RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 SBNO2Q9Y2G9 1366 aa13.82□□□□□ -0.2
SND1-201ENST00000354725 PPP2R1AP30153 589 aa13.81□□□□□ -0.2
SND1-201ENST00000354725 CHRM1P11229 460 aaPredicted RBP13.81□□□□□ -0.2
SND1-201ENST00000354725 ZNF830Q96NB3 372 aaPredicted RBP13.8□□□□□ -0.2
SND1-201ENST00000354725 PUS7Q96PZ0 661 aaKnown RBP13.8□□□□□ -0.2
SND1-201ENST00000354725 ADAMTS8Q9UP79 889 aa13.8□□□□□ -0.2
SND1-201ENST00000354725 ITSN1Q15811 1721 aa13.8□□□□□ -0.2
SND1-201ENST00000354725 ROBO1Q9Y6N7 1651 aa13.8□□□□□ -0.2
SND1-201ENST00000354725 MST1RQ04912 1400 aa13.79□□□□□ -0.2
SND1-201ENST00000354725 SENP3-EIF4A1A0A087X0R7 540 aa13.79□□□□□ -0.2
SND1-201ENST00000354725 FOXD4L5Q5VV16 416 aaPredicted RBP13.79□□□□□ -0.2
SND1-201ENST00000354725 FOXD4L4Q8WXT5 416 aaPredicted RBP13.79□□□□□ -0.2
SND1-201ENST00000354725 CRBNQ96SW2 442 aa13.79□□□□□ -0.2
SND1-201ENST00000354725 APPP05067 770 aa13.79□□□□□ -0.2
SND1-201ENST00000354725 CERKQ8TCT0 537 aa13.79□□□□□ -0.2
SND1-201ENST00000354725 DDRGK1Q96HY6 314 aa13.79□□□□□ -0.2
SND1-201ENST00000354725 TPM2P07951 284 aa13.78□□□□□ -0.2
SND1-201ENST00000354725 SMAP1Q8IYB5 467 aaPredicted RBP13.78□□□□□ -0.2
SND1-201ENST00000354725 SENP3Q9H4L4 574 aaPredicted RBP13.78□□□□□ -0.2
SND1-201ENST00000354725 TMEM51Q9NW97 253 aa13.78□□□□□ -0.2
SND1-201ENST00000354725 EIF3AQ14152 1382 aaKnown RBP13.78□□□□□ -0.2
SND1-201ENST00000354725 RBM25P49756 843 aaKnown RBP13.78□□□□□ -0.2
SND1-201ENST00000354725 CC2D1BQ5T0F9 858 aaKnown RBP13.78□□□□□ -0.2
SND1-201ENST00000354725 ZHX1Q9UKY1 873 aaPredicted RBP13.78□□□□□ -0.2
SND1-201ENST00000354725 AKAP12Q02952 1782 aa13.78□□□□□ -0.2
SND1-201ENST00000354725 RNF216Q9NWF9 866 aaPredicted RBP13.77□□□□□ -0.2
SND1-201ENST00000354725 TRPM3Q9HCF6 1732 aaPredicted RBP13.77□□□□□ -0.2
SND1-201ENST00000354725 KIF1AQ12756 1690 aa13.77□□□□□ -0.21
SND1-201ENST00000354725 AHDC1Q5TGY3 1603 aaPredicted RBP13.77□□□□□ -0.21
SND1-201ENST00000354725 C20orf194Q5TEA3 1177 aa13.77□□□□□ -0.21
SND1-201ENST00000354725 NRKQ7Z2Y5 1582 aa13.76□□□□□ -0.21
SND1-201ENST00000354725 SLFN5Q08AF3 891 aa13.76□□□□□ -0.21
SND1-201ENST00000354725 ATP7BP35670 1465 aa13.76□□□□□ -0.21
SND1-201ENST00000354725 PLIN1O60240 522 aa13.75□□□□□ -0.21
SND1-201ENST00000354725 WAPLQ7Z5K2 1190 aa13.75□□□□□ -0.21
SND1-201ENST00000354725 CRYBG1Q9Y4K1 1723 aa13.75□□□□□ -0.21
SND1-201ENST00000354725 KDM4AO75164 1064 aa13.74□□□□□ -0.21
SND1-201ENST00000354725 MARF1Q9Y4F3 1742 aaKnown RBP13.74□□□□□ -0.21
SND1-201ENST00000354725 CENPQQ7L2Z9 268 aaPredicted RBP13.74□□□□□ -0.21
SND1-201ENST00000354725 COL16A1Q07092 1604 aaPredicted RBP13.73□□□□□ -0.21
SND1-201ENST00000354725 USP54Q70EL1 1684 aa13.73□□□□□ -0.21
SND1-201ENST00000354725 C8orf34Q49A92 452 aa13.73□□□□□ -0.21
SND1-201ENST00000354725 ANKARQ7Z5J8 1434 aa13.73□□□□□ -0.21
SND1-201ENST00000354725 MON2Q7Z3U7 1717 aa13.73□□□□□ -0.21
SND1-201ENST00000354725 CDCA8Q53HL2 280 aa13.73□□□□□ -0.21
SND1-201ENST00000354725 PRAM1Q96QH2 718 aa13.73□□□□□ -0.21
SND1-201ENST00000354725 C1orf167Q5SNV9 1468 aa13.72□□□□□ -0.21
SND1-201ENST00000354725 POLR3AO14802 1390 aaPredicted RBP13.72□□□□□ -0.21
SND1-201ENST00000354725 RBM33Q96EV2 1170 aaKnown RBP13.72□□□□□ -0.21
SND1-201ENST00000354725 PROSER2Q86WR7 435 aaPredicted RBP13.72□□□□□ -0.21
SND1-201ENST00000354725 TRAK1Q9UPV9 953 aa13.71□□□□□ -0.21
SND1-201ENST00000354725 ALS2Q96Q42 1657 aa13.71□□□□□ -0.21
SND1-201ENST00000354725 ANKRD26Q9UPS8 1709 aa13.71□□□□□ -0.21
SND1-201ENST00000354725 L1TD1Q5T7N2 865 aaKnown RBP13.71□□□□□ -0.22
SND1-201ENST00000354725 NGEFQ8N5V2 710 aa13.71□□□□□ -0.22
SND1-201ENST00000354725 C19orf44Q9H6X5 657 aa13.71□□□□□ -0.22
SND1-201ENST00000354725 NINLQ9Y2I6 1382 aa13.7□□□□□ -0.22
SND1-201ENST00000354725 STK26Q9P289 416 aa13.7□□□□□ -0.22
SND1-201ENST00000354725 COL22A1Q8NFW1 1626 aaPredicted RBP13.7□□□□□ -0.22
SND1-201ENST00000354725 CD163L1Q9NR16 1453 aa13.7□□□□□ -0.22
SND1-201ENST00000354725 GOLGA2Q08379 1002 aa13.69□□□□□ -0.22
SND1-201ENST00000354725 UTP14CQ5TAP6 766 aaKnown RBP13.69□□□□□ -0.22
SND1-201ENST00000354725 PIAS4Q8N2W9 510 aaPredicted RBP13.69□□□□□ -0.22
SND1-201ENST00000354725 PHF23Q9BUL5 403 aaPredicted RBP13.69□□□□□ -0.22
SND1-201ENST00000354725 PXDNQ92626 1479 aa13.69□□□□□ -0.22
SND1-201ENST00000354725 MSH6P52701 1360 aa13.69□□□□□ -0.22
SND1-201ENST00000354725 PHLPP1O60346 1717 aa13.69□□□□□ -0.22
SND1-201ENST00000354725 ABCA3Q99758 1704 aa13.69□□□□□ -0.22
SND1-201ENST00000354725 KNSTRNQ9Y448 316 aa13.69□□□□□ -0.22
SND1-201ENST00000354725 SPINK5Q9NQ38 1064 aaPredicted RBP13.68□□□□□ -0.22
SND1-201ENST00000354725 PRR36Q9H6K5 1346 aa13.68□□□□□ -0.22
SND1-201ENST00000354725 FRAT2O75474 233 aaPredicted RBP13.68□□□□□ -0.22
SND1-201ENST00000354725 PTMAP06454 111 aaKnown RBP13.67□□□□□ -0.22
SND1-201ENST00000354725 SKAP1Q86WV1 359 aa13.67□□□□□ -0.22
SND1-201ENST00000354725 PPP4R3BQ5MIZ7 849 aa13.67□□□□□ -0.22
SND1-201ENST00000354725 E9PSI1 815 aa13.67□□□□□ -0.22
SND1-201ENST00000354725 CARD14Q9BXL6 1004 aa13.66□□□□□ -0.22
SND1-201ENST00000354725 MAP7D2Q96T17 732 aa13.66□□□□□ -0.22
SND1-201ENST00000354725 RAD21O60216 631 aa13.65□□□□□ -0.22
SND1-201ENST00000354725 MYCNP04198 464 aaPredicted RBP13.65□□□□□ -0.22
SND1-201ENST00000354725 WASLO00401 505 aaPredicted RBP13.65□□□□□ -0.22
SND1-201ENST00000354725 ZBTB22O15209 634 aa13.65□□□□□ -0.22
SND1-201ENST00000354725 FAM161AQ3B820 660 aa13.65□□□□□ -0.22
SND1-201ENST00000354725 MPNDQ8N594 471 aa13.65□□□□□ -0.22
SND1-201ENST00000354725 ANAPC15P60006 121 aa13.65□□□□□ -0.23
SND1-201ENST00000354725 DMTNQ08495 405 aa13.65□□□□□ -0.23
SND1-201ENST00000354725 SSH2Q76I76 1423 aa13.64□□□□□ -0.23
SND1-201ENST00000354725 USP19O94966 1318 aa13.64□□□□□ -0.23
SND1-201ENST00000354725 ZBTB7CA1YPR0 619 aa13.63□□□□□ -0.23
SND1-201ENST00000354725 WDR43Q15061 677 aaKnown RBP eCLIP13.63□□□□□ -0.236e-7■□□□□ 9.9
SND1-201ENST00000354725 CPSF1Q10570 1443 aaKnown RBP13.63□□□□□ -0.23
SND1-201ENST00000354725 SLAIN2Q9P270 581 aa13.62□□□□□ -0.23
SND1-201ENST00000354725 CADPS2Q86UW7 1296 aa13.62□□□□□ -0.23
SND1-201ENST00000354725 MED1Q15648 1581 aaPredicted RBP13.62□□□□□ -0.23
SND1-201ENST00000354725 PIK3C2AO00443 1686 aa13.62□□□□□ -0.23
SND1-201ENST00000354725 BRINP3Q76B58 766 aa13.62□□□□□ -0.23
SND1-201ENST00000354725 PDE3AQ14432 1141 aa13.61□□□□□ -0.23
SND1-201ENST00000354725 GPATCH11Q8N954 259 aa13.61□□□□□ -0.23
SND1-201ENST00000354725 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.6□□□□□ -0.23
SND1-201ENST00000354725 RGS22Q8NE09 1264 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms