RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 ANP32AP39687 249 aaKnown RBP18.61■□□□□ 0.57
NIPAL3-203ENST00000358028 ZNF772Q68DY9 489 aaPredicted RBP18.61■□□□□ 0.57
NIPAL3-203ENST00000358028 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.61■□□□□ 0.57
NIPAL3-203ENST00000358028 RUNDC1Q96C34 613 aa18.6■□□□□ 0.57
NIPAL3-203ENST00000358028 PIK3C2AO00443 1686 aa18.6■□□□□ 0.57
NIPAL3-203ENST00000358028 CPSF1Q10570 1443 aaKnown RBP18.6■□□□□ 0.57
NIPAL3-203ENST00000358028 PHRF1Q9P1Y6 1649 aaKnown RBP18.6■□□□□ 0.57
NIPAL3-203ENST00000358028 PAK3O75914 559 aaPredicted RBP18.6■□□□□ 0.57
NIPAL3-203ENST00000358028 C20orf194Q5TEA3 1177 aa18.6■□□□□ 0.57
NIPAL3-203ENST00000358028 LMOD2Q6P5Q4 547 aa18.6■□□□□ 0.57
NIPAL3-203ENST00000358028 ARHGEF10O15013 1369 aa18.59■□□□□ 0.57
NIPAL3-203ENST00000358028 TERF2IPQ9NYB0 399 aa18.58■□□□□ 0.57
NIPAL3-203ENST00000358028 NOP58Q9Y2X3 529 aaKnown RBP18.58■□□□□ 0.57
NIPAL3-203ENST00000358028 KIF20BQ96Q89 1820 aa18.58■□□□□ 0.56
NIPAL3-203ENST00000358028 PLEKHG5O94827 1062 aa18.58■□□□□ 0.56
NIPAL3-203ENST00000358028 WWC1Q8IX03 1113 aa18.58■□□□□ 0.56
NIPAL3-203ENST00000358028 SSH2Q76I76 1423 aa18.57■□□□□ 0.56
NIPAL3-203ENST00000358028 AFF2P51816 1311 aa18.57■□□□□ 0.56
NIPAL3-203ENST00000358028 CABLES1Q8TDN4 633 aa18.55■□□□□ 0.56
NIPAL3-203ENST00000358028 IPO9Q96P70 1041 aaKnown RBP18.55■□□□□ 0.56
NIPAL3-203ENST00000358028 ADAMTS2O95450 1211 aa18.54■□□□□ 0.56
NIPAL3-203ENST00000358028 HDGFL2Q7Z4V5 671 aaPredicted RBP18.54■□□□□ 0.56
NIPAL3-203ENST00000358028 TCP11L2Q8N4U5 519 aa18.54■□□□□ 0.56
NIPAL3-203ENST00000358028 C8orf37Q96NL8 207 aa18.54■□□□□ 0.56
NIPAL3-203ENST00000358028 COL3A1P02461 1466 aaPredicted RBP18.53■□□□□ 0.56
NIPAL3-203ENST00000358028 CDK12Q9NYV4 1490 aaPredicted RBP18.53■□□□□ 0.56
NIPAL3-203ENST00000358028 NUTM2GQ5VZR2 741 aa18.53■□□□□ 0.56
NIPAL3-203ENST00000358028 GGNBP2Q9H3C7 697 aa18.53■□□□□ 0.56
NIPAL3-203ENST00000358028 ZNF692Q9BU19 519 aaPredicted RBP18.53■□□□□ 0.56
NIPAL3-203ENST00000358028 PLCH1Q4KWH8 1693 aa18.52■□□□□ 0.56
NIPAL3-203ENST00000358028 NCBP3Q53F19 620 aaKnown RBP18.52■□□□□ 0.55
NIPAL3-203ENST00000358028 RRP7AQ9Y3A4 280 aaKnown RBP18.52■□□□□ 0.55
NIPAL3-203ENST00000358028 USP54Q70EL1 1684 aa18.51■□□□□ 0.55
NIPAL3-203ENST00000358028 FYB1O15117 783 aa18.51■□□□□ 0.55
NIPAL3-203ENST00000358028 CCDC27Q2M243 656 aa18.51■□□□□ 0.55
NIPAL3-203ENST00000358028 ABTB2Q8N961 1025 aa18.51■□□□□ 0.55
NIPAL3-203ENST00000358028 WDR63Q8IWG1 891 aa18.5■□□□□ 0.55
NIPAL3-203ENST00000358028 TTC21BQ7Z4L5 1316 aa18.5■□□□□ 0.55
NIPAL3-203ENST00000358028 EDC4Q6P2E9 1401 aaKnown RBP18.5■□□□□ 0.55
NIPAL3-203ENST00000358028 U2AF1L5P0DN76 240 aaPredicted RBP18.5■□□□□ 0.55
NIPAL3-203ENST00000358028 RXRBP28702 533 aa18.5■□□□□ 0.55
NIPAL3-203ENST00000358028 U2AF1Q01081 240 aaKnown RBP eCLIP18.5■□□□□ 0.55
NIPAL3-203ENST00000358028 NEUROD2Q15784 382 aa18.5■□□□□ 0.55
NIPAL3-203ENST00000358028 KDM2BQ8NHM5 1336 aa18.49■□□□□ 0.55
NIPAL3-203ENST00000358028 BCAR3O75815 825 aa18.49■□□□□ 0.55
NIPAL3-203ENST00000358028 PDE4AP27815 886 aa18.49■□□□□ 0.55
NIPAL3-203ENST00000358028 HAP1P54257 671 aaPredicted RBP18.49■□□□□ 0.55
NIPAL3-203ENST00000358028 BACH2Q9BYV9 841 aa18.49■□□□□ 0.55
NIPAL3-203ENST00000358028 CENPQQ7L2Z9 268 aaPredicted RBP18.48■□□□□ 0.55
NIPAL3-203ENST00000358028 NGLY1Q96IV0 654 aa18.48■□□□□ 0.55
NIPAL3-203ENST00000358028 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.47■□□□□ 0.55
NIPAL3-203ENST00000358028 FNBP4Q8N3X1 1017 aaPredicted RBP18.47■□□□□ 0.55
NIPAL3-203ENST00000358028 SLIT3O75094 1523 aa18.47■□□□□ 0.55
NIPAL3-203ENST00000358028 USP19O94966 1318 aa18.47■□□□□ 0.55
NIPAL3-203ENST00000358028 TTC21AQ8NDW8 1320 aa18.47■□□□□ 0.55
NIPAL3-203ENST00000358028 NWD2Q9ULI1 1742 aa18.47■□□□□ 0.55
NIPAL3-203ENST00000358028 COL14A1Q05707 1796 aaKnown RBP18.46■□□□□ 0.55
NIPAL3-203ENST00000358028 QTRT2Q9H974 415 aaKnown RBP18.46■□□□□ 0.55
NIPAL3-203ENST00000358028 ZBTB47Q9UFB7 747 aaPredicted RBP18.46■□□□□ 0.55
NIPAL3-203ENST00000358028 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.46■□□□□ 0.55
NIPAL3-203ENST00000358028 RGS12O14924 1447 aa18.45■□□□□ 0.54
NIPAL3-203ENST00000358028 NRAPQ86VF7 1730 aa18.45■□□□□ 0.54
NIPAL3-203ENST00000358028 NLRP6P59044 892 aa18.45■□□□□ 0.54
NIPAL3-203ENST00000358028 RBM6P78332 1123 aaKnown RBP18.45■□□□□ 0.54
NIPAL3-203ENST00000358028 NME9Q86XW9 330 aa18.44■□□□□ 0.54
NIPAL3-203ENST00000358028 ZRANB1Q9UGI0 708 aa18.44■□□□□ 0.54
NIPAL3-203ENST00000358028 BCL9LQ86UU0 1499 aa18.43■□□□□ 0.54
NIPAL3-203ENST00000358028 ATRNO75882 1429 aa18.43■□□□□ 0.54
NIPAL3-203ENST00000358028 U2SURPO15042 1029 aaKnown RBP18.43■□□□□ 0.54
NIPAL3-203ENST00000358028 PDE3AQ14432 1141 aa18.43■□□□□ 0.54
NIPAL3-203ENST00000358028 USP21Q9UK80 565 aa18.43■□□□□ 0.54
NIPAL3-203ENST00000358028 LTN1O94822 1766 aa18.43■□□□□ 0.54
NIPAL3-203ENST00000358028 SLIT2O94813 1529 aa18.43■□□□□ 0.54
NIPAL3-203ENST00000358028 PLEKHF1Q96S99 279 aa18.42■□□□□ 0.54
NIPAL3-203ENST00000358028 MYH16Q9H6N6 1097 aa18.42■□□□□ 0.54
NIPAL3-203ENST00000358028 KIAA0232Q92628 1395 aa18.42■□□□□ 0.54
NIPAL3-203ENST00000358028 OVOS2A0A0J9YW53 1432 aa18.41■□□□□ 0.54
NIPAL3-203ENST00000358028 OVOS2Q6IE36 1432 aa18.41■□□□□ 0.54
NIPAL3-203ENST00000358028 NFAT5O94916 1531 aa18.41■□□□□ 0.54
NIPAL3-203ENST00000358028 LMO7Q8WWI1 1683 aa18.41■□□□□ 0.54
NIPAL3-203ENST00000358028 RGPD5Q99666 1765 aa18.4■□□□□ 0.54
NIPAL3-203ENST00000358028 USP31Q70CQ4 1352 aa18.4■□□□□ 0.54
NIPAL3-203ENST00000358028 DIAPH1O60610 1272 aaKnown RBP18.4■□□□□ 0.54
NIPAL3-203ENST00000358028 CANXP27824 592 aaKnown RBP18.4■□□□□ 0.54
NIPAL3-203ENST00000358028 RARSP54136 660 aaKnown RBP18.4■□□□□ 0.54
NIPAL3-203ENST00000358028 TRPC5Q9UL62 973 aaPredicted RBP18.4■□□□□ 0.54
NIPAL3-203ENST00000358028 FAM83GA6ND36 823 aa18.4■□□□□ 0.54
NIPAL3-203ENST00000358028 GCP02774 474 aa18.4■□□□□ 0.54
NIPAL3-203ENST00000358028 ZC3H6P61129 1189 aaKnown RBP18.4■□□□□ 0.54
NIPAL3-203ENST00000358028 MAPK8IP3Q9UPT6 1336 aa18.39■□□□□ 0.53
NIPAL3-203ENST00000358028 COL18A1P39060 1754 aa18.38■□□□□ 0.53
NIPAL3-203ENST00000358028 TMPOP42166 694 aaKnown RBP18.38■□□□□ 0.53
NIPAL3-203ENST00000358028 UPF1Q92900 1129 aaKnown RBP eCLIP18.38■□□□□ 0.53
NIPAL3-203ENST00000358028 EP400Q96L91 3159 aa18.37■□□□□ 0.53
NIPAL3-203ENST00000358028 SOX12O15370 315 aa18.37■□□□□ 0.53
NIPAL3-203ENST00000358028 CHRNA2Q15822 529 aa18.37■□□□□ 0.53
NIPAL3-203ENST00000358028 SKAP1Q86WV1 359 aa18.37■□□□□ 0.53
NIPAL3-203ENST00000358028 PRDM11Q9NQV5 511 aa18.37■□□□□ 0.53
NIPAL3-203ENST00000358028 CPDO75976 1380 aa18.37■□□□□ 0.53
NIPAL3-203ENST00000358028 PNNQ9H307 717 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms