RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 NLRP6P59044 892 aa14.27□□□□□ -0.13
TRAPPC4-201ENST00000359005 LARP1Q6PKG0 1096 aaKnown RBP14.27□□□□□ -0.13
TRAPPC4-201ENST00000359005 DEFB132Q7Z7B7 95 aa14.27□□□□□ -0.13
TRAPPC4-201ENST00000359005 ITSN1Q15811 1721 aa14.27□□□□□ -0.13
TRAPPC4-201ENST00000359005 USP6P35125 1406 aa14.26□□□□□ -0.13
TRAPPC4-201ENST00000359005 EDC4Q6P2E9 1401 aaKnown RBP14.26□□□□□ -0.13
TRAPPC4-201ENST00000359005 TTC21BQ7Z4L5 1316 aa14.26□□□□□ -0.13
TRAPPC4-201ENST00000359005 KRT27Q7Z3Y8 459 aa14.26□□□□□ -0.13
TRAPPC4-201ENST00000359005 ANKRD26Q9UPS8 1709 aa14.26□□□□□ -0.13
TRAPPC4-201ENST00000359005 MARF1Q9Y4F3 1742 aaKnown RBP14.26□□□□□ -0.13
TRAPPC4-201ENST00000359005 SPATA31A1Q5TZJ5 1347 aa14.25□□□□□ -0.13
TRAPPC4-201ENST00000359005 ABCA3Q99758 1704 aa14.25□□□□□ -0.13
TRAPPC4-201ENST00000359005 TOPAZ1Q8N9V7 1692 aa14.25□□□□□ -0.13
TRAPPC4-201ENST00000359005 PNNQ9H307 717 aaKnown RBP14.24□□□□□ -0.13
TRAPPC4-201ENST00000359005 USP35Q9P2H5 1018 aa14.24□□□□□ -0.13
TRAPPC4-201ENST00000359005 NUDCQ9Y266 331 aa14.24□□□□□ -0.13
TRAPPC4-201ENST00000359005 AXIN2Q9Y2T1 843 aa14.24□□□□□ -0.13
TRAPPC4-201ENST00000359005 KIF20BQ96Q89 1820 aa14.24□□□□□ -0.13
TRAPPC4-201ENST00000359005 BLMP54132 1417 aaPredicted RBP14.24□□□□□ -0.13
TRAPPC4-201ENST00000359005 CPDO75976 1380 aa14.23□□□□□ -0.13
TRAPPC4-201ENST00000359005 A0A0G2JS52 829 aa14.23□□□□□ -0.13
TRAPPC4-201ENST00000359005 MYT1Q01538 1121 aa14.23□□□□□ -0.13
TRAPPC4-201ENST00000359005 CAMTA1Q9Y6Y1 1673 aa14.23□□□□□ -0.13
TRAPPC4-201ENST00000359005 CPSF1Q10570 1443 aaKnown RBP14.23□□□□□ -0.13
TRAPPC4-201ENST00000359005 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.22□□□□□ -0.13
TRAPPC4-201ENST00000359005 ZBTB7CA1YPR0 619 aa14.22□□□□□ -0.13
TRAPPC4-201ENST00000359005 SOX12O15370 315 aa14.22□□□□□ -0.13
TRAPPC4-201ENST00000359005 EVA1CP58658 441 aa14.22□□□□□ -0.13
TRAPPC4-201ENST00000359005 CD163L1Q9NR16 1453 aa14.22□□□□□ -0.13
TRAPPC4-201ENST00000359005 CRYBG1Q9Y4K1 1723 aa14.21□□□□□ -0.13
TRAPPC4-201ENST00000359005 PLCH1Q4KWH8 1693 aa14.21□□□□□ -0.13
TRAPPC4-201ENST00000359005 CCDC125Q86Z20 511 aa14.21□□□□□ -0.13
TRAPPC4-201ENST00000359005 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.21□□□□□ -0.13
TRAPPC4-201ENST00000359005 ARHGEF25Q86VW2 580 aa14.2□□□□□ -0.14
TRAPPC4-201ENST00000359005 NME9Q86XW9 330 aa14.2□□□□□ -0.14
TRAPPC4-201ENST00000359005 COG3Q96JB2 828 aa14.2□□□□□ -0.14
TRAPPC4-201ENST00000359005 AKAP12Q02952 1782 aa14.19□□□□□ -0.14
TRAPPC4-201ENST00000359005 COL14A1Q05707 1796 aaKnown RBP14.19□□□□□ -0.14
TRAPPC4-201ENST00000359005 MON2Q7Z3U7 1717 aa14.19□□□□□ -0.14
TRAPPC4-201ENST00000359005 NRAPQ86VF7 1730 aa14.19□□□□□ -0.14
TRAPPC4-201ENST00000359005 SMG6Q86US8 1419 aaKnown RBP14.19□□□□□ -0.14
TRAPPC4-201ENST00000359005 FYB1O15117 783 aa14.19□□□□□ -0.14
TRAPPC4-201ENST00000359005 PELP1Q8IZL8 1130 aaKnown RBP14.19□□□□□ -0.14
TRAPPC4-201ENST00000359005 NWD2Q9ULI1 1742 aa14.18□□□□□ -0.14
TRAPPC4-201ENST00000359005 TTC21AQ8NDW8 1320 aa14.18□□□□□ -0.14
TRAPPC4-201ENST00000359005 TCP11L2Q8N4U5 519 aa14.18□□□□□ -0.14
TRAPPC4-201ENST00000359005 ADAMTS8Q9UP79 889 aa14.18□□□□□ -0.14
TRAPPC4-201ENST00000359005 NRKQ7Z2Y5 1582 aa14.17□□□□□ -0.14
TRAPPC4-201ENST00000359005 NEFMP07197 916 aa14.17□□□□□ -0.14
TRAPPC4-201ENST00000359005 MTHFSP49914 203 aa14.17□□□□□ -0.14
TRAPPC4-201ENST00000359005 NCBP3Q53F19 620 aaKnown RBP14.17□□□□□ -0.14
TRAPPC4-201ENST00000359005 ERICH6BQ5W0A0 696 aa14.17□□□□□ -0.14
TRAPPC4-201ENST00000359005 BARGINQ6ZT62 677 aa14.17□□□□□ -0.14
TRAPPC4-201ENST00000359005 GGNBP2Q9H3C7 697 aa14.17□□□□□ -0.14
TRAPPC4-201ENST00000359005 AATKQ6ZMQ8 1374 aa14.17□□□□□ -0.14
TRAPPC4-201ENST00000359005 TNNT2P45379 298 aaPredicted RBP14.16□□□□□ -0.14
TRAPPC4-201ENST00000359005 PHRF1Q9P1Y6 1649 aaKnown RBP14.15□□□□□ -0.14
TRAPPC4-201ENST00000359005 COL5A2P05997 1499 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC4-201ENST00000359005 FBLN1P23142 703 aa14.15□□□□□ -0.14
TRAPPC4-201ENST00000359005 EN1Q05925 392 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC4-201ENST00000359005 BRWD3Q6RI45 1802 aa14.15□□□□□ -0.14
TRAPPC4-201ENST00000359005 SLIT3O75094 1523 aa14.15□□□□□ -0.14
TRAPPC4-201ENST00000359005 USP31Q70CQ4 1352 aa14.13□□□□□ -0.15
TRAPPC4-201ENST00000359005 TRIM37O94972 964 aa14.13□□□□□ -0.15
TRAPPC4-201ENST00000359005 RUNDC1Q96C34 613 aa14.13□□□□□ -0.15
TRAPPC4-201ENST00000359005 LMO7Q8WWI1 1683 aa14.13□□□□□ -0.15
TRAPPC4-201ENST00000359005 PIK3C2AO00443 1686 aa14.12□□□□□ -0.15
TRAPPC4-201ENST00000359005 DIAPH1O60610 1272 aaKnown RBP14.12□□□□□ -0.15
TRAPPC4-201ENST00000359005 TOM1L2Q6ZVM7 507 aa14.12□□□□□ -0.15
TRAPPC4-201ENST00000359005 PTF1AQ7RTS3 328 aa14.12□□□□□ -0.15
TRAPPC4-201ENST00000359005 KCNH5Q8NCM2 988 aa14.12□□□□□ -0.15
TRAPPC4-201ENST00000359005 THSD7AQ9UPZ6 1657 aa14.11□□□□□ -0.15
TRAPPC4-201ENST00000359005 SF3B2Q13435 895 aaKnown RBP14.11□□□□□ -0.15
TRAPPC4-201ENST00000359005 FAM196AQ6ZSG2 479 aa14.11□□□□□ -0.15
TRAPPC4-201ENST00000359005 CRB1P82279 1406 aa14.1□□□□□ -0.15
TRAPPC4-201ENST00000359005 EZH2Q15910 746 aaKnown RBP14.1□□□□□ -0.15
TRAPPC4-201ENST00000359005 CAMKK2Q96RR4 588 aa14.1□□□□□ -0.15
TRAPPC4-201ENST00000359005 THRAP3Q9Y2W1 955 aaKnown RBP14.1□□□□□ -0.15
TRAPPC4-201ENST00000359005 WDR17Q8IZU2 1322 aa14.1□□□□□ -0.15
TRAPPC4-201ENST00000359005 U2AF1L5P0DN76 240 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC4-201ENST00000359005 U2AF1Q01081 240 aaKnown RBP eCLIP14.09□□□□□ -0.15
TRAPPC4-201ENST00000359005 GOLGA2Q08379 1002 aa14.09□□□□□ -0.15
TRAPPC4-201ENST00000359005 NFAT5O94916 1531 aa14.09□□□□□ -0.15
TRAPPC4-201ENST00000359005 MAPK8IP3Q9UPT6 1336 aa14.09□□□□□ -0.15
TRAPPC4-201ENST00000359005 PSDA5PKW4 1024 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC4-201ENST00000359005 BAG6P46379 1132 aa14.08□□□□□ -0.16
TRAPPC4-201ENST00000359005 MARCH10Q8NA82 808 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC4-201ENST00000359005 CARD10Q9BWT7 1032 aa14.08□□□□□ -0.16
TRAPPC4-201ENST00000359005 COL18A1P39060 1754 aa14.07□□□□□ -0.16
TRAPPC4-201ENST00000359005 APBA3O96018 575 aa14.07□□□□□ -0.16
TRAPPC4-201ENST00000359005 CSB-PGBD3P0DP91 1061 aa14.07□□□□□ -0.16
TRAPPC4-201ENST00000359005 SUPT16HQ9Y5B9 1047 aaKnown RBP14.07□□□□□ -0.16
TRAPPC4-201ENST00000359005 U2SURPO15042 1029 aaKnown RBP14.06□□□□□ -0.16
TRAPPC4-201ENST00000359005 FCHSD2O94868 740 aa14.06□□□□□ -0.16
TRAPPC4-201ENST00000359005 FKBP8Q14318 412 aa14.06□□□□□ -0.16
TRAPPC4-201ENST00000359005 CCDC27Q2M243 656 aa14.06□□□□□ -0.16
TRAPPC4-201ENST00000359005 KIF24Q5T7B8 1368 aa14.06□□□□□ -0.16
TRAPPC4-201ENST00000359005 E9PSI1 815 aa14.05□□□□□ -0.16
TRAPPC4-201ENST00000359005 APAF1O14727 1248 aa14.05□□□□□ -0.16
TRAPPC4-201ENST00000359005 POLKQ9UBT6 870 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms