RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 HOXC9P31274 260 aa17.96■□□□□ 0.47
HOXA1-202ENST00000355633 RSPH6AQ9H0K4 717 aa17.96■□□□□ 0.47
HOXA1-202ENST00000355633 PLEKHG5O94827 1062 aa17.96■□□□□ 0.47
HOXA1-202ENST00000355633 HMOX1P09601 288 aa17.96■□□□□ 0.47
HOXA1-202ENST00000355633 SOS2Q07890 1332 aaPredicted RBP17.95■□□□□ 0.46
HOXA1-202ENST00000355633 MED1Q15648 1581 aaPredicted RBP17.95■□□□□ 0.46
HOXA1-202ENST00000355633 NHSL1Q5SYE7 1610 aa17.95■□□□□ 0.46
HOXA1-202ENST00000355633 PHRF1Q9P1Y6 1649 aaKnown RBP17.95■□□□□ 0.46
HOXA1-202ENST00000355633 ARHGEF10O15013 1369 aa17.95■□□□□ 0.46
HOXA1-202ENST00000355633 RGPD1P0DJD0 1748 aa17.95■□□□□ 0.46
HOXA1-202ENST00000355633 PRKAR2BP31323 418 aa17.94■□□□□ 0.46
HOXA1-202ENST00000355633 RRP7AQ9Y3A4 280 aaKnown RBP17.94■□□□□ 0.46
HOXA1-202ENST00000355633 NEFMP07197 916 aa17.94■□□□□ 0.46
HOXA1-202ENST00000355633 NEUROD2Q15784 382 aa17.94■□□□□ 0.46
HOXA1-202ENST00000355633 NCBP3Q53F19 620 aaKnown RBP17.93■□□□□ 0.46
HOXA1-202ENST00000355633 IP6K1Q92551 441 aa17.93■□□□□ 0.46
HOXA1-202ENST00000355633 CDCA7LQ96GN5 454 aa17.93■□□□□ 0.46
HOXA1-202ENST00000355633 GTF3C3Q9Y5Q9 886 aa17.93■□□□□ 0.46
HOXA1-202ENST00000355633 GOLGA2Q08379 1002 aa17.93■□□□□ 0.46
HOXA1-202ENST00000355633 ZBTB7CA1YPR0 619 aa17.92■□□□□ 0.46
HOXA1-202ENST00000355633 ARHGEF25Q86VW2 580 aa17.92■□□□□ 0.46
HOXA1-202ENST00000355633 CCDC27Q2M243 656 aa17.91■□□□□ 0.46
HOXA1-202ENST00000355633 WWC1Q8IX03 1113 aa17.91■□□□□ 0.46
HOXA1-202ENST00000355633 TMPOP42166 694 aaKnown RBP17.91■□□□□ 0.46
HOXA1-202ENST00000355633 SULT6B1Q6IMI4 303 aa17.91■□□□□ 0.46
HOXA1-202ENST00000355633 ROBO1Q9Y6N7 1651 aa17.91■□□□□ 0.46
HOXA1-202ENST00000355633 CRYBG1Q9Y4K1 1723 aa17.9■□□□□ 0.46
HOXA1-202ENST00000355633 PHF23Q9BUL5 403 aaPredicted RBP17.89■□□□□ 0.46
HOXA1-202ENST00000355633 AEBP1Q8IUX7 1158 aa17.89■□□□□ 0.45
HOXA1-202ENST00000355633 IGSF1Q8N6C5 1336 aa17.89■□□□□ 0.45
HOXA1-202ENST00000355633 LTV1Q96GA3 475 aaPredicted RBP17.88■□□□□ 0.45
HOXA1-202ENST00000355633 EYA1Q99502 592 aa17.88■□□□□ 0.45
HOXA1-202ENST00000355633 CABLES1Q8TDN4 633 aa17.88■□□□□ 0.45
HOXA1-202ENST00000355633 PHACTR3Q96KR7 559 aa17.88■□□□□ 0.45
HOXA1-202ENST00000355633 SUPT16HQ9Y5B9 1047 aaKnown RBP17.88■□□□□ 0.45
HOXA1-202ENST00000355633 ZC3H6P61129 1189 aaKnown RBP17.87■□□□□ 0.45
HOXA1-202ENST00000355633 SLFN5Q08AF3 891 aa17.87■□□□□ 0.45
HOXA1-202ENST00000355633 RIPK4P57078 832 aa17.86■□□□□ 0.45
HOXA1-202ENST00000355633 KDRP35968 1356 aa17.86■□□□□ 0.45
HOXA1-202ENST00000355633 E9PSI1 815 aa17.86■□□□□ 0.45
HOXA1-202ENST00000355633 NFE2L2Q16236 605 aa17.86■□□□□ 0.45
HOXA1-202ENST00000355633 WDR63Q8IWG1 891 aa17.86■□□□□ 0.45
HOXA1-202ENST00000355633 AHDC1Q5TGY3 1603 aaPredicted RBP17.85■□□□□ 0.45
HOXA1-202ENST00000355633 DUSP27Q5VZP5 1158 aa17.85■□□□□ 0.45
HOXA1-202ENST00000355633 TRIM35Q9UPQ4 493 aa17.84■□□□□ 0.45
HOXA1-202ENST00000355633 SPINK5Q9NQ38 1064 aaPredicted RBP17.84■□□□□ 0.45
HOXA1-202ENST00000355633 TOM1O60784 492 aa17.83■□□□□ 0.45
HOXA1-202ENST00000355633 TRMT2AQ8IZ69 625 aaKnown RBP17.83■□□□□ 0.45
HOXA1-202ENST00000355633 RGPD5Q99666 1765 aa17.83■□□□□ 0.44
HOXA1-202ENST00000355633 CPDO75976 1380 aa17.82■□□□□ 0.44
HOXA1-202ENST00000355633 ABCA3Q99758 1704 aa17.82■□□□□ 0.44
HOXA1-202ENST00000355633 DLG5Q8TDM6 1919 aa17.82■□□□□ 0.44
HOXA1-202ENST00000355633 ABCC6O95255 1503 aa17.82■□□□□ 0.44
HOXA1-202ENST00000355633 AXIN2Q9Y2T1 843 aa17.82■□□□□ 0.44
HOXA1-202ENST00000355633 COL18A1P39060 1754 aa17.81■□□□□ 0.44
HOXA1-202ENST00000355633 NEFLP07196 543 aa17.81■□□□□ 0.44
HOXA1-202ENST00000355633 HAP1P54257 671 aaPredicted RBP17.81■□□□□ 0.44
HOXA1-202ENST00000355633 ANKRD24Q8TF21 1146 aa17.81■□□□□ 0.44
HOXA1-202ENST00000355633 LRRC59Q96AG4 307 aaKnown RBP17.81■□□□□ 0.44
HOXA1-202ENST00000355633 RGPD2P0DJD1 1756 aa17.81■□□□□ 0.44
HOXA1-202ENST00000355633 KIAA0232Q92628 1395 aa17.81■□□□□ 0.44
HOXA1-202ENST00000355633 LMOD3Q0VAK6 560 aa17.79■□□□□ 0.44
HOXA1-202ENST00000355633 NBPF6Q5VWK0 638 aa17.79■□□□□ 0.44
HOXA1-202ENST00000355633 NBPF4Q96M43 638 aa17.79■□□□□ 0.44
HOXA1-202ENST00000355633 RCAN3Q9UKA8 241 aa17.79■□□□□ 0.44
HOXA1-202ENST00000355633 CHRNA2Q15822 529 aa17.79■□□□□ 0.44
HOXA1-202ENST00000355633 USHBP1Q8N6Y0 703 aa17.79■□□□□ 0.44
HOXA1-202ENST00000355633 ERBB3P21860 1342 aa17.78■□□□□ 0.44
HOXA1-202ENST00000355633 PHLPP1O60346 1717 aa17.78■□□□□ 0.44
HOXA1-202ENST00000355633 IL16Q14005 1332 aa17.78■□□□□ 0.44
HOXA1-202ENST00000355633 CAMTA1Q9Y6Y1 1673 aa17.78■□□□□ 0.44
HOXA1-202ENST00000355633 MYH16Q9H6N6 1097 aa17.77■□□□□ 0.44
HOXA1-202ENST00000355633 PIP4K2BP78356 416 aa17.77■□□□□ 0.43
HOXA1-202ENST00000355633 NCAPD2Q15021 1401 aa17.76■□□□□ 0.43
HOXA1-202ENST00000355633 UBAP1LF5GYI3 381 aa17.76■□□□□ 0.43
HOXA1-202ENST00000355633 PRDM11Q9NQV5 511 aa17.76■□□□□ 0.43
HOXA1-202ENST00000355633 FKBP8Q14318 412 aa17.76■□□□□ 0.43
HOXA1-202ENST00000355633 MTHFSDQ2M296 383 aaKnown RBP17.76■□□□□ 0.43
HOXA1-202ENST00000355633 GAS2L2Q8NHY3 880 aa17.76■□□□□ 0.43
HOXA1-202ENST00000355633 CALD1Q05682 793 aaKnown RBP17.75■□□□□ 0.43
HOXA1-202ENST00000355633 FAM208AQ9UK61 1670 aaKnown RBP17.75■□□□□ 0.43
HOXA1-202ENST00000355633 RNF123Q5XPI4 1314 aa17.75■□□□□ 0.43
HOXA1-202ENST00000355633 COL16A1Q07092 1604 aaPredicted RBP17.75■□□□□ 0.43
HOXA1-202ENST00000355633 COL22A1Q8NFW1 1626 aaPredicted RBP17.75■□□□□ 0.43
HOXA1-202ENST00000355633 LMO7Q8WWI1 1683 aa17.74■□□□□ 0.43
HOXA1-202ENST00000355633 THUMPD2Q9BTF0 503 aaKnown RBP17.73■□□□□ 0.43
HOXA1-202ENST00000355633 FAM83GA6ND36 823 aa17.72■□□□□ 0.43
HOXA1-202ENST00000355633 CSB-PGBD3P0DP91 1061 aa17.72■□□□□ 0.43
HOXA1-202ENST00000355633 FANCIQ9NVI1 1328 aa17.72■□□□□ 0.43
HOXA1-202ENST00000355633 CERKQ8TCT0 537 aa17.71■□□□□ 0.43
HOXA1-202ENST00000355633 NLRP2Q9NX02 1062 aa17.71■□□□□ 0.43
HOXA1-202ENST00000355633 DCTN1Q14203 1278 aa17.71■□□□□ 0.42
HOXA1-202ENST00000355633 TSR2Q969E8 191 aaKnown RBP17.71■□□□□ 0.42
HOXA1-202ENST00000355633 IRX6P78412 446 aaPredicted RBP17.7■□□□□ 0.42
HOXA1-202ENST00000355633 RTF1Q92541 710 aaKnown RBP17.7■□□□□ 0.42
HOXA1-202ENST00000355633 RRP1P56182 461 aaKnown RBP17.69■□□□□ 0.42
HOXA1-202ENST00000355633 IFT57Q9NWB7 429 aa17.69■□□□□ 0.42
HOXA1-202ENST00000355633 LAS1LQ9Y4W2 734 aaKnown RBP17.69■□□□□ 0.42
HOXA1-202ENST00000355633 GNAI1P63096 354 aa17.69■□□□□ 0.42
HOXA1-202ENST00000355633 MCM10Q7L590 875 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms