RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 CDC45O75419 566 aa9.34□□□□□ -0.91
CCR9-201ENST00000355983 CTR9Q6PD62 1173 aa9.34□□□□□ -0.91
CCR9-201ENST00000355983 TBC1D9Q6ZT07 1266 aa9.34□□□□□ -0.91
CCR9-201ENST00000355983 KIF18AQ8NI77 898 aa9.34□□□□□ -0.91
CCR9-201ENST00000355983 RBM27Q9P2N5 1060 aaKnown RBP9.34□□□□□ -0.91
CCR9-201ENST00000355983 NOS1P29475 1434 aa9.34□□□□□ -0.91
CCR9-201ENST00000355983 SPHKAPQ2M3C7 1700 aa9.34□□□□□ -0.91
CCR9-201ENST00000355983 CFAP65Q6ZU64 1925 aaKnown RBP9.34□□□□□ -0.91
CCR9-201ENST00000355983 MAST1Q9Y2H9 1570 aa9.34□□□□□ -0.91
CCR9-201ENST00000355983 SLFNL1Q499Z3 407 aa9.34□□□□□ -0.91
CCR9-201ENST00000355983 PLCD3Q8N3E9 789 aa9.34□□□□□ -0.91
CCR9-201ENST00000355983 JARID2Q92833 1246 aaPredicted RBP9.34□□□□□ -0.91
CCR9-201ENST00000355983 ZFP91Q96JP5 570 aaPredicted RBP9.34□□□□□ -0.91
CCR9-201ENST00000355983 ZDHHC9Q9Y397 364 aa9.34□□□□□ -0.91
CCR9-201ENST00000355983 CAPN2P17655 700 aa9.33□□□□□ -0.92
CCR9-201ENST00000355983 TNNQ9UQP3 1299 aa9.33□□□□□ -0.92
CCR9-201ENST00000355983 PAXBP1Q9Y5B6 917 aa9.33□□□□□ -0.92
CCR9-201ENST00000355983 ABCC11Q96J66 1382 aa9.33□□□□□ -0.92
CCR9-201ENST00000355983 ZBTB22O15209 634 aa9.33□□□□□ -0.92
CCR9-201ENST00000355983 GOLGA6L6A8MZA4 724 aa9.32□□□□□ -0.92
CCR9-201ENST00000355983 ST18O60284 1047 aa9.32□□□□□ -0.92
CCR9-201ENST00000355983 TMEM87AQ8NBN3 555 aa9.32□□□□□ -0.92
CCR9-201ENST00000355983 ADAMTS12P58397 1594 aa9.32□□□□□ -0.92
CCR9-201ENST00000355983 NEURL4Q96JN8 1562 aa9.32□□□□□ -0.92
CCR9-201ENST00000355983 BRPF1P55201 1214 aaPredicted RBP9.32□□□□□ -0.92
CCR9-201ENST00000355983 ATF7IPQ6VMQ6 1270 aa9.32□□□□□ -0.92
CCR9-201ENST00000355983 FOXD4L1Q9NU39 408 aa9.32□□□□□ -0.92
CCR9-201ENST00000355983 IFT140Q96RY7 1462 aa9.32□□□□□ -0.92
CCR9-201ENST00000355983 ADCY5O95622 1261 aa9.31□□□□□ -0.92
CCR9-201ENST00000355983 BRD1O95696 1058 aa9.31□□□□□ -0.92
CCR9-201ENST00000355983 AXDND1Q5T1B0 1012 aaPredicted RBP9.31□□□□□ -0.92
CCR9-201ENST00000355983 ZNF397Q8NF99 534 aaPredicted RBP9.31□□□□□ -0.92
CCR9-201ENST00000355983 IL16Q14005 1332 aa9.31□□□□□ -0.92
CCR9-201ENST00000355983 KDM4AO75164 1064 aa9.31□□□□□ -0.92
CCR9-201ENST00000355983 MCM2P49736 904 aa9.31□□□□□ -0.92
CCR9-201ENST00000355983 RBM42Q9BTD8 480 aaKnown RBP9.31□□□□□ -0.92
CCR9-201ENST00000355983 PDS5BQ9NTI5 1447 aa9.31□□□□□ -0.92
CCR9-201ENST00000355983 MYO3AQ8NEV4 1616 aa9.3□□□□□ -0.92
CCR9-201ENST00000355983 REC8O95072 547 aa9.3□□□□□ -0.92
CCR9-201ENST00000355983 TRIM27P14373 513 aa9.3□□□□□ -0.92
CCR9-201ENST00000355983 CYP2C19P33261 490 aa9.3□□□□□ -0.92
CCR9-201ENST00000355983 MUM1L1Q5H9M0 696 aa9.3□□□□□ -0.92
CCR9-201ENST00000355983 RNF20Q5VTR2 975 aa9.3□□□□□ -0.92
CCR9-201ENST00000355983 FEZ2Q9UHY8 353 aaPredicted RBP9.3□□□□□ -0.92
CCR9-201ENST00000355983 TAOK2Q9UL54 1235 aa9.3□□□□□ -0.92
CCR9-201ENST00000355983 PIK3R4Q99570 1358 aa9.3□□□□□ -0.92
CCR9-201ENST00000355983 IPO8O15397 1037 aaKnown RBP9.3□□□□□ -0.92
CCR9-201ENST00000355983 INTS4Q96HW7 963 aaKnown RBP9.3□□□□□ -0.92
CCR9-201ENST00000355983 TTC12Q9H892 705 aaPredicted RBP9.3□□□□□ -0.92
CCR9-201ENST00000355983 DISP1Q96F81 1524 aa9.3□□□□□ -0.92
CCR9-201ENST00000355983 CLGNO14967 610 aa9.29□□□□□ -0.92
CCR9-201ENST00000355983 CCDC183Q5T5S1 534 aa9.29□□□□□ -0.92
CCR9-201ENST00000355983 TCP11L2Q8N4U5 519 aa9.29□□□□□ -0.92
CCR9-201ENST00000355983 USP26Q9BXU7 913 aa9.29□□□□□ -0.92
CCR9-201ENST00000355983 CHMP4AQ9BY43 222 aa9.29□□□□□ -0.92
CCR9-201ENST00000355983 RNF216Q9NWF9 866 aaPredicted RBP9.29□□□□□ -0.92
CCR9-201ENST00000355983 ERCC6Q03468 1493 aa9.29□□□□□ -0.92
CCR9-201ENST00000355983 ZNF518AQ6AHZ1 1483 aa9.29□□□□□ -0.92
CCR9-201ENST00000355983 RNF214Q8ND24 703 aa9.29□□□□□ -0.92
CCR9-201ENST00000355983 ZNF428Q96B54 188 aa9.29□□□□□ -0.92
CCR9-201ENST00000355983 KIF1BPQ96EK5 621 aa9.29□□□□□ -0.92
CCR9-201ENST00000355983 NSFL1CQ9UNZ2 370 aaKnown RBP9.29□□□□□ -0.92
CCR9-201ENST00000355983 TARBP1Q13395 1621 aaKnown RBP9.29□□□□□ -0.92
CCR9-201ENST00000355983 IGSF3O75054 1194 aa9.28□□□□□ -0.92
CCR9-201ENST00000355983 CUL4AQ13619 759 aa9.28□□□□□ -0.92
CCR9-201ENST00000355983 SECISBP2LQ93073 1101 aaKnown RBP9.28□□□□□ -0.92
CCR9-201ENST00000355983 PRG4Q92954 1404 aaPredicted RBP9.28□□□□□ -0.92
CCR9-201ENST00000355983 URB2Q14146 1524 aaKnown RBP9.28□□□□□ -0.92
CCR9-201ENST00000355983 PKP1Q13835 747 aa9.28□□□□□ -0.92
CCR9-201ENST00000355983 ALDH1L2Q3SY69 923 aa9.28□□□□□ -0.92
CCR9-201ENST00000355983 ABCA6Q8N139 1617 aa9.28□□□□□ -0.92
CCR9-201ENST00000355983 SBNO2Q9Y2G9 1366 aa9.28□□□□□ -0.92
CCR9-201ENST00000355983 TRIM6-TRIM34B2RNG4 842 aa9.28□□□□□ -0.92
CCR9-201ENST00000355983 ITPRIPQ8IWB1 547 aa9.28□□□□□ -0.92
CCR9-201ENST00000355983 IL17RAQ96F46 866 aa9.28□□□□□ -0.92
CCR9-201ENST00000355983 TRIM34Q9BYJ4 488 aa9.28□□□□□ -0.92
CCR9-201ENST00000355983 LNPKQ9C0E8 428 aa9.28□□□□□ -0.92
CCR9-201ENST00000355983 KCNF1Q9H3M0 494 aa9.28□□□□□ -0.92
CCR9-201ENST00000355983 BRMS1Q9HCU9 246 aa9.27□□□□□ -0.93
CCR9-201ENST00000355983 MX1P20591 662 aa9.27□□□□□ -0.93
CCR9-201ENST00000355983 SMC4Q9NTJ3 1288 aa9.27□□□□□ -0.93
CCR9-201ENST00000355983 KIF24Q5T7B8 1368 aa9.26□□□□□ -0.93
CCR9-201ENST00000355983 PPIP5K1Q6PFW1 1433 aa9.26□□□□□ -0.93
CCR9-201ENST00000355983 FAM177BA6PVY3 158 aa9.26□□□□□ -0.93
CCR9-201ENST00000355983 TSPY4P0CV99 314 aa9.26□□□□□ -0.93
CCR9-201ENST00000355983 TSPY10P0CW01 314 aa9.26□□□□□ -0.93
CCR9-201ENST00000355983 PSEN1P49768 467 aa9.26□□□□□ -0.93
CCR9-201ENST00000355983 INTS3Q68E01 1043 aaKnown RBP9.26□□□□□ -0.93
CCR9-201ENST00000355983 DHX37Q8IY37 1157 aaKnown RBP9.26□□□□□ -0.93
CCR9-201ENST00000355983 FUCA2Q9BTY2 467 aa9.26□□□□□ -0.93
CCR9-201ENST00000355983 PYCARDQ9ULZ3 195 aa9.26□□□□□ -0.93
CCR9-201ENST00000355983 ERVK-7P63135 1459 aa9.26□□□□□ -0.93
CCR9-201ENST00000355983 INO80Q9ULG1 1556 aaPredicted RBP9.26□□□□□ -0.93
CCR9-201ENST00000355983 HOMEZQ8IX15 550 aa9.26□□□□□ -0.93
CCR9-201ENST00000355983 NOP2P46087 812 aaKnown RBP9.25□□□□□ -0.93
CCR9-201ENST00000355983 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.25□□□□□ -0.93
CCR9-201ENST00000355983 TMEM57Q8N5G2 664 aa9.25□□□□□ -0.93
CCR9-201ENST00000355983 CCDC112Q8NEF3 446 aa9.25□□□□□ -0.93
CCR9-201ENST00000355983 ARHGAP45Q92619 1136 aa9.25□□□□□ -0.93
CCR9-201ENST00000355983 ZNF622Q969S3 477 aaKnown RBP eCLIP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms