344 aa17.07■□□□□ 0.32
PCMTD1-201ENST00000360540 FOXO3O43524 673 aa17.07■□□□□ 0.32
PCMTD1-201ENST00000360540 ANXA1P04083 346 aa17.07■□□□□ 0.32
PCMTD1-201ENST00000360540 MRE11P49959 708 aa17.07■□□□□ 0.32
PCMTD1-201ENST00000360540 PLEKHO1Q53GL0 409 aaPredicted RBP17.07■□□□□ 0.32
PCMTD1-201ENST00000360540 HSP90AB4PQ58FF6 505 aa17.06■□□□□ 0.32
PCMTD1-201ENST00000360540 LARP6Q9BRS8 491 aaKnown RBP17.06■□□□□ 0.32
PCMTD1-201ENST00000360540 CCT4P50991 539 aaKnown RBP17.06■□□□□ 0.32
PCMTD1-201ENST00000360540 TEX14Q8IWB6 1497 aa17.06■□□□□ 0.32
PCMTD1-201ENST00000360540 NINLQ9Y2I6 1382 aa17.06■□□□□ 0.32
PCMTD1-201ENST00000360540 CNTROBQ8N137 903 aa17.06■□□□□ 0.32
PCMTD1-201ENST00000360540 AMOTL2Q9Y2J4 779 aa17.06■□□□□ 0.32
PCMTD1-201ENST00000360540 ADAMTS12P58397 1594 aa17.06■□□□□ 0.32
PCMTD1-201ENST00000360540 WASHC4Q2M389 1173 aa17.05■□□□□ 0.32
PCMTD1-201ENST00000360540 CWC27Q6UX04 472 aaKnown RBP17.05■□□□□ 0.32
PCMTD1-201ENST00000360540 CCDC85AQ96PX6 553 aaPredicted RBP17.05■□□□□ 0.32
PCMTD1-201ENST00000360540 BECN2A8MW95 431 aa17.05■□□□□ 0.32
PCMTD1-201ENST00000360540 STK3Q13188 491 aa17.05■□□□□ 0.32
PCMTD1-201ENST00000360540 TSPYL6Q8N831 410 aa17.04■□□□□ 0.32
PCMTD1-201ENST00000360540 PHACTR3Q96KR7 559 aa17.04■□□□□ 0.32
PCMTD1-201ENST00000360540 CEBPZQ03701 1054 aaKnown RBP17.04■□□□□ 0.32
PCMTD1-201ENST00000360540 RNF20Q5VTR2 975 aa17.04■□□□□ 0.32
PCMTD1-201ENST00000360540 C8orf34Q49A92 452 aa17.04■□□□□ 0.32
PCMTD1-201ENST00000360540 HSP90AA2PQ14568 343 aaPredicted RBP17.03■□□□□ 0.32
PCMTD1-201ENST00000360540 CPLX1O14810 134 aa17.03■□□□□ 0.32
PCMTD1-201ENST00000360540 FAM13BQ9NYF5 915 aa17.03■□□□□ 0.32
PCMTD1-201ENST00000360540 MPRIPQ6WCQ1 1025 aa17.03■□□□□ 0.32
PCMTD1-201ENST00000360540 IFT57Q9NWB7 429 aa17.03■□□□□ 0.32
PCMTD1-201ENST00000360540 FAM43AQ8N2R8 423 aa17.02■□□□□ 0.32
PCMTD1-201ENST00000360540 RPAP2Q8IXW5 612 aaPredicted RBP17.02■□□□□ 0.32
PCMTD1-201ENST00000360540 C8orf58Q8NAV2 365 aa17.02■□□□□ 0.32
PCMTD1-201ENST00000360540 KIF21AQ7Z4S6 1674 aa17.02■□□□□ 0.32
PCMTD1-201ENST00000360540 BTBD11A6QL63 1104 aa17.02■□□□□ 0.31
PCMTD1-201ENST00000360540 GOLGA6L19H0YKK7 550 aa17.02■□□□□ 0.31
PCMTD1-201ENST00000360540 RASSF8Q8NHQ8 419 aa17.02■□□□□ 0.31
PCMTD1-201ENST00000360540 KIF3AQ9Y496 699 aa17.01■□□□□ 0.31
PCMTD1-201ENST00000360540 KDM6BO15054 1643 aa17.01■□□□□ 0.31
PCMTD1-201ENST00000360540 GNAT3A8MTJ3 354 aa17.01■□□□□ 0.31
PCMTD1-201ENST00000360540 ZNF592Q92610 1267 aa17.01■□□□□ 0.31
PCMTD1-201ENST00000360540 RSPH6AQ9H0K4 717 aa17.01■□□□□ 0.31
PCMTD1-201ENST00000360540 A2MP01023 1474 aa17■□□□□ 0.31
PCMTD1-201ENST00000360540 POLKQ9UBT6 870 aa17■□□□□ 0.31
PCMTD1-201ENST00000360540 ASXL2Q76L83 1435 aa17■□□□□ 0.31
PCMTD1-201ENST00000360540 ALDH1L2Q3SY69 923 aa17■□□□□ 0.31
PCMTD1-201ENST00000360540 RBM42Q9BTD8 480 aaKnown RBP17■□□□□ 0.31
PCMTD1-201ENST00000360540 ACEP12821 1306 aa17■□□□□ 0.31
PCMTD1-201ENST00000360540 TAF7Q15545 349 aaPredicted RBP17■□□□□ 0.31
PCMTD1-201ENST00000360540 ASXL1Q8IXJ9 1541 aa17■□□□□ 0.31
PCMTD1-201ENST00000360540 TBC1D9Q6ZT07 1266 aa16.99■□□□□ 0.31
PCMTD1-201ENST00000360540 AACSQ86V21 672 aa16.99■□□□□ 0.31
PCMTD1-201ENST00000360540 C16orf71Q8IYS4 520 aaPredicted RBP16.99■□□□□ 0.31
PCMTD1-201ENST00000360540 LRRFIP2Q9Y608 721 aaKnown RBP16.99■□□□□ 0.31
PCMTD1-201ENST00000360540 CFAP65Q6ZU64 1925 aaKnown RBP16.99■□□□□ 0.31
PCMTD1-201ENST00000360540 MEIS3Q99687 375 aa16.99■□□□□ 0.31
PCMTD1-201ENST00000360540 SSFA2P28290 1259 aa16.99■□□□□ 0.31
PCMTD1-201ENST00000360540 STK11IPQ8N1F8 1099 aa16.98■□□□□ 0.31
PCMTD1-201ENST00000360540 PTCD1O75127 700 aaKnown RBP16.98■□□□□ 0.31
PCMTD1-201ENST00000360540 GRPEL1Q9HAV7 217 aa16.98■□□□□ 0.31
PCMTD1-201ENST00000360540 TBC1D32Q96NH3 1257 aa16.97■□□□□ 0.31
PCMTD1-201ENST00000360540 R3HCC1Q9Y3T6 440 aaKnown RBP16.97■□□□□ 0.31
PCMTD1-201ENST00000360540 ANKLE2Q86XL3 938 aa16.97■□□□□ 0.31
PCMTD1-201ENST00000360540 DENND4BO75064 1496 aaPredicted RBP16.97■□□□□ 0.31
PCMTD1-201ENST00000360540 FERMT3Q86UX7 667 aa16.96■□□□□ 0.31
PCMTD1-201ENST00000360540 JARID2Q92833 1246 aaPredicted RBP16.96■□□□□ 0.31
PCMTD1-201ENST00000360540 PES1O00541 588 aaKnown RBP16.96■□□□□ 0.31
PCMTD1-201ENST00000360540 TATP17735 454 aaPredicted RBP16.96■□□□□ 0.31
PCMTD1-201ENST00000360540 DUOX2Q9NRD8 1548 aa16.96■□□□□ 0.31
PCMTD1-201ENST00000360540 ABCC11Q96J66 1382 aa16.96■□□□□ 0.31
PCMTD1-201ENST00000360540 ATP2B1P20020 1258 aa16.96■□□□□ 0.31
PCMTD1-201ENST00000360540 MX1P20591 662 aa16.96■□□□□ 0.3
PCMTD1-201ENST00000360540 DNMT1P26358 1616 aaKnown RBP16.95■□□□□ 0.3
PCMTD1-201ENST00000360540 SPATA31E1Q6ZUB1 1445 aa16.95■□□□□ 0.3
PCMTD1-201ENST00000360540 FLIIQ13045 1269 aa16.95■□□□□ 0.3
PCMTD1-201ENST00000360540 TOM1L2Q6ZVM7 507 aa16.95■□□□□ 0.3
PCMTD1-201ENST00000360540 TRDNQ13061 729 aa16.95■□□□□ 0.3
PCMTD1-201ENST00000360540 NFXL1Q6ZNB6 911 aa16.95■□□□□ 0.3
PCMTD1-201ENST00000360540 GDPD2Q9HCC8 539 aa16.95■□□□□ 0.3
PCMTD1-201ENST00000360540 JAKMIP1Q96N16 626 aaKnown RBP16.94■□□□□ 0.3
PCMTD1-201ENST00000360540 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.94■□□□□ 0.3
PCMTD1-201ENST00000360540 ITSN2Q9NZM3 1697 aa16.94■□□□□ 0.3
PCMTD1-201ENST00000360540 TNPO1Q92973 898 aaKnown RBP16.94■□□□□ 0.3
PCMTD1-201ENST00000360540 ANKRD36BQ8N2N9 1353 aa16.94■□□□□ 0.3
PCMTD1-201ENST00000360540 MTMR7Q9Y216 660 aa16.94■□□□□ 0.3
PCMTD1-201ENST00000360540 EIF4G3O43432 1585 aaKnown RBP16.94■□□□□ 0.3
PCMTD1-201ENST00000360540 CABP4P57796 275 aa16.93■□□□□ 0.3
PCMTD1-201ENST00000360540 RALYLQ86SE5 291 aaKnown RBP16.93■□□□□ 0.3
PCMTD1-201ENST00000360540 FMNL2Q96PY5 1086 aa16.93■□□□□ 0.3
PCMTD1-201ENST00000360540 TPM4P67936 248 aa16.93■□□□□ 0.3
PCMTD1-201ENST00000360540 CCDC8Q9H0W5 538 aaPredicted RBP16.93■□□□□ 0.3
PCMTD1-201ENST00000360540 BOLA2Q9H3K6 86 aa16.93■□□□□ 0.3
PCMTD1-201ENST00000360540 CPLX2Q6PUV4 134 aaKnown RBP16.93■□□□□ 0.3
PCMTD1-201ENST00000360540 PRDM11Q9NQV5 511 aa16.92■□□□□ 0.3
PCMTD1-201ENST00000360540 VSIG10Q8N0Z9 540 aa16.92■□□□□ 0.3
PCMTD1-201ENST00000360540 SPC24Q8NBT2 197 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms