RNA–Protein interactions for RNA: ENST00000353487.6

SPPL3-201, Transcript of signal peptide peptidase like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPPL3, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-201ENST00000353487 ZKSCAN5Q9Y2L8 839 aa17.25■□□□□ 0.35
SPPL3-201ENST00000353487 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.25■□□□□ 0.35
SPPL3-201ENST00000353487 CCDC94Q9BW85 323 aaPredicted RBP17.25■□□□□ 0.35
SPPL3-201ENST00000353487 PRKAR2BP31323 418 aa17.25■□□□□ 0.35
SPPL3-201ENST00000353487 CHAMP1Q96JM3 812 aa17.24■□□□□ 0.35
SPPL3-201ENST00000353487 LARP6Q9BRS8 491 aaKnown RBP17.24■□□□□ 0.35
SPPL3-201ENST00000353487 API5Q9BZZ5 524 aaKnown RBP17.24■□□□□ 0.35
SPPL3-201ENST00000353487 SMC3Q9UQE7 1217 aa17.24■□□□□ 0.35
SPPL3-201ENST00000353487 CWC22Q9HCG8 908 aaKnown RBP17.24■□□□□ 0.35
SPPL3-201ENST00000353487 CEP170Q5SW79 1584 aa17.24■□□□□ 0.35
SPPL3-201ENST00000353487 LEKR1Q6ZMV7 388 aa17.23■□□□□ 0.35
SPPL3-201ENST00000353487 FAM177A1Q8N128 213 aaPredicted RBP17.23■□□□□ 0.35
SPPL3-201ENST00000353487 C17orf53Q8N3J3 647 aaPredicted RBP17.23■□□□□ 0.35
SPPL3-201ENST00000353487 NUTM2FA1L443 756 aa17.23■□□□□ 0.35
SPPL3-201ENST00000353487 TTLL5Q6EMB2 1281 aa17.23■□□□□ 0.35
SPPL3-201ENST00000353487 ZGPATQ8N5A5 531 aaKnown RBP17.23■□□□□ 0.35
SPPL3-201ENST00000353487 C16orf45Q96MC5 204 aaPredicted RBP17.23■□□□□ 0.35
SPPL3-201ENST00000353487 GTF2A1P52655 376 aaPredicted RBP17.22■□□□□ 0.35
SPPL3-201ENST00000353487 HSP90B2PQ58FF3 399 aa17.22■□□□□ 0.35
SPPL3-201ENST00000353487 PLCD4Q9BRC7 762 aa17.22■□□□□ 0.35
SPPL3-201ENST00000353487 TMPOP42166 694 aaKnown RBP17.22■□□□□ 0.35
SPPL3-201ENST00000353487 FOSBP53539 338 aa17.22■□□□□ 0.35
SPPL3-201ENST00000353487 SMC5Q8IY18 1101 aa17.22■□□□□ 0.35
SPPL3-201ENST00000353487 BICD2Q8TD16 824 aa17.22■□□□□ 0.35
SPPL3-201ENST00000353487 ATP6V1DQ9Y5K8 247 aa17.22■□□□□ 0.35
SPPL3-201ENST00000353487 STK31Q9BXU1 1019 aa17.21■□□□□ 0.35
SPPL3-201ENST00000353487 DNAJC2Q99543 621 aaKnown RBP17.21■□□□□ 0.35
SPPL3-201ENST00000353487 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.21■□□□□ 0.35
SPPL3-201ENST00000353487 V9GYY5 206 aaPredicted RBP17.21■□□□□ 0.35
SPPL3-201ENST00000353487 RALGAPBQ86X10 1494 aa17.2■□□□□ 0.34
SPPL3-201ENST00000353487 RDXP35241 583 aaKnown RBP17.2■□□□□ 0.34
SPPL3-201ENST00000353487 EVC2Q86UK5 1308 aa17.2■□□□□ 0.34
SPPL3-201ENST00000353487 TWISTNBQ3B726 338 aaPredicted RBP17.2■□□□□ 0.34
SPPL3-201ENST00000353487 FMNL2Q96PY5 1086 aa17.2■□□□□ 0.34
SPPL3-201ENST00000353487 BMP2KLQ5H9B9 411 aa17.19■□□□□ 0.34
SPPL3-201ENST00000353487 GPRASP1Q5JY77 1395 aa17.19■□□□□ 0.34
SPPL3-201ENST00000353487 HCLS1P14317 486 aaPredicted RBP17.19■□□□□ 0.34
SPPL3-201ENST00000353487 GTPBP4Q9BZE4 634 aaKnown RBP17.19■□□□□ 0.34
SPPL3-201ENST00000353487 ERC2O15083 957 aa17.19■□□□□ 0.34
SPPL3-201ENST00000353487 MAP4K4O95819 1239 aaPredicted RBP17.19■□□□□ 0.34
SPPL3-201ENST00000353487 DNMT1P26358 1616 aaKnown RBP17.18■□□□□ 0.34
SPPL3-201ENST00000353487 ADCY5O95622 1261 aa17.18■□□□□ 0.34
SPPL3-201ENST00000353487 FILIP1Q7Z7B0 1213 aa17.18■□□□□ 0.34
SPPL3-201ENST00000353487 TPM4P67936 248 aa17.18■□□□□ 0.34
SPPL3-201ENST00000353487 TSHZ3Q63HK5 1081 aa17.18■□□□□ 0.34
SPPL3-201ENST00000353487 SNX21Q969T3 373 aa17.17■□□□□ 0.34
SPPL3-201ENST00000353487 C16orf71Q8IYS4 520 aaPredicted RBP17.17■□□□□ 0.34
SPPL3-201ENST00000353487 TSPYL1Q9H0U9 437 aa17.17■□□□□ 0.34
SPPL3-201ENST00000353487 U2AF2P26368 475 aaKnown RBP eCLIP17.17■□□□□ 0.342e-6■■□□□ 12
SPPL3-201ENST00000353487 LRSAM1Q6UWE0 723 aa17.17■□□□□ 0.34
SPPL3-201ENST00000353487 NSD3Q9BZ95 1437 aa17.17■□□□□ 0.34
SPPL3-201ENST00000353487 GNAI1P63096 354 aa17.16■□□□□ 0.34
SPPL3-201ENST00000353487 NUCB1Q02818 461 aa17.16■□□□□ 0.34
SPPL3-201ENST00000353487 NOLC1Q14978 699 aaKnown RBP eCLIP17.16■□□□□ 0.34
SPPL3-201ENST00000353487 NOL7Q9UMY1 257 aaKnown RBP17.16■□□□□ 0.34
SPPL3-201ENST00000353487 CCDC141Q6ZP82 1450 aa17.16■□□□□ 0.34
SPPL3-201ENST00000353487 SF3A1Q15459 793 aaKnown RBP17.16■□□□□ 0.34
SPPL3-201ENST00000353487 CAMK4Q16566 473 aa17.16■□□□□ 0.34
SPPL3-201ENST00000353487 C10orf67Q8IYJ2 551 aa17.16■□□□□ 0.34
SPPL3-201ENST00000353487 DDX54Q8TDD1 881 aaKnown RBP17.16■□□□□ 0.34
SPPL3-201ENST00000353487 KDM5BQ9UGL1 1544 aa17.16■□□□□ 0.34
SPPL3-201ENST00000353487 CENPHQ9H3R5 247 aa17.15■□□□□ 0.34
SPPL3-201ENST00000353487 CCDC9Q9Y3X0 531 aaKnown RBP17.15■□□□□ 0.34
SPPL3-201ENST00000353487 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.15■□□□□ 0.34
SPPL3-201ENST00000353487 DTNBO60941 627 aa17.15■□□□□ 0.34
SPPL3-201ENST00000353487 AK7Q96M32 723 aa17.15■□□□□ 0.34
SPPL3-201ENST00000353487 HDAC1Q13547 482 aaPredicted RBP17.15■□□□□ 0.34
SPPL3-201ENST00000353487 PKP1Q13835 747 aa17.15■□□□□ 0.34
SPPL3-201ENST00000353487 CD2BP2O95400 341 aaKnown RBP17.14■□□□□ 0.33
SPPL3-201ENST00000353487 EXOC6BQ9Y2D4 811 aa17.14■□□□□ 0.33
SPPL3-201ENST00000353487 NUP160Q12769 1436 aa17.14■□□□□ 0.33
SPPL3-201ENST00000353487 KIF20AO95235 890 aa17.14■□□□□ 0.33
SPPL3-201ENST00000353487 TPM3P06753 285 aa17.14■□□□□ 0.33
SPPL3-201ENST00000353487 FERMT3Q86UX7 667 aa17.14■□□□□ 0.33
SPPL3-201ENST00000353487 SCAPERQ9BY12 1400 aa17.14■□□□□ 0.33
SPPL3-201ENST00000353487 CEBPZQ03701 1054 aaKnown RBP17.13■□□□□ 0.33
SPPL3-201ENST00000353487 LMOD3Q0VAK6 560 aa17.13■□□□□ 0.33
SPPL3-201ENST00000353487 H3BQV1 296 aa17.13■□□□□ 0.33
SPPL3-201ENST00000353487 FKBP5Q13451 457 aaPredicted RBP17.13■□□□□ 0.33
SPPL3-201ENST00000353487 IFFO2Q5TF58 517 aa17.13■□□□□ 0.33
SPPL3-201ENST00000353487 DCTN1Q14203 1278 aa17.12■□□□□ 0.33
SPPL3-201ENST00000353487 TRMT1Q9NXH9 659 aaKnown RBP17.12■□□□□ 0.33
SPPL3-201ENST00000353487 GCC2Q8IWJ2 1684 aa17.12■□□□□ 0.33
SPPL3-201ENST00000353487 FBLN1P23142 703 aa17.12■□□□□ 0.33
SPPL3-201ENST00000353487 ZMYM4Q5VZL5 1548 aa17.12■□□□□ 0.33
SPPL3-201ENST00000353487 PES1O00541 588 aaKnown RBP17.12■□□□□ 0.33
SPPL3-201ENST00000353487 CARD14Q9BXL6 1004 aa17.12■□□□□ 0.33
SPPL3-201ENST00000353487 WDR33Q9C0J8 1336 aaKnown RBP17.11■□□□□ 0.33
SPPL3-201ENST00000353487 ZNF428Q96B54 188 aa17.11■□□□□ 0.33
SPPL3-201ENST00000353487 MCM5P33992 734 aa17.11■□□□□ 0.33
SPPL3-201ENST00000353487 AXDND1Q5T1B0 1012 aaPredicted RBP17.11■□□□□ 0.33
SPPL3-201ENST00000353487 GIMAP6Q6P9H5 292 aa17.11■□□□□ 0.33
SPPL3-201ENST00000353487 BLMP54132 1417 aaPredicted RBP17.1■□□□□ 0.33
SPPL3-201ENST00000353487 CT47B1P0C2W7 299 aaPredicted RBP17.1■□□□□ 0.33
SPPL3-201ENST00000353487 SYCP2Q9BX26 1530 aa17.1■□□□□ 0.33
SPPL3-201ENST00000353487 MEX3CQ5U5Q3 659 aaKnown RBP17.1■□□□□ 0.33
SPPL3-201ENST00000353487 NOL10Q9BSC4 688 aaKnown RBP17.1■□□□□ 0.33
SPPL3-201ENST00000353487 SRRTQ9BXP5 876 aaKnown RBP17.1■□□□□ 0.33
SPPL3-201ENST00000353487 IL1RAPL2Q9NP60 686 aa17.1■□□□□ 0.33
SPPL3-201ENST00000353487 JARID2Q92833 1246 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms