RNA–Protein interactions for RNA: ENST00000357248.8

SMARCA2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMARCA2, Length 5,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-204ENST00000357248 STIM1Q13586 685 aa16.42■□□□□ 0.22
SMARCA2-204ENST00000357248 JPH4Q96JJ6 628 aa16.42■□□□□ 0.22
SMARCA2-204ENST00000357248 STK38Q15208 465 aa16.42■□□□□ 0.22
SMARCA2-204ENST00000357248 TANGO6Q9C0B7 1094 aa16.42■□□□□ 0.22
SMARCA2-204ENST00000357248 DISP1Q96F81 1524 aa16.42■□□□□ 0.22
SMARCA2-204ENST00000357248 NUP153P49790 1475 aaKnown RBP16.42■□□□□ 0.22
SMARCA2-204ENST00000357248 SF3B2Q13435 895 aaKnown RBP16.42■□□□□ 0.22
SMARCA2-204ENST00000357248 MTERF4Q7Z6M4 381 aaKnown RBP16.42■□□□□ 0.22
SMARCA2-204ENST00000357248 RUNDC1Q96C34 613 aa16.42■□□□□ 0.22
SMARCA2-204ENST00000357248 NASPP49321 788 aaPredicted RBP16.42■□□□□ 0.22
SMARCA2-204ENST00000357248 RNF214Q8ND24 703 aa16.42■□□□□ 0.22
SMARCA2-204ENST00000357248 ITSN2Q9NZM3 1697 aa16.41■□□□□ 0.22
SMARCA2-204ENST00000357248 ABCC5O15440 1437 aa16.41■□□□□ 0.22
SMARCA2-204ENST00000357248 KIAA0754O94854 1291 aa16.41■□□□□ 0.22
SMARCA2-204ENST00000357248 HIP1O00291 1037 aa16.41■□□□□ 0.22
SMARCA2-204ENST00000357248 RABEP1Q15276 862 aa16.41■□□□□ 0.22
SMARCA2-204ENST00000357248 DNMT1P26358 1616 aaKnown RBP16.41■□□□□ 0.22
SMARCA2-204ENST00000357248 PDCP20941 246 aa16.41■□□□□ 0.22
SMARCA2-204ENST00000357248 TAX1BP1Q86VP1 789 aa16.41■□□□□ 0.22
SMARCA2-204ENST00000357248 JMYQ8N9B5 988 aa16.4■□□□□ 0.22
SMARCA2-204ENST00000357248 MPHOSPH10O00566 681 aaKnown RBP16.4■□□□□ 0.22
SMARCA2-204ENST00000357248 EIF4G3O43432 1585 aaKnown RBP16.4■□□□□ 0.22
SMARCA2-204ENST00000357248 TTC39AQ5SRH9 613 aa16.4■□□□□ 0.22
SMARCA2-204ENST00000357248 PPFIBP1Q86W92 1011 aa16.4■□□□□ 0.22
SMARCA2-204ENST00000357248 HMOX1P09601 288 aa16.39■□□□□ 0.21
SMARCA2-204ENST00000357248 RBM42Q9BTD8 480 aaKnown RBP16.39■□□□□ 0.21
SMARCA2-204ENST00000357248 DACH1Q9UI36 760 aa16.39■□□□□ 0.21
SMARCA2-204ENST00000357248 GBP2P32456 591 aaPredicted RBP16.39■□□□□ 0.21
SMARCA2-204ENST00000357248 SOGA3Q5TF21 947 aa16.39■□□□□ 0.21
SMARCA2-204ENST00000357248 CNNM1Q9NRU3 951 aa16.39■□□□□ 0.21
SMARCA2-204ENST00000357248 SERPINC1P01008 464 aa16.39■□□□□ 0.21
SMARCA2-204ENST00000357248 CCDC158Q5M9N0 1113 aa16.38■□□□□ 0.21
SMARCA2-204ENST00000357248 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.38■□□□□ 0.217e-7■■■■■ 31.5
SMARCA2-204ENST00000357248 DHX8Q14562 1220 aaKnown RBP16.38■□□□□ 0.21
SMARCA2-204ENST00000357248 MBD3O95983 291 aa16.37■□□□□ 0.21
SMARCA2-204ENST00000357248 TSPY26PQ9H489 355 aa16.37■□□□□ 0.21
SMARCA2-204ENST00000357248 SEPT11Q9NVA2 429 aaKnown RBP16.37■□□□□ 0.21
SMARCA2-204ENST00000357248 SURF6O75683 361 aaKnown RBP16.37■□□□□ 0.21
SMARCA2-204ENST00000357248 GNAI3P08754 354 aa16.37■□□□□ 0.21
SMARCA2-204ENST00000357248 TRIM22Q8IYM9 498 aa16.37■□□□□ 0.21
SMARCA2-204ENST00000357248 CCDC112Q8NEF3 446 aa16.37■□□□□ 0.21
SMARCA2-204ENST00000357248 ANKRD30BQ9BXX2 1392 aa16.37■□□□□ 0.21
SMARCA2-204ENST00000357248 MRE11P49959 708 aa16.37■□□□□ 0.21
SMARCA2-204ENST00000357248 TRIM21P19474 475 aaKnown RBP16.37■□□□□ 0.21
SMARCA2-204ENST00000357248 RPRD2Q5VT52 1461 aaKnown RBP16.36■□□□□ 0.21
SMARCA2-204ENST00000357248 NACAP1Q9BZK3 213 aa16.36■□□□□ 0.21
SMARCA2-204ENST00000357248 CNTLNQ9NXG0 1405 aa16.36■□□□□ 0.21
SMARCA2-204ENST00000357248 MATR3P43243 847 aaKnown RBP eCLIP16.36■□□□□ 0.21
SMARCA2-204ENST00000357248 PPM1FP49593 454 aaPredicted RBP16.36■□□□□ 0.21
SMARCA2-204ENST00000357248 INCENPQ9NQS7 918 aa16.36■□□□□ 0.21
SMARCA2-204ENST00000357248 ZBED9Q6R2W3 1325 aa16.36■□□□□ 0.21
SMARCA2-204ENST00000357248 CENPHQ9H3R5 247 aa16.36■□□□□ 0.21
SMARCA2-204ENST00000357248 CAMSAP2Q08AD1 1489 aa16.36■□□□□ 0.21
SMARCA2-204ENST00000357248 CCDC30Q5VVM6 783 aa16.35■□□□□ 0.21
SMARCA2-204ENST00000357248 RBM5P52756 815 aaKnown RBP eCLIP16.35■□□□□ 0.21
SMARCA2-204ENST00000357248 CEBPZQ03701 1054 aaKnown RBP16.35■□□□□ 0.21
SMARCA2-204ENST00000357248 ERC1Q8IUD2 1116 aa16.35■□□□□ 0.21
SMARCA2-204ENST00000357248 AAMPQ13685 434 aa16.35■□□□□ 0.21
SMARCA2-204ENST00000357248 NUTM2GQ5VZR2 741 aa16.35■□□□□ 0.21
SMARCA2-204ENST00000357248 BMP2KQ9NSY1 1161 aaPredicted RBP16.34■□□□□ 0.21
SMARCA2-204ENST00000357248 ERLIN1O75477 346 aa16.34■□□□□ 0.21
SMARCA2-204ENST00000357248 PRG4Q92954 1404 aaPredicted RBP16.34■□□□□ 0.21
SMARCA2-204ENST00000357248 CCDC69A6NI79 296 aa16.34■□□□□ 0.21
SMARCA2-204ENST00000357248 MCM2P49736 904 aa16.34■□□□□ 0.21
SMARCA2-204ENST00000357248 CAVIN1Q6NZI2 390 aaKnown RBP16.34■□□□□ 0.21
SMARCA2-204ENST00000357248 NOL7Q9UMY1 257 aaKnown RBP16.33■□□□□ 0.2
SMARCA2-204ENST00000357248 CCDC57Q2TAC2 916 aa16.33■□□□□ 0.2
SMARCA2-204ENST00000357248 IBSPP21815 317 aaPredicted RBP16.32■□□□□ 0.2
SMARCA2-204ENST00000357248 PRKRIP1Q9H875 184 aaPredicted RBP16.32■□□□□ 0.2
SMARCA2-204ENST00000357248 NUP160Q12769 1436 aa16.32■□□□□ 0.2
SMARCA2-204ENST00000357248 CCDC7Q96M83 1385 aa16.32■□□□□ 0.2
SMARCA2-204ENST00000357248 NEK4P51957 841 aa16.32■□□□□ 0.2
SMARCA2-204ENST00000357248 NLRP6P59044 892 aa16.32■□□□□ 0.2
SMARCA2-204ENST00000357248 IQCEQ6IPM2 695 aa16.32■□□□□ 0.2
SMARCA2-204ENST00000357248 KIAA1107Q9UPP5 1409 aa16.32■□□□□ 0.2
SMARCA2-204ENST00000357248 FIBPO43427 364 aa16.32■□□□□ 0.2
SMARCA2-204ENST00000357248 SSBP05455 408 aaKnown RBP eCLIP16.32■□□□□ 0.2
SMARCA2-204ENST00000357248 USP47Q96K76 1375 aa16.32■□□□□ 0.2
SMARCA2-204ENST00000357248 EIF3JO75822 258 aaKnown RBP16.32■□□□□ 0.2
SMARCA2-204ENST00000357248 DNAI2Q9GZS0 605 aa16.31■□□□□ 0.2
SMARCA2-204ENST00000357248 PLEKHO1Q53GL0 409 aaPredicted RBP16.31■□□□□ 0.2
SMARCA2-204ENST00000357248 HMGN5P82970 282 aaKnown RBP16.31■□□□□ 0.2
SMARCA2-204ENST00000357248 STK11IPQ8N1F8 1099 aa16.31■□□□□ 0.2
SMARCA2-204ENST00000357248 SSR1P43307 286 aaKnown RBP16.31■□□□□ 0.2
SMARCA2-204ENST00000357248 ADGRL2O95490 1459 aa16.3■□□□□ 0.2
SMARCA2-204ENST00000357248 ZNF644Q9H582 1327 aaPredicted RBP16.3■□□□□ 0.2
SMARCA2-204ENST00000357248 ANKRD50Q9ULJ7 1429 aa16.3■□□□□ 0.2
SMARCA2-204ENST00000357248 ZNF76P36508 570 aa16.3■□□□□ 0.2
SMARCA2-204ENST00000357248 GAS2L2Q8NHY3 880 aa16.3■□□□□ 0.2
SMARCA2-204ENST00000357248 NCOA1Q15788 1441 aa16.3■□□□□ 0.2
SMARCA2-204ENST00000357248 GPATCH8Q9UKJ3 1502 aaKnown RBP16.3■□□□□ 0.2
SMARCA2-204ENST00000357248 KIF14Q15058 1648 aa16.3■□□□□ 0.2
SMARCA2-204ENST00000357248 POTEJP0CG39 1038 aa16.3■□□□□ 0.2
SMARCA2-204ENST00000357248 JAKMIP3Q5VZ66 844 aa16.3■□□□□ 0.2
SMARCA2-204ENST00000357248 SPC24Q8NBT2 197 aa16.3■□□□□ 0.2
SMARCA2-204ENST00000357248 NUP133Q8WUM0 1156 aa16.3■□□□□ 0.2
SMARCA2-204ENST00000357248 CBFA2T2O43439 604 aa16.3■□□□□ 0.2
SMARCA2-204ENST00000357248 GPRASP1Q5JY77 1395 aa16.3■□□□□ 0.2
SMARCA2-204ENST00000357248 ZSCAN29Q8IWY8 852 aaPredicted RBP16.3■□□□□ 0.2
SMARCA2-204ENST00000357248 PRPF40AO75400 957 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms