RNA–Protein interactions for RNA: ENST00000355637.8

RBFOX1-203, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-203ENST00000355637 CARMIL2Q6F5E8 1435 aa10.78□□□□□ -0.68
RBFOX1-203ENST00000355637 NAA30Q147X3 362 aaPredicted RBP10.78□□□□□ -0.68
RBFOX1-203ENST00000355637 ANKRD20A12PQ8NF67 263 aa10.78□□□□□ -0.68
RBFOX1-203ENST00000355637 PZPP20742 1482 aa10.78□□□□□ -0.68
RBFOX1-203ENST00000355637 RAPGEF6Q8TEU7 1601 aa10.78□□□□□ -0.68
RBFOX1-203ENST00000355637 SPATA31E1Q6ZUB1 1445 aa10.78□□□□□ -0.68
RBFOX1-203ENST00000355637 HSP90AB1P08238 724 aaKnown RBP10.78□□□□□ -0.68
RBFOX1-203ENST00000355637 TTC31Q49AM3 519 aaPredicted RBP10.78□□□□□ -0.68
RBFOX1-203ENST00000355637 NBPF10Q6P3W6 841 aaKnown RBP10.78□□□□□ -0.68
RBFOX1-203ENST00000355637 CASC1Q6TDU7 716 aa10.78□□□□□ -0.68
RBFOX1-203ENST00000355637 BORCS6Q96GS4 357 aa10.78□□□□□ -0.68
RBFOX1-203ENST00000355637 LCMT1Q9UIC8 334 aa10.78□□□□□ -0.68
RBFOX1-203ENST00000355637 GPATCH8Q9UKJ3 1502 aaKnown RBP10.77□□□□□ -0.69
RBFOX1-203ENST00000355637 PPP1R12AO14974 1030 aaPredicted RBP10.77□□□□□ -0.69
RBFOX1-203ENST00000355637 CAND2O75155 1236 aa10.77□□□□□ -0.69
RBFOX1-203ENST00000355637 CCDC189A1A4V9 331 aa10.76□□□□□ -0.69
RBFOX1-203ENST00000355637 NPHP1O15259 732 aa10.76□□□□□ -0.69
RBFOX1-203ENST00000355637 ANKRD7Q92527 254 aa10.76□□□□□ -0.69
RBFOX1-203ENST00000355637 MED4Q9NPJ6 270 aa10.76□□□□□ -0.69
RBFOX1-203ENST00000355637 POLKQ9UBT6 870 aa10.76□□□□□ -0.69
RBFOX1-203ENST00000355637 PDLIM2Q96JY6 352 aa10.76□□□□□ -0.69
RBFOX1-203ENST00000355637 SLC24A3Q9HC58 644 aa10.76□□□□□ -0.69
RBFOX1-203ENST00000355637 A0A1B0GUL7 405 aa10.76□□□□□ -0.69
RBFOX1-203ENST00000355637 POLR3GO15318 223 aaPredicted RBP10.76□□□□□ -0.69
RBFOX1-203ENST00000355637 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.76□□□□□ -0.69
RBFOX1-203ENST00000355637 ZNF692Q9BU19 519 aaPredicted RBP10.76□□□□□ -0.69
RBFOX1-203ENST00000355637 CCT2P78371 535 aaKnown RBP10.75□□□□□ -0.69
RBFOX1-203ENST00000355637 PAIP2Q9BPZ3 127 aaKnown RBP10.75□□□□□ -0.69
RBFOX1-203ENST00000355637 DHX29Q7Z478 1369 aaKnown RBP10.75□□□□□ -0.69
RBFOX1-203ENST00000355637 KDM2BQ8NHM5 1336 aa10.74□□□□□ -0.69
RBFOX1-203ENST00000355637 FOXD4L6Q3SYB3 417 aaPredicted RBP10.74□□□□□ -0.69
RBFOX1-203ENST00000355637 NOM1Q5C9Z4 860 aaKnown RBP10.74□□□□□ -0.69
RBFOX1-203ENST00000355637 FOXD4L3Q6VB84 417 aaPredicted RBP10.74□□□□□ -0.69
RBFOX1-203ENST00000355637 KIF18AQ8NI77 898 aa10.74□□□□□ -0.69
RBFOX1-203ENST00000355637 GTF3C6Q969F1 213 aa10.74□□□□□ -0.69
RBFOX1-203ENST00000355637 ROCK2O75116 1388 aaKnown RBP10.74□□□□□ -0.69
RBFOX1-203ENST00000355637 ATP2B1P20020 1258 aa10.74□□□□□ -0.69
RBFOX1-203ENST00000355637 NCBP1Q09161 790 aaKnown RBP10.74□□□□□ -0.69
RBFOX1-203ENST00000355637 PIBF1Q8WXW3 757 aa10.74□□□□□ -0.69
RBFOX1-203ENST00000355637 BIN2Q9UBW5 565 aaPredicted RBP10.74□□□□□ -0.69
RBFOX1-203ENST00000355637 MORC2Q9Y6X9 1032 aaPredicted RBP10.74□□□□□ -0.69
RBFOX1-203ENST00000355637 CYP2C19P33261 490 aa10.74□□□□□ -0.69
RBFOX1-203ENST00000355637 ZSCAN23Q3MJ62 389 aa10.74□□□□□ -0.69
RBFOX1-203ENST00000355637 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.74□□□□□ -0.69
RBFOX1-203ENST00000355637 V9GYY5 206 aaPredicted RBP10.74□□□□□ -0.69
RBFOX1-203ENST00000355637 ZKSCAN8Q15776 578 aaPredicted RBP10.73□□□□□ -0.69
RBFOX1-203ENST00000355637 MCTP1Q6DN14 999 aa10.73□□□□□ -0.69
RBFOX1-203ENST00000355637 CCDC97Q96F63 343 aaPredicted RBP10.73□□□□□ -0.69
RBFOX1-203ENST00000355637 C9orf84Q5VXU9 1444 aa10.73□□□□□ -0.69
RBFOX1-203ENST00000355637 NPM1P06748 294 aaKnown RBP eCLIP10.73□□□□□ -0.69
RBFOX1-203ENST00000355637 TPM3P06753 285 aa10.73□□□□□ -0.69
RBFOX1-203ENST00000355637 FAM184AQ8NB25 1140 aa10.73□□□□□ -0.69
RBFOX1-203ENST00000355637 RTF1Q92541 710 aaKnown RBP10.73□□□□□ -0.69
RBFOX1-203ENST00000355637 TBC1D32Q96NH3 1257 aa10.73□□□□□ -0.69
RBFOX1-203ENST00000355637 RBM27Q9P2N5 1060 aaKnown RBP10.73□□□□□ -0.69
RBFOX1-203ENST00000355637 KIF15Q9NS87 1388 aa10.73□□□□□ -0.69
RBFOX1-203ENST00000355637 NEBLO76041 1014 aa10.73□□□□□ -0.69
RBFOX1-203ENST00000355637 LRRFIP2Q9Y608 721 aaKnown RBP10.72□□□□□ -0.69
RBFOX1-203ENST00000355637 TEX35Q5T0J7 233 aa10.72□□□□□ -0.69
RBFOX1-203ENST00000355637 CWC15Q9P013 229 aaKnown RBP10.72□□□□□ -0.69
RBFOX1-203ENST00000355637 KIF14Q15058 1648 aa10.72□□□□□ -0.69
RBFOX1-203ENST00000355637 SYCE3A1L190 88 aa10.71□□□□□ -0.69
RBFOX1-203ENST00000355637 KLHL40Q2TBA0 621 aa10.71□□□□□ -0.69
RBFOX1-203ENST00000355637 MFSD4BQ5TF39 518 aa10.71□□□□□ -0.69
RBFOX1-203ENST00000355637 NAIF1Q69YI7 327 aaPredicted RBP10.71□□□□□ -0.69
RBFOX1-203ENST00000355637 DNAJC14Q6Y2X3 702 aaPredicted RBP10.71□□□□□ -0.69
RBFOX1-203ENST00000355637 TMTC2Q8N394 836 aa10.71□□□□□ -0.69
RBFOX1-203ENST00000355637 NUCKS1Q9H1E3 243 aaKnown RBP10.71□□□□□ -0.69
RBFOX1-203ENST00000355637 ZNF446Q9NWS9 450 aa10.71□□□□□ -0.69
RBFOX1-203ENST00000355637 U2SURPO15042 1029 aaKnown RBP10.71□□□□□ -0.69
RBFOX1-203ENST00000355637 SCP2P22307 547 aa10.71□□□□□ -0.69
RBFOX1-203ENST00000355637 SSFA2P28290 1259 aa10.71□□□□□ -0.7
RBFOX1-203ENST00000355637 ARMC3Q5W041 872 aa10.7□□□□□ -0.7
RBFOX1-203ENST00000355637 MORC1Q86VD1 984 aa10.7□□□□□ -0.7
RBFOX1-203ENST00000355637 PACS2Q86VP3 889 aa10.7□□□□□ -0.7
RBFOX1-203ENST00000355637 ITFG2Q969R8 447 aa10.7□□□□□ -0.7
RBFOX1-203ENST00000355637 MYBBP1AQ9BQG0 1328 aaKnown RBP10.7□□□□□ -0.7
RBFOX1-203ENST00000355637 EIF4G3O43432 1585 aaKnown RBP10.7□□□□□ -0.7
RBFOX1-203ENST00000355637 MAFGO15525 162 aa10.7□□□□□ -0.7
RBFOX1-203ENST00000355637 LIG1P18858 919 aa10.7□□□□□ -0.7
RBFOX1-203ENST00000355637 ZSCAN26Q16670 478 aa10.7□□□□□ -0.7
RBFOX1-203ENST00000355637 ZC3H12AQ5D1E8 599 aaKnown RBP10.7□□□□□ -0.7
RBFOX1-203ENST00000355637 C22orf23Q9BZE7 217 aa10.7□□□□□ -0.7
RBFOX1-203ENST00000355637 MNAT1P51948 309 aa10.69□□□□□ -0.7
RBFOX1-203ENST00000355637 FKBP5Q13451 457 aaPredicted RBP10.69□□□□□ -0.7
RBFOX1-203ENST00000355637 SF3A1Q15459 793 aaKnown RBP10.69□□□□□ -0.7
RBFOX1-203ENST00000355637 RRP15Q9Y3B9 282 aaKnown RBP10.69□□□□□ -0.7
RBFOX1-203ENST00000355637 IPO7O95373 1038 aaKnown RBP10.69□□□□□ -0.7
RBFOX1-203ENST00000355637 SYNJ2O15056 1496 aa10.69□□□□□ -0.7
RBFOX1-203ENST00000355637 ANKRD65E5RJM6 399 aa10.68□□□□□ -0.7
RBFOX1-203ENST00000355637 KDM4AO75164 1064 aa10.68□□□□□ -0.7
RBFOX1-203ENST00000355637 REC8O95072 547 aa10.68□□□□□ -0.7
RBFOX1-203ENST00000355637 CPSF2Q9P2I0 782 aaKnown RBP10.68□□□□□ -0.7
RBFOX1-203ENST00000355637 CCDC27Q2M243 656 aa10.68□□□□□ -0.7
RBFOX1-203ENST00000355637 TXLNBQ8N3L3 684 aa10.68□□□□□ -0.7
RBFOX1-203ENST00000355637 JMYQ8N9B5 988 aa10.68□□□□□ -0.7
RBFOX1-203ENST00000355637 ITSN2Q9NZM3 1697 aa10.68□□□□□ -0.7
RBFOX1-203ENST00000355637 MAGI1Q96QZ7 1491 aaPredicted RBP10.68□□□□□ -0.7
RBFOX1-203ENST00000355637 ECM2O94769 699 aaPredicted RBP10.68□□□□□ -0.7
RBFOX1-203ENST00000355637 BMS1Q14692 1282 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms