RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 IL27Q8NEV9 243 aa19.17■□□□□ 0.66
PTPN11-201ENST00000351677 TRIM5Q9C035 493 aa19.17■□□□□ 0.66
PTPN11-201ENST00000351677 NAT10Q9H0A0 1025 aaKnown RBP19.17■□□□□ 0.66
PTPN11-201ENST00000351677 NUDT16Q96DE0 195 aaKnown RBP19.16■□□□□ 0.66
PTPN11-201ENST00000351677 CYP46A1Q9Y6A2 500 aa19.16■□□□□ 0.66
PTPN11-201ENST00000351677 GPS2Q13227 327 aa19.16■□□□□ 0.66
PTPN11-201ENST00000351677 SRGAP3O43295 1099 aa19.16■□□□□ 0.66
PTPN11-201ENST00000351677 PDCP20941 246 aa19.16■□□□□ 0.66
PTPN11-201ENST00000351677 OLFM4Q6UX06 510 aa19.16■□□□□ 0.66
PTPN11-201ENST00000351677 DCTN1Q14203 1278 aa19.16■□□□□ 0.66
PTPN11-201ENST00000351677 CUL7Q14999 1698 aa19.15■□□□□ 0.66
PTPN11-201ENST00000351677 CABP4P57796 275 aa19.15■□□□□ 0.66
PTPN11-201ENST00000351677 SAMD1Q6SPF0 538 aaPredicted RBP19.15■□□□□ 0.66
PTPN11-201ENST00000351677 LETM1O95202 739 aaPredicted RBP19.15■□□□□ 0.66
PTPN11-201ENST00000351677 TTC39AQ5SRH9 613 aa19.15■□□□□ 0.66
PTPN11-201ENST00000351677 CWC22Q9HCG8 908 aaKnown RBP19.15■□□□□ 0.66
PTPN11-201ENST00000351677 RRP12Q5JTH9 1297 aaKnown RBP19.15■□□□□ 0.66
PTPN11-201ENST00000351677 PDILTQ8N807 584 aa19.15■□□□□ 0.66
PTPN11-201ENST00000351677 MCM10Q7L590 875 aa19.14■□□□□ 0.65
PTPN11-201ENST00000351677 KINO60870 393 aaKnown RBP19.14■□□□□ 0.65
PTPN11-201ENST00000351677 RARSP54136 660 aaKnown RBP19.14■□□□□ 0.65
PTPN11-201ENST00000351677 CNNM1Q9NRU3 951 aa19.14■□□□□ 0.65
PTPN11-201ENST00000351677 CTDP1Q9Y5B0 961 aaPredicted RBP19.14■□□□□ 0.65
PTPN11-201ENST00000351677 XPCQ01831 940 aaPredicted RBP19.14■□□□□ 0.65
PTPN11-201ENST00000351677 DDX54Q8TDD1 881 aaKnown RBP19.14■□□□□ 0.65
PTPN11-201ENST00000351677 FMNL2Q96PY5 1086 aa19.14■□□□□ 0.65
PTPN11-201ENST00000351677 BRMS1Q9HCU9 246 aa19.13■□□□□ 0.65
PTPN11-201ENST00000351677 AACSQ86V21 672 aa19.13■□□□□ 0.65
PTPN11-201ENST00000351677 SSH1Q8WYL5 1049 aa19.13■□□□□ 0.65
PTPN11-201ENST00000351677 BTBD11A6QL63 1104 aa19.13■□□□□ 0.65
PTPN11-201ENST00000351677 CCDC158Q5M9N0 1113 aa19.13■□□□□ 0.65
PTPN11-201ENST00000351677 MAP3K1Q13233 1512 aa19.13■□□□□ 0.65
PTPN11-201ENST00000351677 NCOA1Q15788 1441 aa19.12■□□□□ 0.65
PTPN11-201ENST00000351677 XBP1P17861 261 aa19.12■□□□□ 0.65
PTPN11-201ENST00000351677 SART3Q15020 963 aaKnown RBP19.12■□□□□ 0.65
PTPN11-201ENST00000351677 ADGRF5Q8IZF2 1346 aa19.12■□□□□ 0.65
PTPN11-201ENST00000351677 CWC27Q6UX04 472 aaKnown RBP19.12■□□□□ 0.65
PTPN11-201ENST00000351677 CCDC61Q9Y6R9 512 aa19.12■□□□□ 0.65
PTPN11-201ENST00000351677 MNS1Q8NEH6 495 aa19.12■□□□□ 0.65
PTPN11-201ENST00000351677 EXOC6BQ9Y2D4 811 aa19.12■□□□□ 0.65
PTPN11-201ENST00000351677 KIF14Q15058 1648 aa19.11■□□□□ 0.65
PTPN11-201ENST00000351677 MPNDQ8N594 471 aa19.11■□□□□ 0.65
PTPN11-201ENST00000351677 TOM1L2Q6ZVM7 507 aa19.11■□□□□ 0.65
PTPN11-201ENST00000351677 STK11IPQ8N1F8 1099 aa19.11■□□□□ 0.65
PTPN11-201ENST00000351677 CCDC173Q0VFZ6 552 aa19.11■□□□□ 0.65
PTPN11-201ENST00000351677 SPC24Q8NBT2 197 aa19.11■□□□□ 0.65
PTPN11-201ENST00000351677 SMC2O95347 1197 aa19.1■□□□□ 0.65
PTPN11-201ENST00000351677 RPAP2Q8IXW5 612 aaPredicted RBP19.1■□□□□ 0.65
PTPN11-201ENST00000351677 NKTRP30414 1462 aaKnown RBP19.1■□□□□ 0.65
PTPN11-201ENST00000351677 SMARCA5O60264 1052 aaPredicted RBP19.09■□□□□ 0.65
PTPN11-201ENST00000351677 NUTM1Q86Y26 1132 aa19.09■□□□□ 0.65
PTPN11-201ENST00000351677 WDR33Q9C0J8 1336 aaKnown RBP19.09■□□□□ 0.65
PTPN11-201ENST00000351677 MCM4P33991 863 aa19.09■□□□□ 0.65
PTPN11-201ENST00000351677 STK38Q15208 465 aa19.09■□□□□ 0.65
PTPN11-201ENST00000351677 DNAJC5BQ9UF47 199 aa19.09■□□□□ 0.65
PTPN11-201ENST00000351677 SPG7Q9UQ90 795 aa19.09■□□□□ 0.65
PTPN11-201ENST00000351677 DUSP27Q5VZP5 1158 aa19.09■□□□□ 0.65
PTPN11-201ENST00000351677 NAP1L1P55209 391 aaKnown RBP19.08■□□□□ 0.65
PTPN11-201ENST00000351677 NME9Q86XW9 330 aa19.08■□□□□ 0.65
PTPN11-201ENST00000351677 GRPEL1Q9HAV7 217 aa19.08■□□□□ 0.65
PTPN11-201ENST00000351677 GNAT3A8MTJ3 354 aa19.08■□□□□ 0.65
PTPN11-201ENST00000351677 ZNF396Q96N95 335 aaPredicted RBP19.08■□□□□ 0.65
PTPN11-201ENST00000351677 BICRAQ9NZM4 1560 aa19.08■□□□□ 0.64
PTPN11-201ENST00000351677 JAKMIP1Q96N16 626 aaKnown RBP19.07■□□□□ 0.64
PTPN11-201ENST00000351677 RPRD2Q5VT52 1461 aaKnown RBP19.07■□□□□ 0.64
PTPN11-201ENST00000351677 LARP1BQ659C4 914 aaKnown RBP19.07■□□□□ 0.64
PTPN11-201ENST00000351677 AEBP1Q8IUX7 1158 aa19.07■□□□□ 0.64
PTPN11-201ENST00000351677 FKBP4Q02790 459 aaKnown RBP eCLIP19.06■□□□□ 0.64
PTPN11-201ENST00000351677 ANKRD1Q15327 319 aa19.06■□□□□ 0.64
PTPN11-201ENST00000351677 PDRG1Q9NUG6 133 aa19.06■□□□□ 0.64
PTPN11-201ENST00000351677 TTLL5Q6EMB2 1281 aa19.06■□□□□ 0.64
PTPN11-201ENST00000351677 EMILIN1Q9Y6C2 1016 aa19.06■□□□□ 0.64
PTPN11-201ENST00000351677 BLOC1S2Q6QNY1 142 aa19.05■□□□□ 0.64
PTPN11-201ENST00000351677 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.05■□□□□ 0.64
PTPN11-201ENST00000351677 DISP3Q9P2K9 1392 aa19.05■□□□□ 0.64
PTPN11-201ENST00000351677 ZC3H6P61129 1189 aaKnown RBP19.05■□□□□ 0.64
PTPN11-201ENST00000351677 PRM3Q9NNZ6 103 aa19.05■□□□□ 0.64
PTPN11-201ENST00000351677 GRIN2AQ12879 1464 aa19.05■□□□□ 0.64
PTPN11-201ENST00000351677 ANKLE2Q86XL3 938 aa19.04■□□□□ 0.64
PTPN11-201ENST00000351677 CCDC43Q96MW1 224 aaKnown RBP19.04■□□□□ 0.64
PTPN11-201ENST00000351677 CCDC57Q2TAC2 916 aa19.04■□□□□ 0.64
PTPN11-201ENST00000351677 TNMDQ9H2S6 317 aa19.04■□□□□ 0.64
PTPN11-201ENST00000351677 TEX35Q5T0J7 233 aa19.04■□□□□ 0.64
PTPN11-201ENST00000351677 LAMC3Q9Y6N6 1575 aa19.04■□□□□ 0.64
PTPN11-201ENST00000351677 ME1P48163 572 aa19.03■□□□□ 0.64
PTPN11-201ENST00000351677 KRT85P78386 507 aa19.03■□□□□ 0.64
PTPN11-201ENST00000351677 ARGLU1Q9NWB6 273 aaPredicted RBP19.03■□□□□ 0.64
PTPN11-201ENST00000351677 CCDC192P0DO97 292 aa19.03■□□□□ 0.64
PTPN11-201ENST00000351677 ALDH1L2Q3SY69 923 aa19.03■□□□□ 0.64
PTPN11-201ENST00000351677 CIZ1Q9ULV3 898 aaPredicted RBP19.03■□□□□ 0.64
PTPN11-201ENST00000351677 FAM135AQ9P2D6 1515 aa19.02■□□□□ 0.64
PTPN11-201ENST00000351677 USHBP1Q8N6Y0 703 aa19.02■□□□□ 0.64
PTPN11-201ENST00000351677 ADGRL1O94910 1474 aa19.02■□□□□ 0.64
PTPN11-201ENST00000351677 BRPF1P55201 1214 aaPredicted RBP19.02■□□□□ 0.64
PTPN11-201ENST00000351677 CCDC85AQ96PX6 553 aaPredicted RBP19.02■□□□□ 0.64
PTPN11-201ENST00000351677 CD109Q6YHK3 1445 aa19.02■□□□□ 0.63
PTPN11-201ENST00000351677 F6X3S4 739 aa19.02■□□□□ 0.63
PTPN11-201ENST00000351677 IKQ13123 557 aaPredicted RBP19.01■□□□□ 0.63
PTPN11-201ENST00000351677 LRPPRCP42704 1394 aaKnown RBP19.01■□□□□ 0.63
PTPN11-201ENST00000351677 FBXO31Q5XUX0 539 aaPredicted RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms