RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 ALDH1L2Q3SY69 923 aa10.32□□□□□ -0.76
CD46-205ENST00000358170 NGDNQ8NEJ9 315 aaKnown RBP10.32□□□□□ -0.76
CD46-205ENST00000358170 PIK3C2BO00750 1634 aa10.32□□□□□ -0.76
CD46-205ENST00000358170 DIP2CQ9Y2E4 1556 aa10.32□□□□□ -0.76
CD46-205ENST00000358170 SIRT2Q8IXJ6 389 aa10.32□□□□□ -0.76
CD46-205ENST00000358170 OTUD7AQ8TE49 926 aaPredicted RBP10.32□□□□□ -0.76
CD46-205ENST00000358170 ANTXR1Q9H6X2 564 aa10.32□□□□□ -0.76
CD46-205ENST00000358170 TSPOAP1O95153 1857 aa10.32□□□□□ -0.76
CD46-205ENST00000358170 CD163L1Q9NR16 1453 aa10.32□□□□□ -0.76
CD46-205ENST00000358170 SLC4A2P04920 1241 aa10.31□□□□□ -0.76
CD46-205ENST00000358170 EIF4A2Q14240 407 aaKnown RBP10.31□□□□□ -0.76
CD46-205ENST00000358170 CFAP44Q96MT7 982 aa10.31□□□□□ -0.76
CD46-205ENST00000358170 IFT57Q9NWB7 429 aa10.31□□□□□ -0.76
CD46-205ENST00000358170 MCM4P33991 863 aa10.31□□□□□ -0.76
CD46-205ENST00000358170 CHMP5Q9NZZ3 219 aa10.31□□□□□ -0.76
CD46-205ENST00000358170 ACEP12821 1306 aa10.31□□□□□ -0.76
CD46-205ENST00000358170 MYO3AQ8NEV4 1616 aa10.31□□□□□ -0.76
CD46-205ENST00000358170 AMPHP49418 695 aa10.31□□□□□ -0.76
CD46-205ENST00000358170 TBC1D9Q6ZT07 1266 aa10.31□□□□□ -0.76
CD46-205ENST00000358170 ARHGEF28Q8N1W1 1705 aaKnown RBP10.3□□□□□ -0.76
CD46-205ENST00000358170 PRR36Q9H6K5 1346 aa10.3□□□□□ -0.76
CD46-205ENST00000358170 RTF1Q92541 710 aaKnown RBP10.3□□□□□ -0.76
CD46-205ENST00000358170 ZNF428Q96B54 188 aa10.3□□□□□ -0.76
CD46-205ENST00000358170 MYO5BQ9ULV0 1848 aa10.3□□□□□ -0.76
CD46-205ENST00000358170 LMOD3Q0VAK6 560 aa10.3□□□□□ -0.76
CD46-205ENST00000358170 TSHZ3Q63HK5 1081 aa10.3□□□□□ -0.76
CD46-205ENST00000358170 API5Q9BZZ5 524 aaKnown RBP10.3□□□□□ -0.76
CD46-205ENST00000358170 NEURL4Q96JN8 1562 aa10.3□□□□□ -0.76
CD46-205ENST00000358170 TRAK2O60296 914 aa10.29□□□□□ -0.76
CD46-205ENST00000358170 CD2BP2O95400 341 aaKnown RBP10.29□□□□□ -0.76
CD46-205ENST00000358170 HDGFP51858 240 aaKnown RBP10.29□□□□□ -0.76
CD46-205ENST00000358170 TPRNQ4KMQ1 711 aa10.29□□□□□ -0.76
CD46-205ENST00000358170 FOXD4L5Q5VV16 416 aaPredicted RBP10.29□□□□□ -0.76
CD46-205ENST00000358170 FOXD4L4Q8WXT5 416 aaPredicted RBP10.29□□□□□ -0.76
CD46-205ENST00000358170 ZC3H13Q5T200 1668 aaKnown RBP10.29□□□□□ -0.76
CD46-205ENST00000358170 ARHGAP31Q2M1Z3 1444 aa10.29□□□□□ -0.76
CD46-205ENST00000358170 ALKQ9UM73 1620 aa10.29□□□□□ -0.76
CD46-205ENST00000358170 NCLP19338 710 aaKnown RBP10.29□□□□□ -0.76
CD46-205ENST00000358170 NOL8Q76FK4 1167 aaKnown RBP10.29□□□□□ -0.76
CD46-205ENST00000358170 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.29□□□□□ -0.76
CD46-205ENST00000358170 MEIS3Q99687 375 aa10.29□□□□□ -0.76
CD46-205ENST00000358170 PANK2Q9BZ23 570 aa10.29□□□□□ -0.76
CD46-205ENST00000358170 TSPYL4Q9UJ04 414 aa10.29□□□□□ -0.76
CD46-205ENST00000358170 PNPLA6Q8IY17 1366 aa10.28□□□□□ -0.76
CD46-205ENST00000358170 LTKP29376 864 aa10.28□□□□□ -0.76
CD46-205ENST00000358170 GCC1Q96CN9 775 aa10.28□□□□□ -0.76
CD46-205ENST00000358170 ZMYM3Q14202 1370 aa10.28□□□□□ -0.76
CD46-205ENST00000358170 GOLGA6L3A6NEY3 463 aa10.28□□□□□ -0.76
CD46-205ENST00000358170 G2E3Q7L622 706 aa10.28□□□□□ -0.76
CD46-205ENST00000358170 ARHGEF40Q8TER5 1519 aa10.27□□□□□ -0.76
CD46-205ENST00000358170 TTC21BQ7Z4L5 1316 aa10.27□□□□□ -0.76
CD46-205ENST00000358170 NLRP6P59044 892 aa10.27□□□□□ -0.77
CD46-205ENST00000358170 COL3A1P02461 1466 aaPredicted RBP10.27□□□□□ -0.77
CD46-205ENST00000358170 ZFYVE9O95405 1425 aa10.27□□□□□ -0.77
CD46-205ENST00000358170 LRRC7Q96NW7 1537 aa10.27□□□□□ -0.77
CD46-205ENST00000358170 LMOD2Q6P5Q4 547 aa10.27□□□□□ -0.77
CD46-205ENST00000358170 USHBP1Q8N6Y0 703 aa10.27□□□□□ -0.77
CD46-205ENST00000358170 CHMP4BQ9H444 224 aaKnown RBP10.27□□□□□ -0.77
CD46-205ENST00000358170 NLRP1Q9C000 1473 aa10.27□□□□□ -0.77
CD46-205ENST00000358170 BMP2KLQ5H9B9 411 aa10.26□□□□□ -0.77
CD46-205ENST00000358170 ZNF692Q9BU19 519 aaPredicted RBP10.26□□□□□ -0.77
CD46-205ENST00000358170 CFAP74Q9C0B2 1584 aa10.26□□□□□ -0.77
CD46-205ENST00000358170 EXOC6BQ9Y2D4 811 aa10.26□□□□□ -0.77
CD46-205ENST00000358170 FAM135BQ49AJ0 1406 aa10.26□□□□□ -0.77
CD46-205ENST00000358170 A2ML1A8K2U0 1454 aa10.25□□□□□ -0.77
CD46-205ENST00000358170 ZNF853P0CG23 659 aa10.25□□□□□ -0.77
CD46-205ENST00000358170 TNPO1Q92973 898 aaKnown RBP10.25□□□□□ -0.77
CD46-205ENST00000358170 AMOTL2Q9Y2J4 779 aa10.25□□□□□ -0.77
CD46-205ENST00000358170 GSPT1P15170 499 aaKnown RBP10.25□□□□□ -0.77
CD46-205ENST00000358170 FKBP5Q13451 457 aaPredicted RBP10.25□□□□□ -0.77
CD46-205ENST00000358170 MTHFSDQ2M296 383 aaKnown RBP10.25□□□□□ -0.77
CD46-205ENST00000358170 FOXD4L6Q3SYB3 417 aaPredicted RBP10.25□□□□□ -0.77
CD46-205ENST00000358170 NCBP3Q53F19 620 aaKnown RBP10.25□□□□□ -0.77
CD46-205ENST00000358170 FOXD4L3Q6VB84 417 aaPredicted RBP10.25□□□□□ -0.77
CD46-205ENST00000358170 ROBO2Q9HCK4 1378 aa10.25□□□□□ -0.77
CD46-205ENST00000358170 CDC45O75419 566 aa10.25□□□□□ -0.77
CD46-205ENST00000358170 EIF2S2P20042 333 aaKnown RBP10.25□□□□□ -0.77
CD46-205ENST00000358170 PLEKHM2Q8IWE5 1019 aa10.25□□□□□ -0.77
CD46-205ENST00000358170 TMEM131LA2VDJ0 1609 aa10.24□□□□□ -0.77
CD46-205ENST00000358170 ARHGAP45Q92619 1136 aa10.24□□□□□ -0.77
CD46-205ENST00000358170 EID1Q9Y6B2 187 aa10.24□□□□□ -0.77
CD46-205ENST00000358170 EDC4Q6P2E9 1401 aaKnown RBP10.24□□□□□ -0.77
CD46-205ENST00000358170 XRCC6P12956 609 aaKnown RBP eCLIP10.24□□□□□ -0.77
CD46-205ENST00000358170 SSFA2P28290 1259 aa10.24□□□□□ -0.77
CD46-205ENST00000358170 GAS2L2Q8NHY3 880 aa10.23□□□□□ -0.77
CD46-205ENST00000358170 MAP3K19Q56UN5 1328 aa10.23□□□□□ -0.77
CD46-205ENST00000358170 CPS1P31327 1500 aa10.23□□□□□ -0.77
CD46-205ENST00000358170 TRIM6-TRIM34B2RNG4 842 aa10.23□□□□□ -0.77
CD46-205ENST00000358170 L1TD1Q5T7N2 865 aaKnown RBP10.23□□□□□ -0.77
CD46-205ENST00000358170 RILPL2Q969X0 211 aa10.23□□□□□ -0.77
CD46-205ENST00000358170 STK31Q9BXU1 1019 aa10.23□□□□□ -0.77
CD46-205ENST00000358170 ABCC4O15439 1325 aa10.23□□□□□ -0.77
CD46-205ENST00000358170 PREX1Q8TCU6 1659 aa10.22□□□□□ -0.77
CD46-205ENST00000358170 CHAMP1Q96JM3 812 aa10.22□□□□□ -0.77
CD46-205ENST00000358170 SDSP20132 328 aa10.22□□□□□ -0.77
CD46-205ENST00000358170 ADGRB2O60241 1585 aa10.22□□□□□ -0.77
CD46-205ENST00000358170 MAP2P11137 1827 aaKnown RBP10.22□□□□□ -0.77
CD46-205ENST00000358170 K7ELQ4 463 aaPredicted RBP10.22□□□□□ -0.77
CD46-205ENST00000358170 CHL1O00533 1208 aa10.22□□□□□ -0.77
CD46-205ENST00000358170 RBM25P49756 843 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms