RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 AIMP1Q12904 312 aaKnown RBP15.15■□□□□ 0.02
SMC4-202ENST00000357388 TAX1BP1Q86VP1 789 aa15.15■□□□□ 0.02
SMC4-202ENST00000357388 ERC1Q8IUD2 1116 aa15.15■□□□□ 0.02
SMC4-202ENST00000357388 BACH2Q9BYV9 841 aa15.15■□□□□ 0.02
SMC4-202ENST00000357388 ZSCAN12O43309 604 aa15.15■□□□□ 0.02
SMC4-202ENST00000357388 GOLGA6L10A0A0M3HER8 536 aa15.15■□□□□ 0.02
SMC4-202ENST00000357388 BRPF1P55201 1214 aaPredicted RBP15.15■□□□□ 0.02
SMC4-202ENST00000357388 GAS2L2Q8NHY3 880 aa15.15■□□□□ 0.02
SMC4-202ENST00000357388 FSD1Q9BTV5 496 aa15.15■□□□□ 0.02
SMC4-202ENST00000357388 PLEKHO1Q53GL0 409 aaPredicted RBP15.14■□□□□ 0.01
SMC4-202ENST00000357388 NLRP6P59044 892 aa15.14■□□□□ 0.01
SMC4-202ENST00000357388 JAKMIP3Q5VZ66 844 aa15.14■□□□□ 0.01
SMC4-202ENST00000357388 ZSCAN31Q96LW9 406 aaPredicted RBP15.14■□□□□ 0.01
SMC4-202ENST00000357388 CCDC7Q96M83 1385 aa15.13■□□□□ 0.01
SMC4-202ENST00000357388 TAF4BQ92750 862 aa15.13■□□□□ 0.01
SMC4-202ENST00000357388 CYP46A1Q9Y6A2 500 aa15.13■□□□□ 0.01
SMC4-202ENST00000357388 MCM5P33992 734 aa15.13■□□□□ 0.01
SMC4-202ENST00000357388 NUP62CLQ9H1M0 184 aa15.13■□□□□ 0.01
SMC4-202ENST00000357388 CFAP45Q9UL16 551 aa15.13■□□□□ 0.01
SMC4-202ENST00000357388 PDZRN3Q9UPQ7 1066 aa15.13■□□□□ 0.01
SMC4-202ENST00000357388 FAM193AP78312 1265 aa15.12■□□□□ 0.01
SMC4-202ENST00000357388 MAP2K1Q02750 393 aaPredicted RBP15.12■□□□□ 0.01
SMC4-202ENST00000357388 CCDC30Q5VVM6 783 aa15.12■□□□□ 0.01
SMC4-202ENST00000357388 EPB41L2O43491 1005 aaKnown RBP15.12■□□□□ 0.01
SMC4-202ENST00000357388 KIF18AQ8NI77 898 aa15.12■□□□□ 0.01
SMC4-202ENST00000357388 PANK1Q8TE04 598 aa15.12■□□□□ 0.01
SMC4-202ENST00000357388 POLR3GO15318 223 aaPredicted RBP15.11■□□□□ 0.01
SMC4-202ENST00000357388 SMG6Q86US8 1419 aaKnown RBP15.11■□□□□ 0.01
SMC4-202ENST00000357388 PTPN14Q15678 1187 aa15.11■□□□□ 0.01
SMC4-202ENST00000357388 NEMFO60524 1076 aa15.11■□□□□ 0.01
SMC4-202ENST00000357388 ARHGAP29Q52LW3 1261 aa15.11■□□□□ 0.01
SMC4-202ENST00000357388 UBE2Q2Q8WVN8 375 aa15.11■□□□□ 0.01
SMC4-202ENST00000357388 UPF3BQ9BZI7 483 aaKnown RBP15.11■□□□□ 0.01
SMC4-202ENST00000357388 IMMTQ16891 758 aaKnown RBP15.1■□□□□ 0.01
SMC4-202ENST00000357388 KRT18P05783 430 aaKnown RBP15.1■□□□□ 0.01
SMC4-202ENST00000357388 PPP6R1Q9UPN7 881 aa15.1■□□□□ 0.01
SMC4-202ENST00000357388 LRRFIP2Q9Y608 721 aaKnown RBP15.1■□□□□ 0.01
SMC4-202ENST00000357388 ME1P48163 572 aa15.09■□□□□ 0.01
SMC4-202ENST00000357388 SPATA24Q86W54 205 aa15.09■□□□□ 0.01
SMC4-202ENST00000357388 PROSER2Q86WR7 435 aaPredicted RBP15.09■□□□□ 0.01
SMC4-202ENST00000357388 RBM42Q9BTD8 480 aaKnown RBP15.09■□□□□ 0.01
SMC4-202ENST00000357388 NOL7Q9UMY1 257 aaKnown RBP15.09■□□□□ 0.01
SMC4-202ENST00000357388 TATP17735 454 aaPredicted RBP15.09■□□□□ 0.01
SMC4-202ENST00000357388 SMC1AQ14683 1233 aaKnown RBP15.09■□□□□ 0.01
SMC4-202ENST00000357388 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.09■□□□□ 0.015e-8■■■□□ 16.4
SMC4-202ENST00000357388 MTMR7Q9Y216 660 aa15.09■□□□□ 0.01
SMC4-202ENST00000357388 TRIM22Q8IYM9 498 aa15.09■□□□□ 0.01
SMC4-202ENST00000357388 STAMBPO95630 424 aa15.08■□□□□ 0
SMC4-202ENST00000357388 CCDC158Q5M9N0 1113 aa15.08■□□□□ 0
SMC4-202ENST00000357388 CCDC83Q8IWF9 413 aa15.08■□□□□ 0
SMC4-202ENST00000357388 SPATA32Q96LK8 384 aa15.08■□□□□ 0
SMC4-202ENST00000357388 CDKL5O76039 1030 aa15.08■□□□□ 0
SMC4-202ENST00000357388 MAP3K11Q16584 847 aa15.08■□□□□ 0
SMC4-202ENST00000357388 KIAA1328Q86T90 577 aa15.07■□□□□ 0
SMC4-202ENST00000357388 SRCIN1Q9C0H9 1055 aa15.07■□□□□ 0
SMC4-202ENST00000357388 CBX1P83916 185 aa15.07■□□□□ 0
SMC4-202ENST00000357388 HMOX1P09601 288 aa15.07■□□□□ 0
SMC4-202ENST00000357388 DESP17661 470 aa15.07■□□□□ 0
SMC4-202ENST00000357388 GIGYF2Q6Y7W6 1299 aaKnown RBP15.07■□□□□ 0
SMC4-202ENST00000357388 ZNF397Q8NF99 534 aaPredicted RBP15.07■□□□□ 0
SMC4-202ENST00000357388 NACAP1Q9BZK3 213 aa15.07■□□□□ 0
SMC4-202ENST00000357388 CNNM1Q9NRU3 951 aa15.07■□□□□ 0
SMC4-202ENST00000357388 GCOM1H8Y6P7 765 aaPredicted RBP15.06■□□□□ 0
SMC4-202ENST00000357388 MYZAPP0CAP1 466 aa15.06■□□□□ 0
SMC4-202ENST00000357388 ABTB2Q8N961 1025 aa15.06■□□□□ 0
SMC4-202ENST00000357388 MYOM3Q5VTT5 1437 aa15.06■□□□□ 0
SMC4-202ENST00000357388 DYNC1I1O14576 645 aa15.06■□□□□ 0
SMC4-202ENST00000357388 SFPQP23246 707 aaKnown RBP eCLIP15.06■□□□□ 0
SMC4-202ENST00000357388 KIF5CO60282 957 aa15.06■□□□□ 0
SMC4-202ENST00000357388 CASQ1P31415 396 aa15.06■□□□□ 0
SMC4-202ENST00000357388 CCDC57Q2TAC2 916 aa15.06■□□□□ 0
SMC4-202ENST00000357388 LARP1BQ659C4 914 aaKnown RBP15.06■□□□□ 0
SMC4-202ENST00000357388 LUZP1Q86V48 1076 aa15.06■□□□□ 0
SMC4-202ENST00000357388 PPP1R1BQ9UD71 204 aaPredicted RBP15.06■□□□□ 0
SMC4-202ENST00000357388 FAM177A1Q8N128 213 aaPredicted RBP15.06■□□□□ 0
SMC4-202ENST00000357388 PNISRQ8TF01 805 aaKnown RBP15.06■□□□□ 0
SMC4-202ENST00000357388 CETN2P41208 172 aa15.06■□□□□ 0
SMC4-202ENST00000357388 PPM1EQ8WY54 764 aa15.06■□□□□ 0
SMC4-202ENST00000357388 ESCO1Q5FWF5 840 aa15.05■□□□□ -0
SMC4-202ENST00000357388 TIGD1Q96MW7 591 aa15.05■□□□□ -0
SMC4-202ENST00000357388 TANGO6Q9C0B7 1094 aa15.05■□□□□ -0
SMC4-202ENST00000357388 FAM177BA6PVY3 158 aa15.04■□□□□ -0
SMC4-202ENST00000357388 TTC39AQ5SRH9 613 aa15.04■□□□□ -0
SMC4-202ENST00000357388 SURF6O75683 361 aaKnown RBP15.04■□□□□ -0
SMC4-202ENST00000357388 PRIMPOLQ96LW4 560 aa15.04■□□□□ -0
SMC4-202ENST00000357388 DNAJC2Q99543 621 aaKnown RBP15.04■□□□□ -0
SMC4-202ENST00000357388 NF2P35240 595 aa15.04■□□□□ -0
SMC4-202ENST00000357388 TICAM2Q86XR7 235 aa15.04■□□□□ -0
SMC4-202ENST00000357388 PLEKHH1Q9ULM0 1364 aa15.04■□□□□ -0
SMC4-202ENST00000357388 SCAPERQ9BY12 1400 aa15.04■□□□□ -0
SMC4-202ENST00000357388 KRT32Q14532 448 aa15.03■□□□□ -0
SMC4-202ENST00000357388 GOLGA6L9A6NEM1 432 aa15.03■□□□□ -0
SMC4-202ENST00000357388 BMS1Q14692 1282 aaKnown RBP15.03■□□□□ -0
SMC4-202ENST00000357388 ZSCAN25Q6NSZ9 544 aa15.03■□□□□ -0
SMC4-202ENST00000357388 NUTM2GQ5VZR2 741 aa15.03■□□□□ -0
SMC4-202ENST00000357388 BMP2KQ9NSY1 1161 aaPredicted RBP15.03■□□□□ -0
SMC4-202ENST00000357388 GGNBP2Q9H3C7 697 aa15.03■□□□□ -0
SMC4-202ENST00000357388 GNAI2P04899 355 aa15.03■□□□□ -0
SMC4-202ENST00000357388 SPA17Q15506 151 aa15.03■□□□□ -0
SMC4-202ENST00000357388 CCDC183Q5T5S1 534 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms