RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 CCDC57Q2TAC2 916 aa11.86□□□□□ -0.51
COL11A1-201ENST00000353414 NOB1Q9ULX3 412 aaKnown RBP11.86□□□□□ -0.51
COL11A1-201ENST00000353414 VPS8Q8N3P4 1428 aa11.86□□□□□ -0.51
COL11A1-201ENST00000353414 BCAR3O75815 825 aa11.86□□□□□ -0.51
COL11A1-201ENST00000353414 DNA2P51530 1060 aa11.86□□□□□ -0.51
COL11A1-201ENST00000353414 UBA5Q9GZZ9 404 aa11.86□□□□□ -0.51
COL11A1-201ENST00000353414 LRP2BPQ9P2M1 347 aa11.86□□□□□ -0.51
COL11A1-201ENST00000353414 PTCD1O75127 700 aaKnown RBP11.86□□□□□ -0.51
COL11A1-201ENST00000353414 RRS1Q15050 365 aaKnown RBP11.86□□□□□ -0.51
COL11A1-201ENST00000353414 PLEKHO1Q53GL0 409 aaPredicted RBP11.86□□□□□ -0.51
COL11A1-201ENST00000353414 ANKIB1Q9P2G1 1089 aa11.86□□□□□ -0.51
COL11A1-201ENST00000353414 SLC4A2P04920 1241 aa11.85□□□□□ -0.51
COL11A1-201ENST00000353414 SMARCE1Q969G3 411 aa11.85□□□□□ -0.51
COL11A1-201ENST00000353414 PRAM1Q96QH2 718 aa11.85□□□□□ -0.51
COL11A1-201ENST00000353414 PHLDB1Q86UU1 1377 aa11.85□□□□□ -0.51
COL11A1-201ENST00000353414 MYO6Q9UM54 1294 aa11.85□□□□□ -0.51
COL11A1-201ENST00000353414 ATAD2BQ9ULI0 1458 aa11.85□□□□□ -0.51
COL11A1-201ENST00000353414 ZNF644Q9H582 1327 aaPredicted RBP11.85□□□□□ -0.51
COL11A1-201ENST00000353414 PRKAR2BP31323 418 aa11.85□□□□□ -0.51
COL11A1-201ENST00000353414 ME1P48163 572 aa11.85□□□□□ -0.51
COL11A1-201ENST00000353414 CCDC82Q8N4S0 544 aa11.85□□□□□ -0.51
COL11A1-201ENST00000353414 ARGLU1Q9NWB6 273 aaPredicted RBP11.85□□□□□ -0.51
COL11A1-201ENST00000353414 SULT6B1Q6IMI4 303 aa11.84□□□□□ -0.51
COL11A1-201ENST00000353414 MINDY4BA8MYZ0 360 aa11.84□□□□□ -0.51
COL11A1-201ENST00000353414 IDH1O75874 414 aaKnown RBP11.84□□□□□ -0.51
COL11A1-201ENST00000353414 CT47B1P0C2W7 299 aaPredicted RBP11.84□□□□□ -0.51
COL11A1-201ENST00000353414 ERC1Q8IUD2 1116 aa11.84□□□□□ -0.51
COL11A1-201ENST00000353414 SLC26A8Q96RN1 970 aa11.84□□□□□ -0.51
COL11A1-201ENST00000353414 SMG6Q86US8 1419 aaKnown RBP11.84□□□□□ -0.51
COL11A1-201ENST00000353414 LRRFIP2Q9Y608 721 aaKnown RBP11.84□□□□□ -0.51
COL11A1-201ENST00000353414 RAPGEF2Q9Y4G8 1499 aa11.84□□□□□ -0.51
COL11A1-201ENST00000353414 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.84□□□□□ -0.51
COL11A1-201ENST00000353414 ACBD3Q9H3P7 528 aa11.83□□□□□ -0.51
COL11A1-201ENST00000353414 CWC27Q6UX04 472 aaKnown RBP11.83□□□□□ -0.52
COL11A1-201ENST00000353414 BTBD11A6QL63 1104 aa11.83□□□□□ -0.52
COL11A1-201ENST00000353414 PUS7Q96PZ0 661 aaKnown RBP11.83□□□□□ -0.52
COL11A1-201ENST00000353414 CHMP5Q9NZZ3 219 aa11.83□□□□□ -0.52
COL11A1-201ENST00000353414 HDGFL1Q5TGJ6 251 aa11.83□□□□□ -0.52
COL11A1-201ENST00000353414 GAPVD1Q14C86 1478 aa11.83□□□□□ -0.52
COL11A1-201ENST00000353414 DHX57Q6P158 1386 aaKnown RBP11.83□□□□□ -0.52
COL11A1-201ENST00000353414 NASPP49321 788 aaPredicted RBP11.83□□□□□ -0.52
COL11A1-201ENST00000353414 AACSQ86V21 672 aa11.83□□□□□ -0.52
COL11A1-201ENST00000353414 USHBP1Q8N6Y0 703 aa11.83□□□□□ -0.52
COL11A1-201ENST00000353414 DCTN1Q14203 1278 aa11.82□□□□□ -0.52
COL11A1-201ENST00000353414 CRACR2BQ8N4Y2 399 aaPredicted RBP11.82□□□□□ -0.52
COL11A1-201ENST00000353414 DDX11Q96FC9 970 aa11.82□□□□□ -0.52
COL11A1-201ENST00000353414 CDC45O75419 566 aa11.82□□□□□ -0.52
COL11A1-201ENST00000353414 ZNF530Q6P9A1 599 aaPredicted RBP11.82□□□□□ -0.52
COL11A1-201ENST00000353414 MRC2Q9UBG0 1479 aa11.82□□□□□ -0.52
COL11A1-201ENST00000353414 POLR3DP05423 398 aaPredicted RBP11.82□□□□□ -0.52
COL11A1-201ENST00000353414 ZRSR2Q15696 482 aaKnown RBP11.82□□□□□ -0.52
COL11A1-201ENST00000353414 ZNHIT6Q9NWK9 470 aaKnown RBP11.82□□□□□ -0.52
COL11A1-201ENST00000353414 CDCA7LQ96GN5 454 aa11.81□□□□□ -0.52
COL11A1-201ENST00000353414 CCDC113Q9H0I3 377 aa11.81□□□□□ -0.52
COL11A1-201ENST00000353414 EXOSC9Q06265 439 aaKnown RBP11.81□□□□□ -0.52
COL11A1-201ENST00000353414 HMGN5P82970 282 aaKnown RBP11.81□□□□□ -0.52
COL11A1-201ENST00000353414 IL1RAPL2Q9NP60 686 aa11.81□□□□□ -0.52
COL11A1-201ENST00000353414 PRDM11Q9NQV5 511 aa11.81□□□□□ -0.52
COL11A1-201ENST00000353414 PPFIBP1Q86W92 1011 aa11.81□□□□□ -0.52
COL11A1-201ENST00000353414 GBP2P32456 591 aaPredicted RBP11.8□□□□□ -0.52
COL11A1-201ENST00000353414 MPRIPQ6WCQ1 1025 aa11.8□□□□□ -0.52
COL11A1-201ENST00000353414 FAM43AQ8N2R8 423 aa11.8□□□□□ -0.52
COL11A1-201ENST00000353414 VTI1AQ96AJ9 217 aa11.8□□□□□ -0.52
COL11A1-201ENST00000353414 ERLIN2O94905 339 aa11.8□□□□□ -0.52
COL11A1-201ENST00000353414 ZPR1O75312 459 aa11.8□□□□□ -0.52
COL11A1-201ENST00000353414 NUCB2P80303 420 aa11.8□□□□□ -0.52
COL11A1-201ENST00000353414 CDK19Q9BWU1 502 aa11.8□□□□□ -0.52
COL11A1-201ENST00000353414 GNAI2P04899 355 aa11.8□□□□□ -0.52
COL11A1-201ENST00000353414 ANAPC15P60006 121 aa11.8□□□□□ -0.52
COL11A1-201ENST00000353414 SERPINA10Q9UK55 444 aa11.8□□□□□ -0.52
COL11A1-201ENST00000353414 GUCY1B3Q02153 619 aa11.8□□□□□ -0.52
COL11A1-201ENST00000353414 TWISTNBQ3B726 338 aaPredicted RBP11.8□□□□□ -0.52
COL11A1-201ENST00000353414 DRC1Q96MC2 740 aa11.79□□□□□ -0.52
COL11A1-201ENST00000353414 NACAP1Q9BZK3 213 aa11.79□□□□□ -0.52
COL11A1-201ENST00000353414 TSPY26PQ9H489 355 aa11.79□□□□□ -0.52
COL11A1-201ENST00000353414 ADAMTS8Q9UP79 889 aa11.79□□□□□ -0.52
COL11A1-201ENST00000353414 CCDC96Q2M329 555 aa11.79□□□□□ -0.52
COL11A1-201ENST00000353414 LARP6Q9BRS8 491 aaKnown RBP11.79□□□□□ -0.52
COL11A1-201ENST00000353414 UBAC1Q9BSL1 405 aa11.79□□□□□ -0.52
COL11A1-201ENST00000353414 GOLGA6L10A6NI86 522 aa11.79□□□□□ -0.52
COL11A1-201ENST00000353414 PPFIA3O75145 1194 aa11.79□□□□□ -0.52
COL11A1-201ENST00000353414 CAMK4Q16566 473 aa11.79□□□□□ -0.52
COL11A1-201ENST00000353414 TRIM22Q8IYM9 498 aa11.79□□□□□ -0.52
COL11A1-201ENST00000353414 MACROD2A1Z1Q3 448 aa11.79□□□□□ -0.52
COL11A1-201ENST00000353414 RBM25P49756 843 aaKnown RBP11.79□□□□□ -0.52
COL11A1-201ENST00000353414 TERF1P54274 439 aa11.79□□□□□ -0.52
COL11A1-201ENST00000353414 NUTM1Q86Y26 1132 aa11.79□□□□□ -0.52
COL11A1-201ENST00000353414 ZNF396Q96N95 335 aaPredicted RBP11.79□□□□□ -0.52
COL11A1-201ENST00000353414 PRKRIP1Q9H875 184 aaPredicted RBP11.79□□□□□ -0.52
COL11A1-201ENST00000353414 CCDC144CPQ8IYA2 1237 aa11.79□□□□□ -0.52
COL11A1-201ENST00000353414 CTNNBL1Q8WYA6 563 aaPredicted RBP11.79□□□□□ -0.52
COL11A1-201ENST00000353414 MMRN2Q9H8L6 949 aa11.79□□□□□ -0.52
COL11A1-201ENST00000353414 GOPCQ9HD26 462 aa11.79□□□□□ -0.52
COL11A1-201ENST00000353414 TOP2AP11388 1531 aaKnown RBP11.78□□□□□ -0.52
COL11A1-201ENST00000353414 VAT1LQ9HCJ6 419 aa11.78□□□□□ -0.52
COL11A1-201ENST00000353414 COMMD10Q9Y6G5 202 aa11.78□□□□□ -0.52
COL11A1-201ENST00000353414 STIM1Q13586 685 aa11.78□□□□□ -0.52
COL11A1-201ENST00000353414 ARHGAP5Q13017 1502 aa11.78□□□□□ -0.52
COL11A1-201ENST00000353414 CFAP70Q5T0N1 1121 aa11.78□□□□□ -0.52
COL11A1-201ENST00000353414 KLHL10Q6JEL2 608 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms