RNA–Protein interactions for RNA: ENST00000356654.8

ATN1-201, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,351 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-201ENST00000356654 ANKRD36BQ8N2N9 1353 aa17.06■□□□□ 0.32
ATN1-201ENST00000356654 ABCC11Q96J66 1382 aa17.06■□□□□ 0.32
ATN1-201ENST00000356654 SF3A1Q15459 793 aaKnown RBP17.06■□□□□ 0.32
ATN1-201ENST00000356654 NRDCO43847 1150 aa17.06■□□□□ 0.32
ATN1-201ENST00000356654 NEK4P51957 841 aa17.06■□□□□ 0.32
ATN1-201ENST00000356654 FSD1Q9BTV5 496 aa17.06■□□□□ 0.32
ATN1-201ENST00000356654 KIF3AQ9Y496 699 aa17.06■□□□□ 0.32
ATN1-201ENST00000356654 NSD2O96028 1365 aa17.06■□□□□ 0.32
ATN1-201ENST00000356654 LRRFIP1Q32MZ4 808 aaKnown RBP17.05■□□□□ 0.32
ATN1-201ENST00000356654 MEX3CQ5U5Q3 659 aaKnown RBP17.05■□□□□ 0.32
ATN1-201ENST00000356654 MCTP1Q6DN14 999 aa17.05■□□□□ 0.32
ATN1-201ENST00000356654 RNF20Q5VTR2 975 aa17.05■□□□□ 0.32
ATN1-201ENST00000356654 LRRCC1Q9C099 1032 aa17.05■□□□□ 0.32
ATN1-201ENST00000356654 TAF7Q15545 349 aaPredicted RBP17.05■□□□□ 0.32
ATN1-201ENST00000356654 RIMS2Q9UQ26 1411 aa17.05■□□□□ 0.32
ATN1-201ENST00000356654 POLKQ9UBT6 870 aa17.05■□□□□ 0.32
ATN1-201ENST00000356654 TTC21BQ7Z4L5 1316 aa17.04■□□□□ 0.32
ATN1-201ENST00000356654 PTCD1O75127 700 aaKnown RBP17.04■□□□□ 0.32
ATN1-201ENST00000356654 MAP4K4O95819 1239 aaPredicted RBP17.04■□□□□ 0.32
ATN1-201ENST00000356654 WASHC4Q2M389 1173 aa17.04■□□□□ 0.32
ATN1-201ENST00000356654 ALDH1L2Q3SY69 923 aa17.04■□□□□ 0.32
ATN1-201ENST00000356654 CNTROBQ8N137 903 aa17.04■□□□□ 0.32
ATN1-201ENST00000356654 LRPPRCP42704 1394 aaKnown RBP17.04■□□□□ 0.32
ATN1-201ENST00000356654 RPAP2Q8IXW5 612 aaPredicted RBP17.04■□□□□ 0.32
ATN1-201ENST00000356654 CSPP1Q1MSJ5 1256 aa17.03■□□□□ 0.32
ATN1-201ENST00000356654 VPS37DQ86XT2 251 aa17.03■□□□□ 0.32
ATN1-201ENST00000356654 AEBP1Q8IUX7 1158 aa17.03■□□□□ 0.32
ATN1-201ENST00000356654 VPS37CA5D8V6 355 aaPredicted RBP17.03■□□□□ 0.32
ATN1-201ENST00000356654 DNAJC2Q99543 621 aaKnown RBP17.03■□□□□ 0.32
ATN1-201ENST00000356654 TEX14Q8IWB6 1497 aa17.03■□□□□ 0.32
ATN1-201ENST00000356654 MBIPQ9NS73 344 aa17.03■□□□□ 0.32
ATN1-201ENST00000356654 KRT28Q7Z3Y7 464 aa17.02■□□□□ 0.32
ATN1-201ENST00000356654 ASXL1Q8IXJ9 1541 aa17.02■□□□□ 0.32
ATN1-201ENST00000356654 ATP6V1DQ9Y5K8 247 aa17.02■□□□□ 0.31
ATN1-201ENST00000356654 SMARCA5O60264 1052 aaPredicted RBP17.01■□□□□ 0.31
ATN1-201ENST00000356654 SMC3Q9UQE7 1217 aa17.01■□□□□ 0.31
ATN1-201ENST00000356654 ZMYM3Q14202 1370 aa17.01■□□□□ 0.31
ATN1-201ENST00000356654 IGHDP01880 384 aa17.01■□□□□ 0.31
ATN1-201ENST00000356654 ARHGEF12Q9NZN5 1544 aa17■□□□□ 0.31
ATN1-201ENST00000356654 GLIPR1L2Q4G1C9 344 aa17■□□□□ 0.31
ATN1-201ENST00000356654 FOSBP53539 338 aa16.99■□□□□ 0.31
ATN1-201ENST00000356654 PIP4K2BP78356 416 aa16.99■□□□□ 0.31
ATN1-201ENST00000356654 SKOR2Q2VWA4 1001 aaPredicted RBP16.99■□□□□ 0.31
ATN1-201ENST00000356654 UHRF1BP1Q6BDS2 1440 aa16.99■□□□□ 0.31
ATN1-201ENST00000356654 MBD5Q9P267 1494 aa16.99■□□□□ 0.31
ATN1-201ENST00000356654 NUCB2P80303 420 aa16.99■□□□□ 0.31
ATN1-201ENST00000356654 CPLX1O14810 134 aa16.99■□□□□ 0.31
ATN1-201ENST00000356654 KIAA2012Q0VF49 1180 aa16.98■□□□□ 0.31
ATN1-201ENST00000356654 TRDNQ13061 729 aa16.98■□□□□ 0.31
ATN1-201ENST00000356654 CHRNA2Q15822 529 aa16.98■□□□□ 0.31
ATN1-201ENST00000356654 PLEKHH1Q9ULM0 1364 aa16.98■□□□□ 0.31
ATN1-201ENST00000356654 CCDC85AQ96PX6 553 aaPredicted RBP16.98■□□□□ 0.31
ATN1-201ENST00000356654 SPINK5Q9NQ38 1064 aaPredicted RBP16.98■□□□□ 0.31
ATN1-201ENST00000356654 TNNQ9UQP3 1299 aa16.98■□□□□ 0.31
ATN1-201ENST00000356654 PPIP5K1Q6PFW1 1433 aa16.98■□□□□ 0.31
ATN1-201ENST00000356654 KIF6Q6ZMV9 814 aa16.98■□□□□ 0.31
ATN1-201ENST00000356654 CPLX2Q6PUV4 134 aaKnown RBP16.97■□□□□ 0.31
ATN1-201ENST00000356654 PHACTR3Q96KR7 559 aa16.97■□□□□ 0.31
ATN1-201ENST00000356654 ANXA1P04083 346 aa16.97■□□□□ 0.31
ATN1-201ENST00000356654 SYNE3Q6ZMZ3 975 aa16.97■□□□□ 0.31
ATN1-201ENST00000356654 NUTM1Q86Y26 1132 aa16.97■□□□□ 0.31
ATN1-201ENST00000356654 ERC1Q8IUD2 1116 aa16.96■□□□□ 0.31
ATN1-201ENST00000356654 A0A1W2PP64 1363 aa16.96■□□□□ 0.31
ATN1-201ENST00000356654 KCNA6P17658 529 aa16.96■□□□□ 0.31
ATN1-201ENST00000356654 EIF4A2Q14240 407 aaKnown RBP16.96■□□□□ 0.31
ATN1-201ENST00000356654 AMOTQ4VCS5 1084 aa16.96■□□□□ 0.31
ATN1-201ENST00000356654 AEBP2Q6ZN18 517 aaPredicted RBP16.96■□□□□ 0.31
ATN1-201ENST00000356654 POLR3AO14802 1390 aaPredicted RBP16.96■□□□□ 0.31
ATN1-201ENST00000356654 RASSF8Q8NHQ8 419 aa16.96■□□□□ 0.3
ATN1-201ENST00000356654 PUS7Q96PZ0 661 aaKnown RBP16.96■□□□□ 0.3
ATN1-201ENST00000356654 PCDHB15Q9Y5E8 787 aa16.96■□□□□ 0.3
ATN1-201ENST00000356654 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.95■□□□□ 0.3
ATN1-201ENST00000356654 PHF14O94880 888 aa16.95■□□□□ 0.3
ATN1-201ENST00000356654 RABEP1Q15276 862 aa16.95■□□□□ 0.3
ATN1-201ENST00000356654 AACSQ86V21 672 aa16.95■□□□□ 0.3
ATN1-201ENST00000356654 ATP7AQ04656 1500 aa16.95■□□□□ 0.3
ATN1-201ENST00000356654 FLIIQ13045 1269 aa16.95■□□□□ 0.3
ATN1-201ENST00000356654 CHAF1AQ13111 956 aaPredicted RBP16.95■□□□□ 0.3
ATN1-201ENST00000356654 AKAP17AQ02040 695 aaKnown RBP16.94■□□□□ 0.3
ATN1-201ENST00000356654 C8orf58Q8NAV2 365 aa16.94■□□□□ 0.3
ATN1-201ENST00000356654 RALYLQ86SE5 291 aaKnown RBP16.93■□□□□ 0.3
ATN1-201ENST00000356654 CNNM1Q9NRU3 951 aa16.93■□□□□ 0.3
ATN1-201ENST00000356654 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.93■□□□□ 0.31e-11■■■□□ 16.8
ATN1-201ENST00000356654 LRRFIP2Q9Y608 721 aaKnown RBP16.93■□□□□ 0.3
ATN1-201ENST00000356654 COL17A1Q9UMD9 1497 aaPredicted RBP16.93■□□□□ 0.3
ATN1-201ENST00000356654 YTHDC2Q9H6S0 1430 aaKnown RBP16.93■□□□□ 0.3
ATN1-201ENST00000356654 IL16Q14005 1332 aa16.92■□□□□ 0.3
ATN1-201ENST00000356654 CCDC27Q2M243 656 aa16.92■□□□□ 0.3
ATN1-201ENST00000356654 NFXL1Q6ZNB6 911 aa16.92■□□□□ 0.3
ATN1-201ENST00000356654 ANKRD24Q8TF21 1146 aa16.92■□□□□ 0.3
ATN1-201ENST00000356654 CFAP65Q6ZU64 1925 aaKnown RBP16.92■□□□□ 0.3
ATN1-201ENST00000356654 KRT24Q2M2I5 525 aa16.92■□□□□ 0.3
ATN1-201ENST00000356654 CREBRFQ8IUR6 639 aa16.92■□□□□ 0.3
ATN1-201ENST00000356654 KDM6BO15054 1643 aa16.92■□□□□ 0.3
ATN1-201ENST00000356654 TSPYL6Q8N831 410 aa16.91■□□□□ 0.3
ATN1-201ENST00000356654 CHMP4CQ96CF2 233 aa16.91■□□□□ 0.3
ATN1-201ENST00000356654 ADAMTS2O95450 1211 aa16.91■□□□□ 0.3
ATN1-201ENST00000356654 CWC27Q6UX04 472 aaKnown RBP16.91■□□□□ 0.3
ATN1-201ENST00000356654 DNAAF4Q8WXU2 420 aa16.91■□□□□ 0.3
ATN1-201ENST00000356654 RLBP1P12271 317 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms