RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 DIP2CQ9Y2E4 1556 aa17.31■□□□□ 0.36
EBF3-201ENST00000355311 F6X3S4 739 aa17.31■□□□□ 0.36
EBF3-201ENST00000355311 IL13P35225 146 aa17.31■□□□□ 0.36
EBF3-201ENST00000355311 SIRT2Q8IXJ6 389 aa17.3■□□□□ 0.36
EBF3-201ENST00000355311 TSHZ3Q63HK5 1081 aa17.3■□□□□ 0.36
EBF3-201ENST00000355311 CHD1LQ86WJ1 897 aa17.3■□□□□ 0.36
EBF3-201ENST00000355311 ARHGEF28Q8N1W1 1705 aaKnown RBP17.29■□□□□ 0.36
EBF3-201ENST00000355311 PRR36Q9H6K5 1346 aa17.29■□□□□ 0.36
EBF3-201ENST00000355311 SETBP1Q9Y6X0 1596 aa17.29■□□□□ 0.36
EBF3-201ENST00000355311 PPIP5K1Q6PFW1 1433 aa17.29■□□□□ 0.36
EBF3-201ENST00000355311 CCDC61Q9Y6R9 512 aa17.29■□□□□ 0.36
EBF3-201ENST00000355311 ZBTB7BO15156 539 aaPredicted RBP17.28■□□□□ 0.36
EBF3-201ENST00000355311 CD2BP2O95400 341 aaKnown RBP17.28■□□□□ 0.36
EBF3-201ENST00000355311 MRPL50Q8N5N7 158 aaKnown RBP17.28■□□□□ 0.36
EBF3-201ENST00000355311 HSP90AA1P07900 732 aaKnown RBP17.28■□□□□ 0.36
EBF3-201ENST00000355311 LTKP29376 864 aa17.27■□□□□ 0.36
EBF3-201ENST00000355311 RIMS2Q9UQ26 1411 aa17.27■□□□□ 0.36
EBF3-201ENST00000355311 EIF4A2Q14240 407 aaKnown RBP17.26■□□□□ 0.35
EBF3-201ENST00000355311 XRCC6P12956 609 aaKnown RBP eCLIP17.26■□□□□ 0.35
EBF3-201ENST00000355311 TPRNQ4KMQ1 711 aa17.26■□□□□ 0.35
EBF3-201ENST00000355311 HSP90AA2PQ14568 343 aaPredicted RBP17.25■□□□□ 0.35
EBF3-201ENST00000355311 NSD2O96028 1365 aa17.25■□□□□ 0.35
EBF3-201ENST00000355311 KIF16BQ96L93 1317 aa17.25■□□□□ 0.35
EBF3-201ENST00000355311 USHBP1Q8N6Y0 703 aa17.25■□□□□ 0.35
EBF3-201ENST00000355311 PNNQ9H307 717 aaKnown RBP17.25■□□□□ 0.35
EBF3-201ENST00000355311 ACEP12821 1306 aa17.25■□□□□ 0.35
EBF3-201ENST00000355311 SMC5Q8IY18 1101 aa17.25■□□□□ 0.35
EBF3-201ENST00000355311 MYO3AQ8NEV4 1616 aa17.24■□□□□ 0.35
EBF3-201ENST00000355311 NUCB1Q02818 461 aa17.24■□□□□ 0.35
EBF3-201ENST00000355311 HDAC1Q13547 482 aaPredicted RBP17.24■□□□□ 0.35
EBF3-201ENST00000355311 ANTXR1Q9H6X2 564 aa17.24■□□□□ 0.35
EBF3-201ENST00000355311 ALKQ9UM73 1620 aa17.23■□□□□ 0.35
EBF3-201ENST00000355311 GNAI1P63096 354 aa17.23■□□□□ 0.35
EBF3-201ENST00000355311 FOXD4L5Q5VV16 416 aaPredicted RBP17.23■□□□□ 0.35
EBF3-201ENST00000355311 G2E3Q7L622 706 aa17.23■□□□□ 0.35
EBF3-201ENST00000355311 FOXD4L4Q8WXT5 416 aaPredicted RBP17.23■□□□□ 0.35
EBF3-201ENST00000355311 NINLQ9Y2I6 1382 aa17.23■□□□□ 0.35
EBF3-201ENST00000355311 SLC4A2P04920 1241 aa17.22■□□□□ 0.35
EBF3-201ENST00000355311 NGDNQ8NEJ9 315 aaKnown RBP17.22■□□□□ 0.35
EBF3-201ENST00000355311 DTNBO60941 627 aa17.22■□□□□ 0.35
EBF3-201ENST00000355311 NLRP1Q9C000 1473 aa17.22■□□□□ 0.35
EBF3-201ENST00000355311 HSP90AB1P08238 724 aaKnown RBP17.22■□□□□ 0.35
EBF3-201ENST00000355311 GLIPR1L2Q4G1C9 344 aa17.22■□□□□ 0.35
EBF3-201ENST00000355311 NOL8Q76FK4 1167 aaKnown RBP17.22■□□□□ 0.35
EBF3-201ENST00000355311 HSCBQ8IWL3 235 aa17.22■□□□□ 0.35
EBF3-201ENST00000355311 ZMYM3Q14202 1370 aa17.21■□□□□ 0.35
EBF3-201ENST00000355311 CHAMP1Q96JM3 812 aa17.21■□□□□ 0.35
EBF3-201ENST00000355311 MEIS3Q99687 375 aa17.21■□□□□ 0.35
EBF3-201ENST00000355311 COL3A1P02461 1466 aaPredicted RBP17.21■□□□□ 0.35
EBF3-201ENST00000355311 PUS7Q96PZ0 661 aaKnown RBP17.21■□□□□ 0.35
EBF3-201ENST00000355311 AGLP35573 1532 aa17.21■□□□□ 0.34
EBF3-201ENST00000355311 TBC1D9Q6ZT07 1266 aa17.2■□□□□ 0.34
EBF3-201ENST00000355311 ARHGEF40Q8TER5 1519 aa17.2■□□□□ 0.34
EBF3-201ENST00000355311 LRRC7Q96NW7 1537 aa17.2■□□□□ 0.34
EBF3-201ENST00000355311 CFAP44Q96MT7 982 aa17.19■□□□□ 0.34
EBF3-201ENST00000355311 ROBO2Q9HCK4 1378 aa17.18■□□□□ 0.34
EBF3-201ENST00000355311 TMEM131LA2VDJ0 1609 aa17.18■□□□□ 0.34
EBF3-201ENST00000355311 AMPHP49418 695 aa17.18■□□□□ 0.34
EBF3-201ENST00000355311 XPCQ01831 940 aaPredicted RBP17.18■□□□□ 0.34
EBF3-201ENST00000355311 CPS1P31327 1500 aa17.18■□□□□ 0.34
EBF3-201ENST00000355311 MAP2P11137 1827 aaKnown RBP17.18■□□□□ 0.34
EBF3-201ENST00000355311 LMOD2Q6P5Q4 547 aa17.18■□□□□ 0.34
EBF3-201ENST00000355311 PNPLA6Q8IY17 1366 aa17.17■□□□□ 0.34
EBF3-201ENST00000355311 A2ML1A8K2U0 1454 aa17.17■□□□□ 0.34
EBF3-201ENST00000355311 ALDH1L2Q3SY69 923 aa17.17■□□□□ 0.34
EBF3-201ENST00000355311 FOXD4L6Q3SYB3 417 aaPredicted RBP17.17■□□□□ 0.34
EBF3-201ENST00000355311 FOXD4L3Q6VB84 417 aaPredicted RBP17.17■□□□□ 0.34
EBF3-201ENST00000355311 IFT57Q9NWB7 429 aa17.17■□□□□ 0.34
EBF3-201ENST00000355311 EXOC6BQ9Y2D4 811 aa17.16■□□□□ 0.34
EBF3-201ENST00000355311 TTC21BQ7Z4L5 1316 aa17.16■□□□□ 0.34
EBF3-201ENST00000355311 CT47B1P0C2W7 299 aaPredicted RBP17.16■□□□□ 0.34
EBF3-201ENST00000355311 GSPT1P15170 499 aaKnown RBP17.16■□□□□ 0.34
EBF3-201ENST00000355311 MTHFSDQ2M296 383 aaKnown RBP17.16■□□□□ 0.34
EBF3-201ENST00000355311 AMOTL2Q9Y2J4 779 aa17.16■□□□□ 0.34
EBF3-201ENST00000355311 ARHGAP31Q2M1Z3 1444 aa17.16■□□□□ 0.34
EBF3-201ENST00000355311 IL16Q14005 1332 aa17.16■□□□□ 0.34
EBF3-201ENST00000355311 GOLGA6L3A6NEY3 463 aa17.16■□□□□ 0.34
EBF3-201ENST00000355311 MCM4P33991 863 aa17.16■□□□□ 0.34
EBF3-201ENST00000355311 NLRP6P59044 892 aa17.16■□□□□ 0.34
EBF3-201ENST00000355311 TSPYL4Q9UJ04 414 aa17.16■□□□□ 0.34
EBF3-201ENST00000355311 PREX1Q8TCU6 1659 aa17.15■□□□□ 0.34
EBF3-201ENST00000355311 ANXA1P04083 346 aa17.14■□□□□ 0.33
EBF3-201ENST00000355311 FAM135BQ49AJ0 1406 aa17.14■□□□□ 0.33
EBF3-201ENST00000355311 L1TD1Q5T7N2 865 aaKnown RBP17.14■□□□□ 0.33
EBF3-201ENST00000355311 EIF2S2P20042 333 aaKnown RBP17.13■□□□□ 0.33
EBF3-201ENST00000355311 TRAK2O60296 914 aa17.13■□□□□ 0.33
EBF3-201ENST00000355311 ZNF853P0CG23 659 aa17.13■□□□□ 0.33
EBF3-201ENST00000355311 RTF1Q92541 710 aaKnown RBP17.13■□□□□ 0.33
EBF3-201ENST00000355311 ERBB4Q15303 1308 aa17.13■□□□□ 0.33
EBF3-201ENST00000355311 MAP3K19Q56UN5 1328 aa17.13■□□□□ 0.33
EBF3-201ENST00000355311 SETD1BQ9UPS6 1966 aaKnown RBP17.13■□□□□ 0.33
EBF3-201ENST00000355311 MAP4K4O95819 1239 aaPredicted RBP17.13■□□□□ 0.33
EBF3-201ENST00000355311 NCLP19338 710 aaKnown RBP17.12■□□□□ 0.33
EBF3-201ENST00000355311 PLEKHM2Q8IWE5 1019 aa17.11■□□□□ 0.33
EBF3-201ENST00000355311 CLTCQ00610 1675 aaKnown RBP17.11■□□□□ 0.33
EBF3-201ENST00000355311 GAS2L2Q8NHY3 880 aa17.11■□□□□ 0.33
EBF3-201ENST00000355311 KIF2CQ99661 725 aa17.11■□□□□ 0.33
EBF3-201ENST00000355311 EYA1Q99502 592 aa17.1■□□□□ 0.33
EBF3-201ENST00000355311 CHMP5Q9NZZ3 219 aa17.1■□□□□ 0.33
EBF3-201ENST00000355311 ZFYVE9O95405 1425 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms