RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 CDK5RAP3Q96JB5 506 aa15.82■□□□□ 0.12
CCDC144A-203ENST00000360495 EPB41L2O43491 1005 aaKnown RBP15.82■□□□□ 0.12
CCDC144A-203ENST00000360495 MROH2BQ7Z745 1585 aa15.82■□□□□ 0.12
CCDC144A-203ENST00000360495 SMTNL1A8MU46 457 aa15.82■□□□□ 0.12
CCDC144A-203ENST00000360495 SFPQP23246 707 aaKnown RBP eCLIP15.82■□□□□ 0.12
CCDC144A-203ENST00000360495 FAM107BQ9H098 131 aa15.82■□□□□ 0.12
CCDC144A-203ENST00000360495 VGFO15240 615 aaPredicted RBP15.82■□□□□ 0.12
CCDC144A-203ENST00000360495 CCAR1Q8IX12 1150 aaKnown RBP15.82■□□□□ 0.12
CCDC144A-203ENST00000360495 CCDC148Q8NFR7 591 aa15.82■□□□□ 0.12
CCDC144A-203ENST00000360495 URI1O94763 535 aaPredicted RBP15.81■□□□□ 0.12
CCDC144A-203ENST00000360495 TNNT1P13805 278 aa15.81■□□□□ 0.12
CCDC144A-203ENST00000360495 CHD1LQ86WJ1 897 aa15.81■□□□□ 0.12
CCDC144A-203ENST00000360495 DDX11Q96FC9 970 aa15.81■□□□□ 0.12
CCDC144A-203ENST00000360495 STIM1Q13586 685 aa15.81■□□□□ 0.12
CCDC144A-203ENST00000360495 RIC3Q7Z5B4 369 aa15.81■□□□□ 0.12
CCDC144A-203ENST00000360495 CFAP45Q9UL16 551 aa15.81■□□□□ 0.12
CCDC144A-203ENST00000360495 EID1Q9Y6B2 187 aa15.81■□□□□ 0.12
CCDC144A-203ENST00000360495 TIGD1Q96MW7 591 aa15.81■□□□□ 0.12
CCDC144A-203ENST00000360495 FYB1O15117 783 aa15.81■□□□□ 0.12
CCDC144A-203ENST00000360495 BBXQ8WY36 941 aaPredicted RBP15.81■□□□□ 0.12
CCDC144A-203ENST00000360495 PPP2R1AP30153 589 aa15.8■□□□□ 0.12
CCDC144A-203ENST00000360495 RBM25P49756 843 aaKnown RBP15.8■□□□□ 0.12
CCDC144A-203ENST00000360495 EZRP15311 586 aaKnown RBP15.8■□□□□ 0.12
CCDC144A-203ENST00000360495 CFAP100Q494V2 611 aa15.8■□□□□ 0.12
CCDC144A-203ENST00000360495 ZSCAN12O43309 604 aa15.8■□□□□ 0.12
CCDC144A-203ENST00000360495 STK11IPQ8N1F8 1099 aa15.8■□□□□ 0.12
CCDC144A-203ENST00000360495 CAMK4Q16566 473 aa15.8■□□□□ 0.12
CCDC144A-203ENST00000360495 MAP9Q49MG5 647 aa15.8■□□□□ 0.12
CCDC144A-203ENST00000360495 MTMR7Q9Y216 660 aa15.79■□□□□ 0.12
CCDC144A-203ENST00000360495 MCM5P33992 734 aa15.79■□□□□ 0.12
CCDC144A-203ENST00000360495 AIMP1Q12904 312 aaKnown RBP15.79■□□□□ 0.12
CCDC144A-203ENST00000360495 MVPQ14764 893 aaKnown RBP15.79■□□□□ 0.12
CCDC144A-203ENST00000360495 MIA2Q96PC5 1412 aa15.79■□□□□ 0.12
CCDC144A-203ENST00000360495 JAKMIP3Q5VZ66 844 aa15.79■□□□□ 0.12
CCDC144A-203ENST00000360495 KIAA1328Q86T90 577 aa15.79■□□□□ 0.12
CCDC144A-203ENST00000360495 C16orf45Q96MC5 204 aaPredicted RBP15.79■□□□□ 0.12
CCDC144A-203ENST00000360495 PPP6R1Q9UPN7 881 aa15.79■□□□□ 0.12
CCDC144A-203ENST00000360495 GNAI2P04899 355 aa15.79■□□□□ 0.12
CCDC144A-203ENST00000360495 CCDC183Q5T5S1 534 aa15.79■□□□□ 0.12
CCDC144A-203ENST00000360495 TANGO6Q9C0B7 1094 aa15.79■□□□□ 0.12
CCDC144A-203ENST00000360495 ZSCAN31Q96LW9 406 aaPredicted RBP15.78■□□□□ 0.12
CCDC144A-203ENST00000360495 CASQ1P31415 396 aa15.78■□□□□ 0.12
CCDC144A-203ENST00000360495 RNF187Q5TA31 235 aaPredicted RBP15.78■□□□□ 0.12
CCDC144A-203ENST00000360495 MTHFSP49914 203 aa15.78■□□□□ 0.12
CCDC144A-203ENST00000360495 USP25Q9UHP3 1055 aa15.78■□□□□ 0.12
CCDC144A-203ENST00000360495 PDRG1Q9NUG6 133 aa15.78■□□□□ 0.12
CCDC144A-203ENST00000360495 GGNBP2Q9H3C7 697 aa15.78■□□□□ 0.12
CCDC144A-203ENST00000360495 MAP2K1Q02750 393 aaPredicted RBP15.77■□□□□ 0.12
CCDC144A-203ENST00000360495 MICALCLQ6ZW33 695 aa15.77■□□□□ 0.12
CCDC144A-203ENST00000360495 TWISTNBQ3B726 338 aaPredicted RBP15.77■□□□□ 0.12
CCDC144A-203ENST00000360495 KRT18P05783 430 aaKnown RBP15.77■□□□□ 0.11
CCDC144A-203ENST00000360495 TSR2Q969E8 191 aaKnown RBP15.77■□□□□ 0.11
CCDC144A-203ENST00000360495 CLIP2Q9UDT6 1046 aa15.77■□□□□ 0.11
CCDC144A-203ENST00000360495 ERC1Q8IUD2 1116 aa15.76■□□□□ 0.11
CCDC144A-203ENST00000360495 PNISRQ8TF01 805 aaKnown RBP15.76■□□□□ 0.11
CCDC144A-203ENST00000360495 SLC26A8Q96RN1 970 aa15.76■□□□□ 0.11
CCDC144A-203ENST00000360495 GOLGA6L10A0A0M3HER8 536 aa15.76■□□□□ 0.11
CCDC144A-203ENST00000360495 TAF4BQ92750 862 aa15.76■□□□□ 0.11
CCDC144A-203ENST00000360495 BLOC1S2Q6QNY1 142 aa15.76■□□□□ 0.11
CCDC144A-203ENST00000360495 TBC1D2BQ9UPU7 963 aa15.76■□□□□ 0.11
CCDC144A-203ENST00000360495 CLCN1P35523 988 aa15.75■□□□□ 0.11
CCDC144A-203ENST00000360495 NBPF1Q3BBV0 1214 aa15.75■□□□□ 0.11
CCDC144A-203ENST00000360495 CCDC30Q5VVM6 783 aa15.75■□□□□ 0.11
CCDC144A-203ENST00000360495 PRIMPOLQ96LW4 560 aa15.75■□□□□ 0.11
CCDC144A-203ENST00000360495 KIF5CO60282 957 aa15.75■□□□□ 0.11
CCDC144A-203ENST00000360495 MCM3P25205 808 aa15.75■□□□□ 0.11
CCDC144A-203ENST00000360495 LMAN1P49257 510 aa15.75■□□□□ 0.11
CCDC144A-203ENST00000360495 GTF2A1P52655 376 aaPredicted RBP15.75■□□□□ 0.11
CCDC144A-203ENST00000360495 KIF4BQ2VIQ3 1234 aa15.75■□□□□ 0.11
CCDC144A-203ENST00000360495 ATF7IPQ6VMQ6 1270 aa15.75■□□□□ 0.11
CCDC144A-203ENST00000360495 JAKMIP1Q96N16 626 aaKnown RBP15.75■□□□□ 0.11
CCDC144A-203ENST00000360495 TNPO1Q92973 898 aaKnown RBP15.75■□□□□ 0.11
CCDC144A-203ENST00000360495 MAP4K4O95819 1239 aaPredicted RBP15.75■□□□□ 0.11
CCDC144A-203ENST00000360495 SMARCC1Q92922 1105 aaPredicted RBP15.75■□□□□ 0.11
CCDC144A-203ENST00000360495 TRMT1Q9NXH9 659 aaKnown RBP15.75■□□□□ 0.11
CCDC144A-203ENST00000360495 BMS1Q14692 1282 aaKnown RBP15.74■□□□□ 0.11
CCDC144A-203ENST00000360495 SSFA2P28290 1259 aa15.74■□□□□ 0.11
CCDC144A-203ENST00000360495 TRIM22Q8IYM9 498 aa15.74■□□□□ 0.11
CCDC144A-203ENST00000360495 PDIA4P13667 645 aaKnown RBP15.74■□□□□ 0.11
CCDC144A-203ENST00000360495 MNAT1P51948 309 aa15.73■□□□□ 0.11
CCDC144A-203ENST00000360495 GBP2P32456 591 aaPredicted RBP15.73■□□□□ 0.11
CCDC144A-203ENST00000360495 EIF5P55010 431 aaKnown RBP15.73■□□□□ 0.11
CCDC144A-203ENST00000360495 SAMD1Q6SPF0 538 aaPredicted RBP15.73■□□□□ 0.11
CCDC144A-203ENST00000360495 CADPSQ9ULU8 1353 aa15.73■□□□□ 0.11
CCDC144A-203ENST00000360495 TBC1D2Q9BYX2 928 aa15.73■□□□□ 0.11
CCDC144A-203ENST00000360495 ANO10Q9NW15 660 aa15.72■□□□□ 0.11
CCDC144A-203ENST00000360495 TDRD9Q8NDG6 1382 aaKnown RBP15.72■□□□□ 0.11
CCDC144A-203ENST00000360495 KRT222Q8N1A0 295 aa15.72■□□□□ 0.11
CCDC144A-203ENST00000360495 CNKSR2Q8WXI2 1034 aa15.72■□□□□ 0.11
CCDC144A-203ENST00000360495 DNAAF4Q8WXU2 420 aa15.72■□□□□ 0.11
CCDC144A-203ENST00000360495 NEMFO60524 1076 aa15.72■□□□□ 0.11
CCDC144A-203ENST00000360495 FERMT3Q86UX7 667 aa15.72■□□□□ 0.11
CCDC144A-203ENST00000360495 SRCIN1Q9C0H9 1055 aa15.72■□□□□ 0.11
CCDC144A-203ENST00000360495 CCDC113Q9H0I3 377 aa15.72■□□□□ 0.11
CCDC144A-203ENST00000360495 ZFP91Q96JP5 570 aaPredicted RBP15.71■□□□□ 0.11
CCDC144A-203ENST00000360495 ADCY5O95622 1261 aa15.71■□□□□ 0.1
CCDC144A-203ENST00000360495 PRKAR2BP31323 418 aa15.71■□□□□ 0.1
CCDC144A-203ENST00000360495 IMMTQ16891 758 aaKnown RBP15.71■□□□□ 0.1
CCDC144A-203ENST00000360495 TOP1P11387 765 aaKnown RBP15.7■□□□□ 0.1
CCDC144A-203ENST00000360495 CCDC184Q52MB2 194 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms